Ss1.1-Liv1-LVR010060H05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGTGGCTGCGGAGCCAGGCGCCTCGCAGGATGGTGGACAGCGTGTACCGGACCCGCTCC CTGGGGGTGGCGGCTGAAGGGCTCCCGGACCAGTACGCGGACGGAGAGGCGGCGCGCGTG TGGCAGCTGTACATCGGAGACACCCGCAGCCGCACGGCTGAGTACAAGGCTTGGCTGCTC GGGCTGCTGCGACAGCACGGCTGCCAGCGAGTCCTCGACGTGGCCTGTGGTACCGGGGTG GACTCCATCATGCTAGTGGAAGAAGGCTTCAGTGTGACAAGTGTGGATGCCAGTGACAAG ATGCTCAAGTATGCACTTAAAGAGCGCTGGAACCGGCGGCATGAGCCTGCTTTCGACAAG TGGGTCATTGAAGAAGCCAACTGGATGACTCTAGACAAAGATGTGCCCAAGTCACCAATG GGTGGCTTCGATGCTGTCATCTGCCTTGGAAACAGTTTTGCCCACTTGCCAGACTGCAGA GGGGACCAGAGTGAGCACCGGCTGGCCCTGAAAAACATCACAAGCATGGTGCGGTCAGGG GGCTTGCTGGTCATTGATCATCGAAACTACGACCACATCCTCAGCACAGGCTGTGCACCC CCAGGAAAGAACATCTACTATAAGAGTGACCTGATCAAGGACATCACGACATCTGTGCTG ACAGTGAACAACAAGGCTCACATGGTGACCCTCGATTACACGGTGCAGGTGCCGGGGACT GGCCACAGAGGTTCTCCTGGCTTGAGTAAGTTCCGGCTCTCCTACTACCCTCACTGTCTG GCATCCTTTACGGAGCTGCTACAAACAGCCTTCGGGGGCAAGTGCCAGCACAGTGTCCTA GGAGATTTCAAGCCTTACAAGCCGGGCCAGGCCTACATTCCCTGCTATTTCATCCACGTG CTCAGGAAGACGGACTGAGTGAGGCCTCAGCTCCCACTGCCCTCTGCCCAGGCGCTGCCA GGCTCCGTCTGTGGAGGAGGGGACCAGAAGCCCCACACGGAGCCCAACCCCCAATGCAGA TCCGGGGGTGTGGGAAGGGGTGGGCTGCAGCTGGGGGCAGGGATTCGGGTTCAAACAGAT GGAAAGGAAAACAATATAGTCTATGCTTTTTTCAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGTGGCTGCGGAGCCAGGCGCCTCGCAGGATGGTGGACAGCGTGTACCGGACCCGCTCC CTGGGGGTGGCGGCTGAAGGGCTCCCGGACCAGTACGCGGACGGAGAGGCGGCGCGCGTG TGGCAGCTGTACATCGGAGACACCCGCAGCCGCACGGCTGAGTACAAGGCTTGGCTGCTC GGGCTGCTGCGACAGCACGGCTGCCAGCGAGTCCTCGACGTGGCCTGTGGTACCGGGGTG GACTCCATCATGCTAGTGGAAGAAGGCTTCAGTGTGACAAGTGTGGATGCCAGTGACAAG ATGCTCAAGTATGCACTTAAAGAGCGCTGGAACCGGCGGCATGAGCCTGCTTTCGACAAG TGGGTCATTGAAGAAGCCAACTGGATGACTCTAGACAAAGATGTGCCCAAGTCACCAATG GGTGGCTTCGATGCTGTCATCTGCCTTGGAAACAGTTTTGCCCACTTGCCAGACTGCAGA GGGGACCAGAGTGAGCACCGGCTGGCCCTGAAAAACATCACAAGCATGGTGCGGTCAGGG GGCTTGCTGGTCATTGATCATCGAAACTACGACCACATCCTCAGCACAGGCTGTGCACCC CCAGGAAAGAACATCTACTATAAGAGTGACCTGATCAAGGACATCACGACATCTGTGCTG ACAGTGAACAACAAGGCTCACATGGTGACCCTCGATTACACGGTGCAGGTGCCGGGGACT GGCCACAGAGGTTCTCCTGGCTTGAGTAAGTTCCGGCTCTCCTACTACCCTCACTGTCTG GCATCCTTTACGGAGCTGCTACAAACAGCCTTCGGGGGCAAGTGCCAGCACAGTGTCCTA GGAGATTTCAAGCCTTACAAGCCGGGCCAGGCCTACATTCCCTGCTATTTCATCCACGTG CTCAGGAAGACGGACTGAGTGAGGCCTCAGCTCCCACTGCCCTCTGCCCAGGCGCTGCCA GGCTCCGTCTGTGGAGGAGGGGACCAGAAGCCCCACACGGAGCCCAACCCCCAATGCAGA TCCGGGGGTGTGGGAAGGGGTGGGCTGCAGCTGGGGGCAGGGATTCGGGTTCAAACAGAT GGAAAGGAAAACAATATAGTCTATGCTTTTTTCAGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
