Non-Coding RNA Search

Ss1.1-Fat1-PT27D11.5.5

Sequence:


               
               GCGTTTTCTCTCCTCCTGGCCCTTCTTTTTTAAAGGGTAAAACATTAATGTTTAGAATGG
CAAAGAAGAATTATTGTCGTTAAGTCCAGTGTACACCAGCTAAAACAAAACAAAAAACCC
CAACCTAAAGAAAGCATGGGGGGAAATTGTAGCTGGTTTTGTTAACACTTCATCCTGTCC
ATGTTATGTTGGTGGAAATGGTTATTTCATTCTTTAATTACTGTTTTGTTTTATCCTTTG
TATCTGAAATACCTTTAATTTATTTAATATCCATCGTTTAGAGCTCTGCCACTTCCCGAG
GACCTGTTAGTTACTAGTATTTATGTGTATCAGGAGTGTTAAGTATATTTTATTTGCAGT
AAACTGATCTCCAAAGATTTTTTTTTTTTTTTTTTGAATGCTCCCCCTCCCTTAATTTTT
TACATTCCTTACTTAATGTTTTACTAAGTATTAAGTGTTCTTTGACAATTTTGGTGCTCA
CGTGTTTGGGGGACAAAAGTGAAATGAATCTGTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGTTTTCTCTCCTCCTGGCCCTTCTTTTTTAAAGGGTAAAACATTAATGTTTAGAATGG
CAAAGAAGAATTATTGTCGTTAAGTCCAGTGTACACCAGCTAAAACAAAACAAAAAACCC
CAACCTAAAGAAAGCATGGGGGGAAATTGTAGCTGGTTTTGTTAACACTTCATCCTGTCC
ATGTTATGTTGGTGGAAATGGTTATTTCATTCTTTAATTACTGTTTTGTTTTATCCTTTG
TATCTGAAATACCTTTAATTTATTTAATATCCATCGTTTAGAGCTCTGCCACTTCCCGAG
GACCTGTTAGTTACTAGTATTTATGTGTATCAGGAGTGTTAAGTATATTTTATTTGCAGT
AAACTGATCTCCAAAGATTTTTTTTTTTTTTTTTTGAATGCTCCCCCTCCCTTAATTTTT
TACATTCCTTACTTAATGTTTTACTAAGTATTAAGTGTTCTTTGACAATTTTGGTGCTCA
CGTGTTTGGGGGACAAAAGTGAAATGAATCTGTTGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               5-513, gnl|bosTau2|chr21 (2825320-2825813)
               

               
               5-513, gnl|Hg17|chr15 (99534205-99533716)
               

               
               5-513, gnl|Mm7|chr7 (62031109-62031570)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-513, gnl|bosTau2|chr21 (2825320-2825813)
               

               
               5-513, gnl|Hg17|chr15 (99534205-99533716)
               

               
               5-513, gnl|Mm7|chr7 (62031109-62031570)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               bla (0.124347)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)

	5-513, gnl\|bosTau2\|chr21 (2825320-2825813)
	5-513, gnl\|Hg17\|chr15 (99534205-99533716)
	5-513, gnl\|Mm7\|chr7 (62031109-62031570)