Ss1.1-Liv1-LVR010056B06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGCGGAGCGCCTTGCTGGCGCCTGGGAGCGCAGCCCTGGTCCCCGCGGTGCAGGCGGGC GGCCGCGTTCCTGGCGGCGAGCGCTGGGCGGCGGGTCCAGACTCCCGCGTCGCCCACAGG ACCTGGCGGTGCGGTGTCCCGGGCTCTGCCTCCCTGTGGCTCCGAGAAGTGGGATCGGGC GACACGGAAGCGGTGCGATGGCGACTCCCGACAGCGGGGCCCCCTGGGATGCTGACCTGT GGTCCTCCCATGACAAGATGCTGGTGCAGCCCCTGAAGGACAGTGACCTGGAGGTTTACA ACATCATCAAGAAGGAGAGCCACCGGCAGCGGGTGGGACTGGAGCTCATTGCCTCGGAGA ACTTCGCCAGCCGAGCTGTCCTGGAGGCCCTGGGCTCCTGCTTGAATAACAAGTACTCCG AGGGGTACCCAGGCCAGAGGTACTACGGCGGGACCGAGTTCATTGACGAGCTGGAGCTCC TCTGCCAGAGGCGAGCGCTGCAGGTCTACGGCCTGGACCCCCAGTGCTGGGGCGTCAACG TCCAGCCCTACTCAGGCTCCCCTGCGAACTTCGCGGTGTACACCGCCCTGGTGGAACCCC ACGGCCGCATCATGGGCCTGGACCTGCCCGATGGGGGCCACCTGACCCACGGGTTCATGA CGGAGAAGAAGAAAATCTCGGCCACGTCCATCTTTTTCGAGTCCATGCCCTACAAGGTGG ACCCGGACACGGGCTACATCAACTACGACCGGCTGGAGGAGAACGCTCGCCTCTTCCACC CGAAGCTGATCATCGCAGGGACCAGCTGCTACTCCCGGAACCTGGACTACGCCCGGCTGC GCAGGATCGCCGACGACAACGGGGCCTACCTCATGGCCGACATGGCGCACATCAGCGGGC TGGTGGCGGCCGGCGTGGTGCCCTCCCCCTTCGAGCACTGCCACGTGGTGTCCACCACCA CGCACAAGACGCTGCGGGGCTGCCGAGCCGGCATGATCTTCTACCGGAAGGGAGTGCGCA GCGTGGACCCCAAGACGGGCAGAGAGACGCGGTACAACCTGGAGTCACTCATCAACTCCG CTGTGTTCCCAGGGCTGCAGGGGGGCCCCCACAACCACGCCATTGCCGGGGTCGCGGTGG CTCTGAAGCAGGCCATGACCCCGGAGTTCAGAGTCTACCAGTGCCAGGTGGTGGCCAACT GCAGAGCCCTGGCCAAGACCTTGATGGGGCTGGGCTACAAGGTAGTCACAGGTGGCTCTG ACAACCATCTGATCCTCGTGGACCTCCGATCCAAAGGCACGGACGGCGGCAGGGCCGAGA AGGTGCTGGAAGCCTGTAACATTGCCTGCAACAAGAACACCTGCCCAGGTGACAAGAGCG CCCTGCGGCCCAGCGGGCTGCGCCTGGGGACCCCGGCACTGACGTCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGCGGAGCGCCTTGCTGGCGCCTGGGAGCGCAGCCCTGGTCCCCGCGGTGCAGGCGGGC GGCCGCGTTCCTGGCGGCGAGCGCTGGGCGGCGGGTCCAGACTCCCGCGTCGCCCACAGG ACCTGGCGGTGCGGTGTCCCGGGCTCTGCCTCCCTGTGGCTCCGAGAAGTGGGATCGGGC GACACGGAAGCGGTGCGATGGCGACTCCCGACAGCGGGGCCCCCTGGGATGCTGACCTGT GGTCCTCCCATGACAAGATGCTGGTGCAGCCCCTGAAGGACAGTGACCTGGAGGTTTACA ACATCATCAAGAAGGAGAGCCACCGGCAGCGGGTGGGACTGGAGCTCATTGCCTCGGAGA ACTTCGCCAGCCGAGCTGTCCTGGAGGCCCTGGGCTCCTGCTTGAATAACAAGTACTCCG AGGGGTACCCAGGCCAGAGGTACTACGGCGGGACCGAGTTCATTGACGAGCTGGAGCTCC TCTGCCAGAGGCGAGCGCTGCAGGTCTACGGCCTGGACCCCCAGTGCTGGGGCGTCAACG TCCAGCCCTACTCAGGCTCCCCTGCGAACTTCGCGGTGTACACCGCCCTGGTGGAACCCC ACGGCCGCATCATGGGCCTGGACCTGCCCGATGGGGGCCACCTGACCCACGGGTTCATGA CGGAGAAGAAGAAAATCTCGGCCACGTCCATCTTTTTCGAGTCCATGCCCTACAAGGTGG ACCCGGACACGGGCTACATCAACTACGACCGGCTGGAGGAGAACGCTCGCCTCTTCCACC CGAAGCTGATCATCGCAGGGACCAGCTGCTACTCCCGGAACCTGGACTACGCCCGGCTGC GCAGGATCGCCGACGACAACGGGGCCTACCTCATGGCCGACATGGCGCACATCAGCGGGC TGGTGGCGGCCGGCGTGGTGCCCTCCCCCTTCGAGCACTGCCACGTGGTGTCCACCACCA CGCACAAGACGCTGCGGGGCTGCCGAGCCGGCATGATCTTCTACCGGAAGGGAGTGCGCA GCGTGGACCCCAAGACGGGCAGAGAGACGCGGTACAACCTGGAGTCACTCATCAACTCCG