Ss1.1-Liv1-LVR010038C06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGTGTGGGGGACCCAAGTCGTGGGCTTGGAACCATTTTCTGGCCAGAGCATTCTCCTCC CTTCTCTGCCTCGGTCGTCAGTTCCCCGTGGCTCTGGGGGGCATGTTCAGGAATGCAGCG GCCATCTGTTTGCACCTGGTGGGGCCCCTCCGGGGACAGAAGTCGGGAGCTTCGCTCACT CGGTGCTTGCACCAGACTCTCGCCATGGCCAAGCGGCTGCAGGCTCGACGGCTGGACGGG ATCGACCACAACCCGTGGGTGGAGTTTGTCAAACTGGCCAGCGAGGCGGATGTCGTGAAC TTGGGCCAAGGCTTCCCCGACTTCCCACCCCCAGACTTTGCCTTGGAAGCCTTTCAGCAC GCCGTCAGCGGAGACTTCATGCTGAACCAGTACACGAAGGCCTTCGGTTACCCACCCCTG ACAAAGATCCTGGCCAGTTTCTTCGGAAAGTTGCTGGGACAGGAGTTAGATCCACTGAAG AACGTACTGGTGACTGTGGGTGCCTACGGGGCCCTGTTCACGGCTTTCCAGGCCCTGGTG GATGAAGGAGATGAGGTCATCATCATTGAGCCCTTTTTCGACTGCTATGAGCCCATGACG TTGATGGCAGGGGGTCTCCCTGTGTTTGTGTCCTTGAAGCCGAGCCCCGCCCAGGACGGG GAACTGGATTCCAGCAGCAACTGGCAGCTGGACCCCATGGAGCTGGCCAGCAAGTTCACG CCTCGCACCAAAGCCCTGGTCCTCAACACACCCAACAACCCCCTGGGCAAGGTGTTCTCC AAGCCAGAACTGGAGCTGGTGGCCAGCCTGTGCCAGCAGCATGACGTGGTGTGCATCGCC GACGAGGTCTACCAGTGGCTGGTCTACGACCAGTACCAGCACATCAGCATCGCCAGCCTC CCCGGCATGTGGGAACGCACCCTGACTGTTGGCAGCGCTGGCAAGACCTTTAGTGCCACG GGCTGGAAGGTGGGCTGGGTCCTGGGCCCGGACCGTCTCCTGAGGCACCTGCGCACCGTG CACCAGAACTCTGTCTTTCACTGTCCCACGCAGGCCCAGGCCGCCGTCGCCCAGAGCTTT GAGCGGGAGCAGCTGCACTTTGGCCAGCCCAGCAGCTACTTTGTACAGCTCCCGCAGGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGTGTGGGGGACCCAAGTCGTGGGCTTGGAACCATTTTCTGGCCAGAGCATTCTCCTCC CTTCTCTGCCTCGGTCGTCAGTTCCCCGTGGCTCTGGGGGGCATGTTCAGGAATGCAGCG GCCATCTGTTTGCACCTGGTGGGGCCCCTCCGGGGACAGAAGTCGGGAGCTTCGCTCACT CGGTGCTTGCACCAGACTCTCGCCATGGCCAAGCGGCTGCAGGCTCGACGGCTGGACGGG ATCGACCACAACCCGTGGGTGGAGTTTGTCAAACTGGCCAGCGAGGCGGATGTCGTGAAC TTGGGCCAAGGCTTCCCCGACTTCCCACCCCCAGACTTTGCCTTGGAAGCCTTTCAGCAC GCCGTCAGCGGAGACTTCATGCTGAACCAGTACACGAAGGCCTTCGGTTACCCACCCCTG ACAAAGATCCTGGCCAGTTTCTTCGGAAAGTTGCTGGGACAGGAGTTAGATCCACTGAAG AACGTACTGGTGACTGTGGGTGCCTACGGGGCCCTGTTCACGGCTTTCCAGGCCCTGGTG GATGAAGGAGATGAGGTCATCATCATTGAGCCCTTTTTCGACTGCTATGAGCCCATGACG TTGATGGCAGGGGGTCTCCCTGTGTTTGTGTCCTTGAAGCCGAGCCCCGCCCAGGACGGG GAACTGGATTCCAGCAGCAACTGGCAGCTGGACCCCATGGAGCTGGCCAGCAAGTTCACG CCTCGCACCAAAGCCCTGGTCCTCAACACACCCAACAACCCCCTGGGCAAGGTGTTCTCC AAGCCAGAACTGGAGCTGGTGGCCAGCCTGTGCCAGCAGCATGACGTGGTGTGCATCGCC GACGAGGTCTACCAGTGGCTGGTCTACGACCAGTACCAGCACATCAGCATCGCCAGCCTC CCCGGCATGTGGGAACGCACCCTGACTGTTGGCAGCGCTGGCAAGACCTTTAGTGCCACG GGCTGGAAGGTGGGCTGGGTCCTGGGCCCGGACCGTCTCCTGAGGCACCTGCGCACCGTG CACCAGAACTCTGTCTTTCACTGTCCCACGCAGGCCCAGGCCGCCGTCGCCCAGAGCTTT GAGCGGGAGCAGCTGCACTTTGGCCAGCCCAGCAGCTACTTTGTACAGCTCCCGCAGGCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 65 entry(ies) | More info |
