Non-Coding RNA Search

Ss1.1-Liv1-LVR010017C08.5

Sequence:


               
               TGGACTGGCCCCGGCAGAGAGTCGTCTGGGGGCCTGACTTTCGCCCTCGACAGTGCTTCT
CCGGCCTTGCTGCTCAGGGGGTCCCAGGGCCTTGCAGGAGGAGAGGGGGCAAACACCTGC
CCGCCTCAGCGCCCTGTCAGTTGGGCTTGAGCTTGGGGCTCTGGGAGACCGACAGGGAGA
TGAGGACCTGGGCGGAATAATACGTGGTCATGACCACCAGGCGGGCGTGGGGCAGGGGCT
GGGCAAAGGCGTTCCAGGCCAGCATGGTATCCGAAAGCGTGAAGAGCAGCGCGCCCCAGC
CGGTGCTCCCGCCCCTGGCCAGGCCACGCCACAGCATGGTGGCCAGGGCCAAGGAGTAAG
CCGTCAGGGCCAGGACCAGGTCGGGCGGGAGGTGCCAAAGCAGGAGGCCGTAGTACGGGA
GAGCGGCCAGGATGACCAGGAGCAGGAGGCCGGGCTGCAGGGGCGTCAGGCCAAAGGCCC
AGAGGTAGAGCAGGTGGGCCGCGGCGAAGGCGGCCACGCCATGGAGAAAGGCCTCGGGCC
AGACGAGGCAGGCGTCCCCCACGGCTGAGCACAGGAGGGCCCCCTGCAGCCGCGCGCTGT
AGCCCCCGCTGGCGTCCACGGCCCGCAGGAATACCACCAGGGAGAGGACGGGCAGGCACT
TGACCAGGGCGCCGACCCAGGACGGCTGGTCGTCGGGGATCCAGAGGAGGAAGTAGACGG
CGCAGGTGAAGAAGAAGGGGCTCAGCCACTTGCCCACGTGCAGCTGCTTCAGGGGACCAG
GGGGCTGCTGAGCCCTAGAAACCAGCCTTGAGCTGAAAAGCGAGGTTTTCGGGGCAGGCC
CTCTTTCCCGGGGTCCATGTCAGCCTGTGACCCCTGAGAACGGCCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGACTGGCCCCGGCAGAGAGTCGTCTGGGGGCCTGACTTTCGCCCTCGACAGTGCTTCT
CCGGCCTTGCTGCTCAGGGGGTCCCAGGGCCTTGCAGGAGGAGAGGGGGCAAACACCTGC
CCGCCTCAGCGCCCTGTCAGTTGGGCTTGAGCTTGGGGCTCTGGGAGACCGACAGGGAGA
TGAGGACCTGGGCGGAATAATACGTGGTCATGACCACCAGGCGGGCGTGGGGCAGGGGCT
GGGCAAAGGCGTTCCAGGCCAGCATGGTATCCGAAAGCGTGAAGAGCAGCGCGCCCCAGC
CGGTGCTCCCGCCCCTGGCCAGGCCACGCCACAGCATGGTGGCCAGGGCCAAGGAGTAAG
CCGTCAGGGCCAGGACCAGGTCGGGCGGGAGGTGCCAAAGCAGGAGGCCGTAGTACGGGA
GAGCGGCCAGGATGACCAGGAGCAGGAGGCCGGGCTGCAGGGGCGTCAGGCCAAAGGCCC
AGAGGTAGAGCAGGTGGGCCGCGGCGAAGGCGGCCACGCCATGGAGAAAGGCCTCGGGCC
AGACGAGGCAGGCGTCCCCCACGGCTGAGCACAGGAGGGCCCCCTGCAGCCGCGCGCTGT
AGCCCCCGCTGGCGTCCACGGCCCGCAGGAATACCACCAGGGAGAGGACGGGCAGGCACT
TGACCAGGGCGCCGACCCAGGACGGCTGGTCGTCGGGGATCCAGAGGAGGAAGTAGACGG
CGCAGGTGAAGAAGAAGGGGCTCAGCCACTTGCCCACGTGCAGCTGCTTCAGGGGACCAG
GGGGCTGCTGAGCCCTAGAAACCAGCCTTGAGCTGAAAAGCGAGGTTTTCGGGGCAGGCC
CTCTTTCCCGGGGTCCATGTCAGCCTGTGACCCCTGAGAACGGCCTGC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q8N661_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8N661_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-520, gnl|bosTau2|chr18 (52980357-52979845)
               

               
               1-520, gnl|Hg17|chr19 (60430218-60430744)
               

               
               1-520, gnl|Mm7|chr7 (4201616-4202118)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-520, gnl|bosTau2|chr18 (52980357-52979845)
               

               
               1-520, gnl|Hg17|chr19 (60430218-60430744)
               

               
               1-520, gnl|Mm7|chr7 (4201616-4202118)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nje (0.16592)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)
               

               
               jej (0.0989218)

	1-520, gnl\|bosTau2\|chr18 (52980357-52979845)
	1-520, gnl\|Hg17\|chr19 (60430218-60430744)
	1-520, gnl\|Mm7\|chr7 (4201616-4202118)