CTGTGTTCCCAGGGCTGCAGGGGGGCCCCCACAACCACGCCATTGCCGGGGTCGCGGTGG CTCTGAAGCAGGCCATGACCCCGGAGTTCAGAGTCTACCAGTGCCAGGTGGTGGCCAACT GCAGAGCCCTGGCCAAGACCTTGATGGGGCTGGGCTACAAGGTAGTCACAGGTGGCTCTG ACAACCATCTGATCCTCGTGGACCTCCGATCCAAAGGCACGGACGGCGGCAGGGCCGAGA AGGTGCTGGAAGCCTGTAACATTGCCTGCAACAAGAACACCTGCCCAGGTGACAAGAGCG CCCTGCGGCCCAGCGGGCTGCGCCTGGGGACCCCGGCACTGACGTCCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 44 entry(ies) | More info |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
| 292-442, gnl|bosTau2|chr19 (26670642-26670492) | |
| 292-442, gnl|Hg17|chr17 (18197858-18197708) | |
| 292-442, gnl|Mm7|chr11 (60885968-60885818) | |
| 553-718, gnl|bosTau2|chr19 (26668564-26668399) | |
| 553-718, gnl|Hg17|chr17 (18191698-18191533) | |
| 553-718, gnl|Mm7|chr11 (60883149-60882984) | |
| 791-1017, gnl|bosTau2|chr19 (26667541-26667315) | |
| 791-1017, gnl|Hg17|chr17 (18184302-18184076) | |
| 791-1017, gnl|Mm7|chr11 (60879303-60879077) | |
| 1249-1372, gnl|bosTau2|chr19 (26664408-26664285) | |
| 1249-1372, gnl|canFam2|chr5 (44247022-44246906) | |
| 1249-1372, gnl|canFam2|chr5 (44247034-44246884) | |
| 1249-1372, gnl|danRer3|chr16 (15468207-15468325) | |
| 1249-1372, gnl|danRer3|chr16 (15468204-15468334) | |
| 1249-1372, gnl|dasNov1|scaffold_29689 (10504-10386) | |
| 1249-1372, gnl|dasNov1|scaffold_29689 (10511-10365) | |
| 1249-1372, gnl|echTel1|scaffold_287489 (50118-50236) | |
| 1249-1372, gnl|echTel1|scaffold_287489 (50108-50257) | |
| 1249-1372, gnl|fr1|chrUn (273860028-273860146) | |
| 1249-1372, gnl|fr1|chrUn (208158036-208158188) | |
| 1249-1372, gnl|galGal2|chr14 (7158440-7158552) | |
| 1249-1372, gnl|galGal2|chr14 (7158424-7158566) | |
| 1249-1372, gnl|hg17|chr1 (43985338-43985459) | |
| 1249-1372, gnl|hg17|chr17 (18174581-18174730) | |
| 1249-1372, gnl|Hg17|chr17 (18174713-18174590) | |
| 1249-1372, gnl|loxAfr1|scaffold_14005 (44103-43985) | |
| 1249-1372, gnl|loxAfr1|scaffold_14005 (44110-43964) | |
| 1249-1372, gnl|mm7|chr11 (60871701-60871819) | |
| 1249-1372, gnl|mm7|chr11 (60871691-60871841) | |
| 1249-1372, gnl|Mm7|chr11 (60871823-60871700) | |
| 1249-1372, gnl|monDom2|scaffold_55 (12043649-12043517) | |
| 1249-1372, gnl|monDom2|scaffold_55 (12040405-12040258) | |
| 1249-1372, gnl|oryCun1|scaffold_200231 (30521-30403) | |
| 1249-1372, gnl|oryCun1|scaffold_200231 (30521-30377) | |
| 1249-1372, gnl|panTro1|chr1 (44974796-44974917) | |
| 1249-1372, gnl|panTro1|chr19 (18580809-18580958) | |
| 1249-1372, gnl|rheMac2|chr1 (46772503-46772624) | |
| 1249-1372, gnl|rheMac2|chr16 (18252823-18252972) | |
| 1249-1372, gnl|rn3|chr10 (46951676-46951794) | |
| 1249-1372, gnl|rn3|chr10 (46951666-46951808) | |
| 1249-1372, gnl|tetNig1|chrUn_random (38812346-38812228) | |
