Ss1.1-Liv1-LVR010005A11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTCCGCTGGCGGAGGCTCTGGCGGTGGCGGCGCGCGAGCGCGAGCGATCCCGACCCCACA TTCCTGGGAGCGCGGAATATCTTGGGATCTTCTCTGATCTGCCAGCAGCCAAGGTGTTCA CTGGAAATTCAAGGAAAACAGAATTTAAGAAGTGCAACATGGCCAGGGGCTGCCTCTGCT GCTTGAAGTACATGATGTTCCTCTTCAATTTGATATTCTGGCTCTGTGGCTGTGGGCTGC TTGGAGTGGGCATTTGGCTCTCCGTGTCCCAAGGCAACTTTGCCACCTTCTCCCCCAGCT TCCCCTCGCTGTCTGCAGCCAACCTCGTCATCGCCATAGGCACCATCGTCATGGTGACGG GCTTCCTGGGCTGCCTGGGGGCCATCAAGGAGAACAGGTGCCTCCTCCTCAGTTTTTTCA TCGTCCTGTTGATCATCCTCCTGGCGGAGCTGATCTTAATTATCCTCTTCTTTGTCTACA TGGACAAGGTGAACGAGAATGCCAGGAAGGACCTCAAGGAAGGTCTGCTGCTGTACAACT CGGAGAACAACGTGGGGCTTAAGAACGCCTGGAACATCATCCAGGCCGAGATGCACTGCT GTGGCGTTACCGACTATACAGACTGGTACCCCGTGCTGGGGGAGAACACGGTTCCTGACC GCTGTTGCATGGAGAACTCCCAGGGCTGCGGCCGCAACAGCACCACCCCGCTTTGGAAGA CGGGCTGCTACGAAAAGGTGAAGATGTGGTTTGACGACAATAAGCACGTGCTTGGCACGG TGGGCATGTGCATCCTGATCATGCAGATCCTGGGCATGGCCTTCTCCATGACCCTCTTCC AGCACATCCACCGGACTGGGAAAAAGTACGACGCCTGAGCGGGCTGGCCGCGCGCCCCGG CCCACGCGGACACTGTGCCAGGGAGGAAGACTTCAGCTGTGTGTCGCCTGCCCACAGCCT GCAGACTGCTGACCTCTGCGCCCACCTCCCGGGTCCGCCTCTCGCCACCTGCCTGGGCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTCCGCTGGCGGAGGCTCTGGCGGTGGCGGCGCGCGAGCGCGAGCGATCCCGACCCCACA TTCCTGGGAGCGCGGAATATCTTGGGATCTTCTCTGATCTGCCAGCAGCCAAGGTGTTCA CTGGAAATTCAAGGAAAACAGAATTTAAGAAGTGCAACATGGCCAGGGGCTGCCTCTGCT GCTTGAAGTACATGATGTTCCTCTTCAATTTGATATTCTGGCTCTGTGGCTGTGGGCTGC TTGGAGTGGGCATTTGGCTCTCCGTGTCCCAAGGCAACTTTGCCACCTTCTCCCCCAGCT TCCCCTCGCTGTCTGCAGCCAACCTCGTCATCGCCATAGGCACCATCGTCATGGTGACGG GCTTCCTGGGCTGCCTGGGGGCCATCAAGGAGAACAGGTGCCTCCTCCTCAGTTTTTTCA TCGTCCTGTTGATCATCCTCCTGGCGGAGCTGATCTTAATTATCCTCTTCTTTGTCTACA TGGACAAGGTGAACGAGAATGCCAGGAAGGACCTCAAGGAAGGTCTGCTGCTGTACAACT CGGAGAACAACGTGGGGCTTAAGAACGCCTGGAACATCATCCAGGCCGAGATGCACTGCT GTGGCGTTACCGACTATACAGACTGGTACCCCGTGCTGGGGGAGAACACGGTTCCTGACC GCTGTTGCATGGAGAACTCCCAGGGCTGCGGCCGCAACAGCACCACCCCGCTTTGGAAGA CGGGCTGCTACGAAAAGGTGAAGATGTGGTTTGACGACAATAAGCACGTGCTTGGCACGG TGGGCATGTGCATCCTGATCATGCAGATCCTGGGCATGGCCTTCTCCATGACCCTCTTCC AGCACATCCACCGGACTGGGAAAAAGTACGACGCCTGAGCGGGCTGGCCGCGCGCCCCGG CCCACGCGGACACTGTGCCAGGGAGGAAGACTTCAGCTGTGTGTCGCCTGCCCACAGCCT GCAGACTGCTGACCTCTGCGCCCACCTCCCGGGTCCGCCTCTCGCCACCTGCCTGGGCCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 221-411, gnl|bosTau2|chr18 (54556410-54556221) | |
| 221-411, gnl|Hg17|chr11 (852549-852739) | |
| 221-411, gnl|Mm7|chr7 (137906815-137907005) | |
