Ss1.1-Liv1-LVR010052H01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTGCGGCCGGGGAGCCCAGCGGCGCTTCCAGCCGCTCTCTTTGACTCGCCGGCCGGATC ACCCTTCTGGCCCCGCCGAGCAGGCGCGGGGGAGCGGCCCCGACTGCGGGGTCATGGCAG TAGCCTCCTCGTTCTTCGCCGCCGCTGGCCCCGCCGAGTCGCCGGCTTCTGCGCGAGGGA CGCCCACCGCCTCCGCAGGCTAAGAGCCGCTGCCGCCTCCGAGCTGGTCAAGCCAGAAGA GAAGTAAAACTCAACAAAATTTTATTATGTGTGGAAGTCGTTCTTAAAAGAAGGAAAAAA GTGATTATTGAGACTATGGATCGGAGCAAACGGAATTCAATTGCAGGATTTCCGCCACGA GTGGAGCGTCTCGAAGATTTTGAAGGAGGAGGCGGCGGAGGGGACGGGAGCCTGTCCCAC GTGGGAAGAGTTTGGCCCTCTTCATATCGAGCTCTTATAAGTGCCTTTTCCAGACTCACG CGTTTAGATGACTTCACCTGTGAAAAAATAGGCTCTGGCTTTTTCTCTGAAGTGTTCAAG GTGCGCCACCGAGCTTCTGGCCAGGTGATGGCTCTTAAGATGAACACGTTGAGCAGTAAC CGGGCAAACATGCTGAAAGAGGTGCAGCTCATGAATAGACTCTCCCACCCCAACATCCTT AGGTTCATGGGCGTGTGTGTACATCAAGGACAGTTGCATGCACTTACAGAGTATATCAAC TCCGGAAACCTGGAACAGTTGCTGGACAGTAACCTGCATTTGCCCTGGACTGTGAGGGTG AAACTGGCTTATGATATAGCAGTGGGCCTCAGCTAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTGCGGCCGGGGAGCCCAGCGGCGCTTCCAGCCGCTCTCTTTGACTCGCCGGCCGGATC ACCCTTCTGGCCCCGCCGAGCAGGCGCGGGGGAGCGGCCCCGACTGCGGGGTCATGGCAG TAGCCTCCTCGTTCTTCGCCGCCGCTGGCCCCGCCGAGTCGCCGGCTTCTGCGCGAGGGA CGCCCACCGCCTCCGCAGGCTAAGAGCCGCTGCCGCCTCCGAGCTGGTCAAGCCAGAAGA GAAGTAAAACTCAACAAAATTTTATTATGTGTGGAAGTCGTTCTTAAAAGAAGGAAAAAA GTGATTATTGAGACTATGGATCGGAGCAAACGGAATTCAATTGCAGGATTTCCGCCACGA GTGGAGCGTCTCGAAGATTTTGAAGGAGGAGGCGGCGGAGGGGACGGGAGCCTGTCCCAC GTGGGAAGAGTTTGGCCCTCTTCATATCGAGCTCTTATAAGTGCCTTTTCCAGACTCACG CGTTTAGATGACTTCACCTGTGAAAAAATAGGCTCTGGCTTTTTCTCTGAAGTGTTCAAG GTGCGCCACCGAGCTTCTGGCCAGGTGATGGCTCTTAAGATGAACACGTTGAGCAGTAAC CGGGCAAACATGCTGAAAGAGGTGCAGCTCATGAATAGACTCTCCCACCCCAACATCCTT AGGTTCATGGGCGTGTGTGTACATCAAGGACAGTTGCATGCACTTACAGAGTATATCAAC TCCGGAAACCTGGAACAGTTGCTGGACAGTAACCTGCATTTGCCCTGGACTGTGAGGGTG AAACTGGCTTATGATATAGCAGTGGGCCTCAGCTAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 1-224, gnl|bosTau2|chr3 (70305283-70305505) | |
| 1-224, gnl|Hg17|chr1 (45625926-45625703) | |
| 1-224, gnl|Mm7|chr4 (116097399-116097608) | |
| 227-543, gnl|bosTau2|chr3 (70337293-70337606) | |
| 227-543, gnl|Hg17|chr1 (45592635-45592326) | |
| 227-543, gnl|Mm7|chr4 (116118056-116118360) | |
| 710-816, gnl|bosTau2|chr3 (70430604-70430710) | |
| 710-816, gnl|canFam2|chr15 (18006874-18006702) | |
| 710-816, gnl|danRer3|chr2 (18872836-18872666) | |
| 710-816, gnl|echTel1|scaffold_311598 (35008-35179) | |
| 710-816, gnl|fr1|chrUn (150557211-150557376) | |
| 710-816, gnl|galGal2|chr8 (21317389-21317575) | |
| 710-816, gnl|hg17|chr1 (45490063-45490234) | |
| 710-816, gnl|Hg17|chr1 (45490216-45490110) | |
| 710-816, gnl|loxAfr1|scaffold_8559 (88677-88848) | |
| 710-816, gnl|mm7|chr4 (116168680-116168509) | |
| 710-816, gnl|Mm7|chr4 (116168525-116168631) | |
| 710-816, gnl|monDom2|scaffold_70 (7693402-7693216) | |
| 710-816, gnl|oryCun1|scaffold_209879 (53762-53591) | |
| 710-816, gnl|panTro1|chr1_random (65187387-65187216) | |
| 710-816, gnl|rheMac2|chr1 (48271165-48271336) | |
| 710-816, gnl|rn3|chr5 (137094845-137094674) | |
| 710-816, gnl|tetNig1|chr18 (1448357-1448513) | |
| 710-816, gnl|xenTro1|scaffold_313 (1184506-1184677) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-224, gnl|bosTau2|chr3 (70305283-70305505) | |
| 1-224, gnl|Hg17|chr1 (45625926-45625703) | |
| 1-224, gnl|Mm7|chr4 (116097399-116097608) | |
| 227-543, gnl|bosTau2|chr3 (70337293-70337606) | |
| 227-543, gnl|Hg17|chr1 (45592635-45592326) | |
| 227-543, gnl|Mm7|chr4 (116118056-116118360) | |
| 710-816, gnl|bosTau2|chr3 (70430604-70430710) | |
| 710-816, gnl|canFam2|chr15 (18006874-18006702) | |
| 710-816, gnl|danRer3|chr2 (18872836-18872666) | |
| 710-816, gnl|echTel1|scaffold_311598 (35008-35179) | |
| 710-816, gnl|fr1|chrUn (150557211-150557376) | |
| 710-816, gnl|galGal2|chr8 (21317389-21317575) | |
| 710-816, gnl|hg17|chr1 (45490063-45490234) | |
| 710-816, gnl|Hg17|chr1 (45490216-45490110) | |
| 710-816, gnl|loxAfr1|scaffold_8559 (88677-88848) | |
| 710-816, gnl|mm7|chr4 (116168680-116168509) | |
| 710-816, gnl|Mm7|chr4 (116168525-116168631) | |
| 710-816, gnl|monDom2|scaffold_70 (7693402-7693216) | |
| 710-816, gnl|oryCun1|scaffold_209879 (53762-53591) | |
| 710-816, gnl|panTro1|chr1_random (65187387-65187216) | |
| 710-816, gnl|rheMac2|chr1 (48271165-48271336) | |
| 710-816, gnl|rn3|chr5 (137094845-137094674) | |
| 710-816, gnl|tetNig1|chr18 (1448357-1448513) | |
| 710-816, gnl|xenTro1|scaffold_313 (1184506-1184677) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.58548) |