| Aligned organism(s): 65 entry(ies) | Help | Less info |
| 9-198, gnl|bosTau2|chr11 (78678504-78678314) | |
| 9-198, gnl|canFam2|chr9 (58128495-58128292) | |
| 9-198, gnl|hg17|chr9 (128689250-128689463) | |
| 9-198, gnl|Hg17|chr9 (128689459-128689266) | |
| 9-198, gnl|mm7|chr2 (30205254-30205459) | |
| 9-198, gnl|Mm7|chr2 (30205457-30205268) | |
| 9-198, gnl|monDom2|scaffold_51 (3409931-3410139) | |
| 9-198, gnl|oryCun1|scaffold_175208 (38012-37805) | |
| 9-198, gnl|panTro1|chr11 (113528352-113528565) | |
| 9-198, gnl|rheMac2|chr15 (10004968-10004755) | |
| 9-198, gnl|rn3|chr3 (9209736-9209947) | |
| 257-404, gnl|bosTau2|chr11 (78673743-78673593) | |
| 257-404, gnl|canFam2|chr9 (58133963-58133832) | |
| 257-404, gnl|danRer3|chrNA (179800308-179800192) | |
| 257-404, gnl|dasNov1|scaffold_169141 (1116-1247) | |
| 257-404, gnl|echTel1|scaffold_194011 (4261-4130) | |
| 257-404, gnl|fr1|chrUn (287809422-287809542) | |
| 257-404, gnl|galGal2|chr17 (5463968-5463843) | |
| 257-404, gnl|hg17|chr9 (128684470-128684601) | |
| 257-404, gnl|Hg17|chr9 (128684635-128684488) | |
| 257-404, gnl|mm7|chr2 (30199220-30199350) | |
| 257-404, gnl|Mm7|chr2 (30199384-30199237) | |
| 257-404, gnl|monDom2|scaffold_51 (3404520-3404651) | |
| 257-404, gnl|oryCun1|scaffold_175208 (46309-46180) | |
| 257-404, gnl|panTro1|chr11 (113523562-113523694) | |
| 257-404, gnl|rheMac2|chr15 (10010214-10010084) | |
| 257-404, gnl|rn3|chr3 (9201368-9201498) | |
| 257-404, gnl|tetNig1|chr1_random (330732-330858) | |
| 257-404, gnl|xenTro1|scaffold_82 (501248-501116) | |
| 406-557, gnl|bosTau2|chr11 (78668956-78668805) | |
| 406-557, gnl|canFam2|chr9 (58136477-58136366) | |
| 406-557, gnl|danRer3|chrNA (179805433-179805322) | |
| 406-557, gnl|dasNov1|scaffold_304127 (115-4) | |
| 406-557, gnl|echTel1|scaffold_242937 (1831-1720) | |
| 406-557, gnl|fr1|chrUn (287807763-287807874) | |
| 406-557, gnl|galGal2|chr17 (5464739-5464629) | |
| 406-557, gnl|hg17|chr9 (128680047-128680158) | |
| 406-557, gnl|Hg17|chr9 (128680200-128680049) | |
| 406-557, gnl|mm7|chr2 (30195522-30195633) | |
| 406-557, gnl|Mm7|chr2 (30195675-30195524) | |
| 406-557, gnl|monDom2|scaffold_51 (3404162-3404273) | |
| 406-557, gnl|panTro1|chr11 (113519171-113519282) | |
