Ss1.1-Liv1-LVR010005C10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGTTGCCCGGAGACGGAAAGTTTGGGAGCCAGAGCAGGCTCCGCGGCGGCCCCGGGGAGG AGGTCCGGGGGGCGGCGGCCCTGGGGATGGGGAAAGAGCAGGAGCTGCTGGAGGCCGCCC GCACCGGGCACCTCCCGGCCGTGGAGAAGCTGCTGTCCGGGAAGCGGCTCTCCTCAGGCT TCGGGGGTGGCGGCGGCGGTGGCGGCGGCTCCGGGGGCGGCAGCAGCGGCGGCGGCGGTC TAAGCTCCTCGAGCCATCCTCTGTCCAGTCTGCTCAGCATCTGGCGAGGGCCCAATGTGA ACTGTGTGGACAGCACTGGGTATACACCTCTGCATCATGCTGCTCTGAATGGCCATAAGG ATGTGGTCGAGGTTCTTCTGCGGAATGACGCGCTGACCAACGTGGCTGACTGTAAAGGCT GTTACCCTCTGCACTTGGCAGCCTGGAAAGGAGATGCCCAGATAGTGCGGCTGCTCATCC ATCAAGGGCCGTCACACACCAAAGTCAATGAACAGAACAATGACAACGAGACAGCCCTAC ATTGCGCGGCGCAGTATGGCCACACGGAGGTGGTGAAGGTCCTCCTCGAGGAGCTCACCG ACCCTACCATGCGCAACAACAAGTTCGAGACCCCGCTGGACCTGGCGGCGCTCTACGGGA GGCTGGACGTGGTGAAGATGCTCCTCAATGCGCACCCCAACCTCCTGAGCTGCAACACCA AGAAGCACACCCCGCTGCACTTGGCGGCGAGGAATGGCCACCGGGCTGTGGTCCAGGTCC TCCTGGACGCTGGCATGGACAGCAACTATCAGACGGAGAAAGGCAGTGCTTTGCATGAGG CTGCTTTGTTTGGCAAGACCGATGTGGTGCAAATCCTGCTGGCTGCAGGAATTGACGTCA ACATAAAAGACAACCGCGGCCTGACTGCCCTGGACACTGTCAGGGAGCTGCCTTCTCAGA AGAGCCAGCAGATAGCAGCGCTTATTGAAGATCACATGACTGGAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGTTGCCCGGAGACGGAAAGTTTGGGAGCCAGAGCAGGCTCCGCGGCGGCCCCGGGGAGG AGGTCCGGGGGGCGGCGGCCCTGGGGATGGGGAAAGAGCAGGAGCTGCTGGAGGCCGCCC GCACCGGGCACCTCCCGGCCGTGGAGAAGCTGCTGTCCGGGAAGCGGCTCTCCTCAGGCT TCGGGGGTGGCGGCGGCGGTGGCGGCGGCTCCGGGGGCGGCAGCAGCGGCGGCGGCGGTC TAAGCTCCTCGAGCCATCCTCTGTCCAGTCTGCTCAGCATCTGGCGAGGGCCCAATGTGA ACTGTGTGGACAGCACTGGGTATACACCTCTGCATCATGCTGCTCTGAATGGCCATAAGG ATGTGGTCGAGGTTCTTCTGCGGAATGACGCGCTGACCAACGTGGCTGACTGTAAAGGCT GTTACCCTCTGCACTTGGCAGCCTGGAAAGGAGATGCCCAGATAGTGCGGCTGCTCATCC ATCAAGGGCCGTCACACACCAAAGTCAATGAACAGAACAATGACAACGAGACAGCCCTAC ATTGCGCGGCGCAGTATGGCCACACGGAGGTGGTGAAGGTCCTCCTCGAGGAGCTCACCG ACCCTACCATGCGCAACAACAAGTTCGAGACCCCGCTGGACCTGGCGGCGCTCTACGGGA GGCTGGACGTGGTGAAGATGCTCCTCAATGCGCACCCCAACCTCCTGAGCTGCAACACCA AGAAGCACACCCCGCTGCACTTGGCGGCGAGGAATGGCCACCGGGCTGTGGTCCAGGTCC TCCTGGACGCTGGCATGGACAGCAACTATCAGACGGAGAAAGGCAGTGCTTTGCATGAGG CTGCTTTGTTTGGCAAGACCGATGTGGTGCAAATCCTGCTGGCTGCAGGAATTGACGTCA ACATAAAAGACAACCGCGGCCTGACTGCCCTGGACACTGTCAGGGAGCTGCCTTCTCAGA AGAGCCAGCAGATAGCAGCGCTTATTGAAGATCACATGACTGGAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 1-277, gnl|bosTau2|chr23 (9035369-9035663) | |
| 1-277, gnl|Hg17|chr6 (34965072-34965354) | |
| 1-277, gnl|Mm7|chr17 (26095009-26095277) | |
| 514-812, gnl|bosTau2|chr23 (9117019-9117317) | |
| 514-812, gnl|canFam2|chr12 (7180868-7181126) | |
| 514-812, gnl|danRer3|chr23 (272514-272268) | |
| 514-812, gnl|dasNov1|scaffold_3638 (107276-107019) | |
| 514-812, gnl|echTel1|scaffold_314403 (80447-80190) | |
| 514-812, gnl|fr1|chrUn (70278735-70278478) | |
| 514-812, gnl|galGal2|chr26 (2805100-2804841) | |
| 514-812, gnl|hg17|chr6 (35057428-35057685) | |
| 514-812, gnl|Hg17|chr6 (35057443-35057741) | |
| 514-812, gnl|loxAfr1|scaffold_166685 (1154-897) | |
| 514-812, gnl|mm7|chr17 (26170681-26170937) | |
| 514-812, gnl|Mm7|chr17 (26170695-26170993) | |
| 514-812, gnl|monDom2|scaffold_42 (12217362-12217104) | |
| 514-812, gnl|oryCun1|scaffold_211025 (55619-55362) | |
| 514-812, gnl|panTro1|chr5 (35513079-35513336) | |
| 514-812, gnl|rheMac2|chr4 (34702657-34702914) | |