| 5-237, gnl|bosTau2|chr23 (13018290-13018522) | |
| 5-237, gnl|Hg17|chr6 (43036458-43036690) | |
| 5-237, gnl|Mm7|chr17 (44858364-44858132) | |
| 480-624, gnl|bosTau2|chr23 (13020929-13021073) | |
| 480-624, gnl|canFam2|chr12 (14505884-14506033) | |
| 480-624, gnl|danRer3|chrNA (37390241-37390390) | |
| 480-624, gnl|dasNov1|scaffold_24313 (14758-14609) | |
| 480-624, gnl|echTel1|scaffold_323377 (117543-117692) | |
| 480-624, gnl|fr1|chrUn (303309308-303309159) | |
| 480-624, gnl|galGal2|chr14 (16218617-16218468) | |
| 480-624, gnl|hg17|chr6 (43038784-43038933) | |
| 480-624, gnl|Hg17|chr6 (43038786-43038930) | |
| 480-624, gnl|loxAfr1|scaffold_48555 (11140-11289) | |
| 480-624, gnl|mm7|chr17 (44855604-44855455) | |
| 480-624, gnl|Mm7|chr17 (44855600-44855456) | |
| 480-624, gnl|monDom2|scaffold_0 (198690769-198690620) | |
| 480-624, gnl|oryCun1|scaffold_198310 (16558-16409) | |
| 480-624, gnl|panTro1|chr5 (43634466-43634615) | |
| 480-624, gnl|rheMac2|chr4 (42849535-42849684) | |
| 480-624, gnl|rn3|chr9 (10127051-10127200) | |
| 480-624, gnl|tetNig1|chr10 (1862891-1862742) | |
| 480-624, gnl|xenTro1|scaffold_1981 (52379-52212) | |
| 745-1061, gnl|bosTau2|chr23 (13021386-13021698) | |
| 745-1061, gnl|canFam2|chr12 (14506339-14506539) | |
| 745-1061, gnl|danRer3|chrNA (37394585-37394773) | |
| 745-1061, gnl|dasNov1|scaffold_24313 (14309-14117) | |
| 745-1061, gnl|echTel1|scaffold_323377 (118089-118282) | |
| 745-1061, gnl|fr1|chrUn (303305179-303304984) | |
| 745-1061, gnl|galGal2|chr14 (16218167-16217975) | |
| 745-1061, gnl|hg17|chr6 (43039246-43039439) | |
| 745-1061, gnl|Hg17|chr6 (43039249-43039555) | |
| 745-1061, gnl|loxAfr1|scaffold_48555 (11700-11893) | |
| 745-1061, gnl|mm7|chr17 (44855165-44854974) | |
| 745-1061, gnl|Mm7|chr17 (44855160-44854886) | |
| 745-1061, gnl|monDom2|scaffold_0 (198688396-198688211) | |
| 745-1061, gnl|oryCun1|scaffold_198310 (16106-15913) | |
| 745-1061, gnl|panTro1|chr5 (43634916-43635109) | |
| 745-1061, gnl|rheMac2|chr4 (42849986-42850179) | |
| 745-1061, gnl|rn3|chr9 (10127488-10127675) | |
