Non-Coding RNA Search

Ss1.1-End1-UMC-pd3end3-018-h07.3

Sequence:


               
               CCTAGCCTGAGAACTTCCATATGCTGCAGGTGAGGCCCTAAAAAGACAAAAAAGAAAGAA
AGAAAGAAAGAAATAGTTTTAGCTATCTCAGATTACCTCCTAAAATAATGCATGAACTGG
TTAAATGACTTCTCCCATCTTAGCAAATTCTGTTTAAAATTCTCAGAGACTGGTAGGCTC
TGAGTAATATTTATGAATATATTTTTTTCTGAAATTTAAAAGAGGCAGTTGCTCAGAATA
GTTTTTAAGAAAGAATTTAAATAAAATATTTAGGCAAATATCAGAAAGGACTTTTTGTTT
TGAAATAAAGTCATTTATATTTTGGTTTTATTTAGTTCCATGTTTAAATGATTTGCTTTG
AGTGGGAAAAGGCTGAATTCTTATCATGTGATTGCTGGTATGTGTAATTATAAATGAAAT
GTTCACTCTCAGCCCCTCTCAATGGTTAGAATTTCAATCACGTGTCAGGTCAAACAGTAT
TATGAACCATTATTTTGGGGTGTGAGACAGTAATGTTTTCCAATGAAGCTTGCTCCCTGC
CGTTTGTGGCCTGTTCTCTTATGAGTACTAGGTACCAAATTTTTATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTAGCCTGAGAACTTCCATATGCTGCAGGTGAGGCCCTAAAAAGACAAAAAAGAAAGAA
AGAAAGAAAGAAATAGTTTTAGCTATCTCAGATTACCTCCTAAAATAATGCATGAACTGG
TTAAATGACTTCTCCCATCTTAGCAAATTCTGTTTAAAATTCTCAGAGACTGGTAGGCTC
TGAGTAATATTTATGAATATATTTTTTTCTGAAATTTAAAAGAGGCAGTTGCTCAGAATA
GTTTTTAAGAAAGAATTTAAATAAAATATTTAGGCAAATATCAGAAAGGACTTTTTGTTT
TGAAATAAAGTCATTTATATTTTGGTTTTATTTAGTTCCATGTTTAAATGATTTGCTTTG
AGTGGGAAAAGGCTGAATTCTTATCATGTGATTGCTGGTATGTGTAATTATAAATGAAAT
GTTCACTCTCAGCCCCTCTCAATGGTTAGAATTTCAATCACGTGTCAGGTCAAACAGTAT
TATGAACCATTATTTTGGGGTGTGAGACAGTAATGTTTTCCAATGAAGCTTGCTCCCTGC
CGTTTGTGGCCTGTTCTCTTATGAGTACTAGGTACCAAATTTTTATAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               41-581, gnl|bosTau2|chr26 (17773753-17774297)
               

               
               41-581, gnl|Hg17|chr10 (105776291-105776838)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               41-581, gnl|bosTau2|chr26 (17773753-17774297)
               

               
               41-581, gnl|Hg17|chr10 (105776291-105776838)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               vin (0.332557)
               

               
               cmu (0.186393)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)
               

               
               cmu (0.186393)

	41-581, gnl\|bosTau2\|chr26 (17773753-17774297)
	41-581, gnl\|Hg17\|chr10 (105776291-105776838)