| 514-812, gnl|rn3|chr20 (6198017-6198273) | |
| 514-812, gnl|tetNig1|chr9 (7833407-7833152) | |
| 514-812, gnl|xenTro1|scaffold_806 (188811-189064) | |
| 887-990, gnl|bosTau2|chr23 (9118517-9118620) | |
| 887-990, gnl|canFam2|chr12 (7182306-7182394) | |
| 887-990, gnl|danRer3|chr23 (270389-270304) | |
| 887-990, gnl|dasNov1|scaffold_96888 (7472-7391) | |
| 887-990, gnl|echTel1|scaffold_314403 (79052-78964) | |
| 887-990, gnl|galGal2|chr26 (2803853-2803770) | |
| 887-990, gnl|hg17|chr6 (35058856-35058944) | |
| 887-990, gnl|Hg17|chr6 (35058866-35058969) | |
| 887-990, gnl|loxAfr1|scaffold_85687 (30002-29921) | |
| 887-990, gnl|mm7|chr17 (26172171-26172258) | |
| 887-990, gnl|Mm7|chr17 (26172180-26172283) | |
| 887-990, gnl|monDom2|scaffold_42 (12215510-12215422) | |
| 887-990, gnl|oryCun1|scaffold_211025 (54198-54110) | |
| 887-990, gnl|panTro1|chr5 (35514507-35514595) | |
| 887-990, gnl|rheMac2|chr4 (34704094-34704182) | |
| 887-990, gnl|rn3|chr20 (6199285-6199372) | |
| 887-990, gnl|tetNig1|chr19 (1729936-1730021) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-277, gnl|bosTau2|chr23 (9035369-9035663) | |
| 1-277, gnl|Hg17|chr6 (34965072-34965354) | |
| 1-277, gnl|Mm7|chr17 (26095009-26095277) | |
| 514-812, gnl|bosTau2|chr23 (9117019-9117317) | |
| 514-812, gnl|canFam2|chr12 (7180868-7181126) | |
| 514-812, gnl|danRer3|chr23 (272514-272268) | |
| 514-812, gnl|dasNov1|scaffold_3638 (107276-107019) | |
| 514-812, gnl|echTel1|scaffold_314403 (80447-80190) | |
| 514-812, gnl|fr1|chrUn (70278735-70278478) | |
| 514-812, gnl|galGal2|chr26 (2805100-2804841) | |
| 514-812, gnl|hg17|chr6 (35057428-35057685) | |
| 514-812, gnl|Hg17|chr6 (35057443-35057741) | |
| 514-812, gnl|loxAfr1|scaffold_166685 (1154-897) | |
| 514-812, gnl|mm7|chr17 (26170681-26170937) | |
| 514-812, gnl|Mm7|chr17 (26170695-26170993) | |
| 514-812, gnl|monDom2|scaffold_42 (12217362-12217104) | |
| 514-812, gnl|oryCun1|scaffold_211025 (55619-55362) | |
| 514-812, gnl|panTro1|chr5 (35513079-35513336) | |
| 514-812, gnl|rheMac2|chr4 (34702657-34702914) | |
| 514-812, gnl|rn3|chr20 (6198017-6198273) | |
| 514-812, gnl|tetNig1|chr9 (7833407-7833152) | |
| 514-812, gnl|xenTro1|scaffold_806 (188811-189064) | |
| 887-990, gnl|bosTau2|chr23 (9118517-9118620) | |
| 887-990, gnl|canFam2|chr12 (7182306-7182394) | |
| 887-990, gnl|danRer3|chr23 (270389-270304) | |
| 887-990, gnl|dasNov1|scaffold_96888 (7472-7391) | |
| 887-990, gnl|echTel1|scaffold_314403 (79052-78964) | |
| 887-990, gnl|galGal2|chr26 (2803853-2803770) | |
| 887-990, gnl|hg17|chr6 (35058856-35058944) | |
| 887-990, gnl|Hg17|chr6 (35058866-35058969) | |
| 887-990, gnl|loxAfr1|scaffold_85687 (30002-29921) | |
| 887-990, gnl|mm7|chr17 (26172171-26172258) | |
| 887-990, gnl|Mm7|chr17 (26172180-26172283) | |
| 887-990, gnl|monDom2|scaffold_42 (12215510-12215422) | |
| 887-990, gnl|oryCun1|scaffold_211025 (54198-54110) | |
| 887-990, gnl|panTro1|chr5 (35514507-35514595) | |
| 887-990, gnl|rheMac2|chr4 (34704094-34704182) | |
| 887-990, gnl|rn3|chr20 (6199285-6199372) | |
| 887-990, gnl|tetNig1|chr19 (1729936-1730021) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lnt (0.142308) |