Non-Coding RNA Search

Ss1.1-End3-UMC-pd6end1-003-d02.3

Sequence:


               
               AAATCAGTTTCACCTTTGCACTGTCCAGTAACTTACTAGATACAGAGGAAGTGGTGTGAT
TTTTGAGGACATGACCATGTGACTTTGGAACCAAATTTGTAATGTAATAGAAGGAATTCC
AAATGGATAAGAGGTGATAGTATTTAAATATTTCGTGTGAGAGGAAGTGGGTTGAGGAGA
CAGCAAAGATGTAACCTTTCTAATAACCTTCTGTTACCTCTTCTTAGTTTGAGTATATTT
ATTATTAAAAGCTTATTGTAGTATAGAAATGCAAGCAGAAGAGTTAAGAAAGGGCTTTTC
AGGAACTATTCTAAAACTTGTTATGAAAGTGTCACAACCATAAGCAGAGCTTAGTTTTCT
TCATTCTCAGTTGCGACGTGCATGACAGGCCTCTTATGAGGAGAGGATTTTTCAGCATCA
GCAAAGAAAAGGTCTTTAGAGGGCTTTGAGATGATCAACCAAAATCTTTCCCCAGGGTGA
TAGGAATAAATCATATACACAATCTGAGTTGTGTTACTTTATTCTTTAAAAAGAGAGAAA
GAGGAATTCTCTCGAGGTCCAGCAGTGGCTTGGGTTGCTGCTGTGGCACAGGTTTGATCC
CTGGCCTGGGAACTTCTGCATGTCACAGGCACAACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATCAGTTTCACCTTTGCACTGTCCAGTAACTTACTAGATACAGAGGAAGTGGTGTGAT
TTTTGAGGACATGACCATGTGACTTTGGAACCAAATTTGTAATGTAATAGAAGGAATTCC
AAATGGATAAGAGGTGATAGTATTTAAATATTTCGTGTGAGAGGAAGTGGGTTGAGGAGA
CAGCAAAGATGTAACCTTTCTAATAACCTTCTGTTACCTCTTCTTAGTTTGAGTATATTT
ATTATTAAAAGCTTATTGTAGTATAGAAATGCAAGCAGAAGAGTTAAGAAAGGGCTTTTC
AGGAACTATTCTAAAACTTGTTATGAAAGTGTCACAACCATAAGCAGAGCTTAGTTTTCT
TCATTCTCAGTTGCGACGTGCATGACAGGCCTCTTATGAGGAGAGGATTTTTCAGCATCA
GCAAAGAAAAGGTCTTTAGAGGGCTTTGAGATGATCAACCAAAATCTTTCCCCAGGGTGA
TAGGAATAAATCATATACACAATCTGAGTTGTGTTACTTTATTCTTTAAAAAGAGAGAAA
GAGGAATTCTCTCGAGGTCCAGCAGTGGCTTGGGTTGCTGCTGTGGCACAGGTTTGATCC
CTGGCCTGGGAACTTCTGCATGTCACAGGCACAACC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               5-534, gnl|bosTau2|chr18 (35650666-35650112)
               

               
               5-534, gnl|Hg17|chr19 (37565880-37566427)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-534, gnl|bosTau2|chr18 (35650666-35650112)
               

               
               5-534, gnl|Hg17|chr19 (37565880-37566427)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sme (0.305437)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.305437)

	5-534, gnl\|bosTau2\|chr18 (35650666-35650112)
	5-534, gnl\|Hg17\|chr19 (37565880-37566427)