| 745-1061, gnl|tetNig1|chr10 (1862436-1862250) |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-237, gnl|bosTau2|chr23 (13018290-13018522) | |
| 5-237, gnl|Hg17|chr6 (43036458-43036690) | |
| 5-237, gnl|Mm7|chr17 (44858364-44858132) | |
| 480-624, gnl|bosTau2|chr23 (13020929-13021073) | |
| 480-624, gnl|canFam2|chr12 (14505884-14506033) | |
| 480-624, gnl|danRer3|chrNA (37390241-37390390) | |
| 480-624, gnl|dasNov1|scaffold_24313 (14758-14609) | |
| 480-624, gnl|echTel1|scaffold_323377 (117543-117692) | |
| 480-624, gnl|fr1|chrUn (303309308-303309159) | |
| 480-624, gnl|galGal2|chr14 (16218617-16218468) | |
| 480-624, gnl|hg17|chr6 (43038784-43038933) | |
| 480-624, gnl|Hg17|chr6 (43038786-43038930) | |
| 480-624, gnl|loxAfr1|scaffold_48555 (11140-11289) | |
| 480-624, gnl|mm7|chr17 (44855604-44855455) | |
| 480-624, gnl|Mm7|chr17 (44855600-44855456) | |
| 480-624, gnl|monDom2|scaffold_0 (198690769-198690620) | |
| 480-624, gnl|oryCun1|scaffold_198310 (16558-16409) | |
| 480-624, gnl|panTro1|chr5 (43634466-43634615) | |
| 480-624, gnl|rheMac2|chr4 (42849535-42849684) | |
| 480-624, gnl|rn3|chr9 (10127051-10127200) | |
| 480-624, gnl|tetNig1|chr10 (1862891-1862742) | |
| 480-624, gnl|xenTro1|scaffold_1981 (52379-52212) | |
| 745-1061, gnl|bosTau2|chr23 (13021386-13021698) | |
| 745-1061, gnl|canFam2|chr12 (14506339-14506539) | |
| 745-1061, gnl|danRer3|chrNA (37394585-37394773) | |
| 745-1061, gnl|dasNov1|scaffold_24313 (14309-14117) | |
| 745-1061, gnl|echTel1|scaffold_323377 (118089-118282) | |
| 745-1061, gnl|fr1|chrUn (303305179-303304984) | |
| 745-1061, gnl|galGal2|chr14 (16218167-16217975) | |
| 745-1061, gnl|hg17|chr6 (43039246-43039439) | |
| 745-1061, gnl|Hg17|chr6 (43039249-43039555) | |
| 745-1061, gnl|loxAfr1|scaffold_48555 (11700-11893) | |
| 745-1061, gnl|mm7|chr17 (44855165-44854974) | |
| 745-1061, gnl|Mm7|chr17 (44855160-44854886) | |
| 745-1061, gnl|monDom2|scaffold_0 (198688396-198688211) | |
| 745-1061, gnl|oryCun1|scaffold_198310 (16106-15913) | |
| 745-1061, gnl|panTro1|chr5 (43634916-43635109) | |
| 745-1061, gnl|rheMac2|chr4 (42849986-42850179) | |
| 745-1061, gnl|rn3|chr9 (10127488-10127675) | |
| 745-1061, gnl|tetNig1|chr10 (1862436-1862250) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cli (0.611247) | |
| cty (0.10408) |