| 1249-1372, gnl|tetNig1|chrUn_random (38812357-38812208) | |
| 1249-1372, gnl|xenTro1|scaffold_142 (1054118-1053956) | |
| 1249-1372, gnl|xenTro1|scaffold_142 (1054119-1053991) |
| Aligned organism(s): 44 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 292-442, gnl|bosTau2|chr19 (26670642-26670492) | |
| 292-442, gnl|Hg17|chr17 (18197858-18197708) | |
| 292-442, gnl|Mm7|chr11 (60885968-60885818) | |
| 553-718, gnl|bosTau2|chr19 (26668564-26668399) | |
| 553-718, gnl|Hg17|chr17 (18191698-18191533) | |
| 553-718, gnl|Mm7|chr11 (60883149-60882984) | |
| 791-1017, gnl|bosTau2|chr19 (26667541-26667315) | |
| 791-1017, gnl|Hg17|chr17 (18184302-18184076) | |
| 791-1017, gnl|Mm7|chr11 (60879303-60879077) | |
| 1249-1372, gnl|bosTau2|chr19 (26664408-26664285) | |
| 1249-1372, gnl|canFam2|chr5 (44247022-44246906) | |
| 1249-1372, gnl|canFam2|chr5 (44247034-44246884) | |
| 1249-1372, gnl|danRer3|chr16 (15468207-15468325) | |
| 1249-1372, gnl|danRer3|chr16 (15468204-15468334) | |
| 1249-1372, gnl|dasNov1|scaffold_29689 (10504-10386) | |
| 1249-1372, gnl|dasNov1|scaffold_29689 (10511-10365) | |
| 1249-1372, gnl|echTel1|scaffold_287489 (50118-50236) | |
| 1249-1372, gnl|echTel1|scaffold_287489 (50108-50257) | |
| 1249-1372, gnl|fr1|chrUn (273860028-273860146) | |
| 1249-1372, gnl|fr1|chrUn (208158036-208158188) | |
| 1249-1372, gnl|galGal2|chr14 (7158440-7158552) | |
| 1249-1372, gnl|galGal2|chr14 (7158424-7158566) | |
| 1249-1372, gnl|hg17|chr1 (43985338-43985459) | |
| 1249-1372, gnl|hg17|chr17 (18174581-18174730) | |
| 1249-1372, gnl|Hg17|chr17 (18174713-18174590) | |
| 1249-1372, gnl|loxAfr1|scaffold_14005 (44103-43985) | |
| 1249-1372, gnl|loxAfr1|scaffold_14005 (44110-43964) | |
| 1249-1372, gnl|mm7|chr11 (60871701-60871819) | |
| 1249-1372, gnl|mm7|chr11 (60871691-60871841) | |
| 1249-1372, gnl|Mm7|chr11 (60871823-60871700) | |
| 1249-1372, gnl|monDom2|scaffold_55 (12043649-12043517) | |
| 1249-1372, gnl|monDom2|scaffold_55 (12040405-12040258) | |
| 1249-1372, gnl|oryCun1|scaffold_200231 (30521-30403) | |
| 1249-1372, gnl|oryCun1|scaffold_200231 (30521-30377) | |
| 1249-1372, gnl|panTro1|chr1 (44974796-44974917) | |
| 1249-1372, gnl|panTro1|chr19 (18580809-18580958) | |
| 1249-1372, gnl|rheMac2|chr1 (46772503-46772624) | |
| 1249-1372, gnl|rheMac2|chr16 (18252823-18252972) | |
| 1249-1372, gnl|rn3|chr10 (46951676-46951794) | |
| 1249-1372, gnl|rn3|chr10 (46951666-46951808) | |
| 1249-1372, gnl|tetNig1|chrUn_random (38812346-38812228) | |
| 1249-1372, gnl|tetNig1|chrUn_random (38812357-38812208) | |
| 1249-1372, gnl|xenTro1|scaffold_142 (1054118-1053956) | |
| 1249-1372, gnl|xenTro1|scaffold_142 (1054119-1053991) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) |