| 406-557, gnl|rheMac2|chr15 (10014605-10014494) | |
| 406-557, gnl|rn3|chr3 (9198814-9198925) | |
| 406-557, gnl|tetNig1|chr1_random (330227-330338) | |
| 406-557, gnl|xenTro1|scaffold_82 (501462-501352) | |
| 639-773, gnl|bosTau2|chr11 (78668405-78668271) | |
| 639-773, gnl|canFam2|chr9 (58137003-58136886) | |
| 639-773, gnl|danRer3|chrNA (179805815-179805721) | |
| 639-773, gnl|dasNov1|scaffold_304127 (659-542) | |
| 639-773, gnl|echTel1|scaffold_242937 (2328-2211) | |
| 639-773, gnl|fr1|chrUn (287807411-287807513) | |
| 639-773, gnl|galGal2|chr17 (5465390-5465273) | |
| 639-773, gnl|hg17|chr9 (128679516-128679633) | |
| 639-773, gnl|Hg17|chr9 (128679650-128679516) | |
| 639-773, gnl|loxAfr1|scaffold_20210 (22741-22624) | |
| 639-773, gnl|mm7|chr2 (30194998-30195115) | |
| 639-773, gnl|Mm7|chr2 (30195132-30194998) | |
| 639-773, gnl|monDom2|scaffold_51 (3403631-3403749) | |
| 639-773, gnl|oryCun1|scaffold_131972 (31759-31643) | |
| 639-773, gnl|panTro1|chr11 (113518640-113518757) | |
| 639-773, gnl|rheMac2|chr15 (10015131-10015014) | |
| 639-773, gnl|rn3|chr3 (9198277-9198394) | |
| 639-773, gnl|tetNig1|chr1_random (329867-329960) | |
| 639-773, gnl|xenTro1|scaffold_82 (502904-502788) |
| Aligned organism(s): 65 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 9-198, gnl|bosTau2|chr11 (78678504-78678314) | |
| 9-198, gnl|canFam2|chr9 (58128495-58128292) | |
| 9-198, gnl|hg17|chr9 (128689250-128689463) | |
| 9-198, gnl|Hg17|chr9 (128689459-128689266) | |
| 9-198, gnl|mm7|chr2 (30205254-30205459) | |
| 9-198, gnl|Mm7|chr2 (30205457-30205268) | |
| 9-198, gnl|monDom2|scaffold_51 (3409931-3410139) | |
| 9-198, gnl|oryCun1|scaffold_175208 (38012-37805) | |
| 9-198, gnl|panTro1|chr11 (113528352-113528565) | |
| 9-198, gnl|rheMac2|chr15 (10004968-10004755) | |
| 9-198, gnl|rn3|chr3 (9209736-9209947) | |
| 257-404, gnl|bosTau2|chr11 (78673743-78673593) | |
| 257-404, gnl|canFam2|chr9 (58133963-58133832) | |
| 257-404, gnl|danRer3|chrNA (179800308-179800192) | |
| 257-404, gnl|dasNov1|scaffold_169141 (1116-1247) | |
| 257-404, gnl|echTel1|scaffold_194011 (4261-4130) | |
| 257-404, gnl|fr1|chrUn (287809422-287809542) | |
| 257-404, gnl|galGal2|chr17 (5463968-5463843) | |
| 257-404, gnl|hg17|chr9 (128684470-128684601) | |
| 257-404, gnl|Hg17|chr9 (128684635-128684488) | |
| 257-404, gnl|mm7|chr2 (30199220-30199350) | |