| 589-723, gnl|bosTau2|chr5 (64479222-64479088) | |
| 589-723, gnl|canFam2|chr27 (44563845-44563697) | |
| 589-723, gnl|danRer3|chr4 (10181646-10181791) | |
| 589-723, gnl|echTel1|scaffold_234125 (2756-2904) | |
| 589-723, gnl|fr1|chrUn (76879691-76879834) | |
| 589-723, gnl|galGal2|chr1 (69003483-69003618) | |
| 589-723, gnl|hg17|chr12 (3260619-3260777) | |
| 589-723, gnl|Hg17|chr12 (3260623-3260757) | |
| 589-723, gnl|loxAfr1|scaffold_129511 (1221-1071) | |
| 589-723, gnl|mm7|chr6 (127989074-127988935) | |
| 589-723, gnl|Mm7|chr6 (127989071-127988937) | |
| 589-723, gnl|monDom2|scaffold_31 (22898288-22898130) | |
| 589-723, gnl|oryCun1|scaffold_211815 (17822-17967) | |
| 589-723, gnl|panTro1|chr10 (3345129-3345287) | |
| 589-723, gnl|rheMac2|chr11 (3406838-3406996) | |
| 589-723, gnl|rn3|chr4 (164665640-164665485) | |
| 589-723, gnl|tetNig1|chr13 (1997108-1997238) | |
| 589-723, gnl|xenTro1|scaffold_432 (540969-540825) | |
| 799-1020, gnl|bosTau2|chr5 (64477728-64477512) | |
| 799-1020, gnl|Hg17|chr12 (3262464-3262690) | |
| 799-1020, gnl|Mm7|chr6 (127987746-127987524) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 221-411, gnl|bosTau2|chr18 (54556410-54556221) | |
| 221-411, gnl|Hg17|chr11 (852549-852739) | |
| 221-411, gnl|Mm7|chr7 (137906815-137907005) | |
| 589-723, gnl|bosTau2|chr5 (64479222-64479088) | |
| 589-723, gnl|canFam2|chr27 (44563845-44563697) | |
| 589-723, gnl|danRer3|chr4 (10181646-10181791) | |
| 589-723, gnl|echTel1|scaffold_234125 (2756-2904) | |
| 589-723, gnl|fr1|chrUn (76879691-76879834) | |
| 589-723, gnl|galGal2|chr1 (69003483-69003618) | |
| 589-723, gnl|hg17|chr12 (3260619-3260777) | |
| 589-723, gnl|Hg17|chr12 (3260623-3260757) | |
| 589-723, gnl|loxAfr1|scaffold_129511 (1221-1071) | |
| 589-723, gnl|mm7|chr6 (127989074-127988935) | |
| 589-723, gnl|Mm7|chr6 (127989071-127988937) | |
| 589-723, gnl|monDom2|scaffold_31 (22898288-22898130) | |
| 589-723, gnl|oryCun1|scaffold_211815 (17822-17967) | |
| 589-723, gnl|panTro1|chr10 (3345129-3345287) | |
| 589-723, gnl|rheMac2|chr11 (3406838-3406996) | |
| 589-723, gnl|rn3|chr4 (164665640-164665485) | |
| 589-723, gnl|tetNig1|chr13 (1997108-1997238) | |
| 589-723, gnl|xenTro1|scaffold_432 (540969-540825) | |
| 799-1020, gnl|bosTau2|chr5 (64477728-64477512) | |
| 799-1020, gnl|Hg17|chr12 (3262464-3262690) | |
| 799-1020, gnl|Mm7|chr6 (127987746-127987524) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.267344) |