Non-Coding RNA Search

Ss1.1-End3-UMC-pd6end1-009-d07.3

Sequence:


               
               GCAAATTATTTGTTGTTGGGCTGCCATGCATTACAGTTGCAGTTTCTGCATTTTTTTCAG
TGAGCCTTCTCATTGGCTGCTTTTAAAAATACGATTGGCCATGTTGTTCCACAAAGGGAA
ATGTTAAGCAAAGCAGTAGTGACCTTATGTTTTTAATCATAAAAAACAAACTGGAAATAA
TGCTGAAAATGAAATCTGAGATAATTTTAAGCAGAGAAAAACATAATATTTCCGTATAAG
CTTTCTTCGTAAATGTTCTTTACTGCATAGACTTTCTGATGTACTGGTATTTCTTCTTTT
GTGAATCATGTATTTCTCATCTTATCTTGTAAATGGTGATTTCTGATAGGCTACAAAAGC
CTCACCTTTACCTCTGATCATCAGCATTTCCCTGTTGACGTTGATTTTGTGTTTGTTCTC
CAGAAATTTGTGTTGTAAATAGGAATGTAGCAGTAATACAGACAGCCAAACATTGTGCAG
TCAAACTTGAAAGTGTCTGATTACTAAAGGTTGAGGTTTTGGTGGGAGAAATATTGCAAA
AGATTCTGCTCTCTCTATTTTAACTGAAAATATAGCTTCGGCGAACAGTTTTCTTAAGTG
AAGGAAAAATTGCAGACCACAAATTTATGGTTTCTGTCTTCTTATTTCTTAATAACAAGC
CTGTACATCTACTCCTCCCTTAAAATGACATAAAATTAAATAAAACAACCATTTATTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAAATTATTTGTTGTTGGGCTGCCATGCATTACAGTTGCAGTTTCTGCATTTTTTTCAG
TGAGCCTTCTCATTGGCTGCTTTTAAAAATACGATTGGCCATGTTGTTCCACAAAGGGAA
ATGTTAAGCAAAGCAGTAGTGACCTTATGTTTTTAATCATAAAAAACAAACTGGAAATAA
TGCTGAAAATGAAATCTGAGATAATTTTAAGCAGAGAAAAACATAATATTTCCGTATAAG
CTTTCTTCGTAAATGTTCTTTACTGCATAGACTTTCTGATGTACTGGTATTTCTTCTTTT
GTGAATCATGTATTTCTCATCTTATCTTGTAAATGGTGATTTCTGATAGGCTACAAAAGC
CTCACCTTTACCTCTGATCATCAGCATTTCCCTGTTGACGTTGATTTTGTGTTTGTTCTC
CAGAAATTTGTGTTGTAAATAGGAATGTAGCAGTAATACAGACAGCCAAACATTGTGCAG
TCAAACTTGAAAGTGTCTGATTACTAAAGGTTGAGGTTTTGGTGGGAGAAATATTGCAAA
AGATTCTGCTCTCTCTATTTTAACTGAAAATATAGCTTCGGCGAACAGTTTTCTTAAGTG
AAGGAAAAATTGCAGACCACAAATTTATGGTTTCTGTCTTCTTATTTCTTAATAACAAGC
CTGTACATCTACTCCTCCCTTAAAATGACATAAAATTAAATAAAACAACCATTTATTAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-300, gnl|bosTau2|chr8 (26029716-26029411)
               

               
               1-300, gnl|Hg17|chr9 (74993443-74994081)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-300, gnl|bosTau2|chr8 (26029716-26029411)
               

               
               1-300, gnl|Hg17|chr9 (74993443-74994081)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tra (0.123092)
               

               
               nbm (0.0993246)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tra (0.123092)
               

               
               nbm (0.0993246)

	1-300, gnl\|bosTau2\|chr8 (26029716-26029411)
	1-300, gnl\|Hg17\|chr9 (74993443-74994081)