| 257-404, gnl|Mm7|chr2 (30199384-30199237) | |
| 257-404, gnl|monDom2|scaffold_51 (3404520-3404651) | |
| 257-404, gnl|oryCun1|scaffold_175208 (46309-46180) | |
| 257-404, gnl|panTro1|chr11 (113523562-113523694) | |
| 257-404, gnl|rheMac2|chr15 (10010214-10010084) | |
| 257-404, gnl|rn3|chr3 (9201368-9201498) | |
| 257-404, gnl|tetNig1|chr1_random (330732-330858) | |
| 257-404, gnl|xenTro1|scaffold_82 (501248-501116) | |
| 406-557, gnl|bosTau2|chr11 (78668956-78668805) | |
| 406-557, gnl|canFam2|chr9 (58136477-58136366) | |
| 406-557, gnl|danRer3|chrNA (179805433-179805322) | |
| 406-557, gnl|dasNov1|scaffold_304127 (115-4) | |
| 406-557, gnl|echTel1|scaffold_242937 (1831-1720) | |
| 406-557, gnl|fr1|chrUn (287807763-287807874) | |
| 406-557, gnl|galGal2|chr17 (5464739-5464629) | |
| 406-557, gnl|hg17|chr9 (128680047-128680158) | |
| 406-557, gnl|Hg17|chr9 (128680200-128680049) | |
| 406-557, gnl|mm7|chr2 (30195522-30195633) | |
| 406-557, gnl|Mm7|chr2 (30195675-30195524) | |
| 406-557, gnl|monDom2|scaffold_51 (3404162-3404273) | |
| 406-557, gnl|panTro1|chr11 (113519171-113519282) | |
| 406-557, gnl|rheMac2|chr15 (10014605-10014494) | |
| 406-557, gnl|rn3|chr3 (9198814-9198925) | |
| 406-557, gnl|tetNig1|chr1_random (330227-330338) | |
| 406-557, gnl|xenTro1|scaffold_82 (501462-501352) | |
| 639-773, gnl|bosTau2|chr11 (78668405-78668271) | |
| 639-773, gnl|canFam2|chr9 (58137003-58136886) | |
| 639-773, gnl|danRer3|chrNA (179805815-179805721) | |
| 639-773, gnl|dasNov1|scaffold_304127 (659-542) | |
| 639-773, gnl|echTel1|scaffold_242937 (2328-2211) | |
| 639-773, gnl|fr1|chrUn (287807411-287807513) | |
| 639-773, gnl|galGal2|chr17 (5465390-5465273) | |
| 639-773, gnl|hg17|chr9 (128679516-128679633) | |
| 639-773, gnl|Hg17|chr9 (128679650-128679516) | |
| 639-773, gnl|loxAfr1|scaffold_20210 (22741-22624) | |
| 639-773, gnl|mm7|chr2 (30194998-30195115) | |
| 639-773, gnl|Mm7|chr2 (30195132-30194998) | |
| 639-773, gnl|monDom2|scaffold_51 (3403631-3403749) | |
| 639-773, gnl|oryCun1|scaffold_131972 (31759-31643) | |
| 639-773, gnl|panTro1|chr11 (113518640-113518757) | |
| 639-773, gnl|rheMac2|chr15 (10015131-10015014) | |
| 639-773, gnl|rn3|chr3 (9198277-9198394) | |
| 639-773, gnl|tetNig1|chr1_random (329867-329960) | |
| 639-773, gnl|xenTro1|scaffold_82 (502904-502788) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pgl (0.118483) |