Ss1.1-Liv1-LVR010061A12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCAGAGCGGCTGCTGGAGGAGTGACTTAAAGGGCCCGCGCGCCGCCGCCCCCTCGGCCC GCCATGCTGCTCCCAGTCCCACTACTGCTCGGCCTTGTCGGCCTGGCCGCCGCTGAACCC ACTATTTACTTCAAGGAGCAATTTCTGGACGGAGACGGGTGGACTGATCGCTGGATTGAA TCCAAACACAAACCGGATTTTGGCAGATTCGTTCTCAGTTCCGGCAAATTCTACGGTGAC CAGGAGAAAGATAAAGGGCTACAGACAAGCCAGGATGCCCGGTTTTACGCTCTGTCGGCC AGATTTGAGCCCTTCAGCAACAAGGGTCAGACGCTGGTAGTGCAGTTCACGGTGAAACAC GAACAGAACATCGACTGTGGGGGTGGATACGTGAAGCTGTTTCCAGATGGTTTGGACCAG ACAGACATGCATGGAGACTCCGAATACAACATCATGTTTGGCCCGGACATCTGTGGCCCT GGCACCAAGAAAGTTCATGTCATCTTCAACTACAAGGGCAAGAACGTGCTCATCAATAAG GATATCCGTTGCAAGGATGATGAATTCACACACCTGTACACACTGATTGTGCGGCCCGAT AATACTTATGAGGTGAAGATTGACAACAGTCAGGTGGAGTCAGGCTCCTTGGAGGACGAT TGGGACTTCTTGCCGCCTAAGAAGATAAAGGATCCTGATGCTGTGAAGCCTGAAGACTGG GACGAGCGAGCCAAAATTGATGACCCTACAGACTCCAAACCTGAGGACTGGGACAAGCCT GAACACATTCCTGACCCTGATGCTAAGAAGCCCGAAGACTGGGATGAAGAGATGGATGGA GAGTGGGAACCGCCAGTGATACAGAACCCAGAGTACAAGGGTGAGTGGAAGCCCAGGCAG ATTGACAACCCCGATTACAAGGGCACTTGGATCCACCCAGAAATAGACAACCCTGAGTAC TCCCCTGATAGCAACATCTATGCCTATGAAAACTTTGCTGTGCTGGGCCTGGATCTCTGG CAGGTCAAGTCTGGTACCATCTTTGACAACTTCCTCATTACCAACGATGAGGCCTACGCT GAGGAGTTTGGCAACGAGACATGGGGTGTTACAAAGGCAGCAGAAAAGCAAATGAAAGAC AAGCAGGATGAAGAGCAGAGGCTAAAGGAGGAGGAGGAGGAGAAGAAGCGCAAGGAAGAG GAGGAGGTAGACAAGGAAGACGAGGAGGACAAGGATGAGGATGAGGAGGAGGAGGATGAG AAGGAGGAAGAGGAGGAGGAAGATGCTGCCGCTGGCCAGGCCAAGGATGAGCTGTAGGGG CCACACCACTGCCTCCGGGGCTGGACTGAGGCCTGAGCGCTCCTGCCATAGAGCCGGCCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCAGAGCGGCTGCTGGAGGAGTGACTTAAAGGGCCCGCGCGCCGCCGCCCCCTCGGCCC GCCATGCTGCTCCCAGTCCCACTACTGCTCGGCCTTGTCGGCCTGGCCGCCGCTGAACCC ACTATTTACTTCAAGGAGCAATTTCTGGACGGAGACGGGTGGACTGATCGCTGGATTGAA TCCAAACACAAACCGGATTTTGGCAGATTCGTTCTCAGTTCCGGCAAATTCTACGGTGAC CAGGAGAAAGATAAAGGGCTACAGACAAGCCAGGATGCCCGGTTTTACGCTCTGTCGGCC AGATTTGAGCCCTTCAGCAACAAGGGTCAGACGCTGGTAGTGCAGTTCACGGTGAAACAC GAACAGAACATCGACTGTGGGGGTGGATACGTGAAGCTGTTTCCAGATGGTTTGGACCAG ACAGACATGCATGGAGACTCCGAATACAACATCATGTTTGGCCCGGACATCTGTGGCCCT GGCACCAAGAAAGTTCATGTCATCTTCAACTACAAGGGCAAGAACGTGCTCATCAATAAG GATATCCGTTGCAAGGATGATGAATTCACACACCTGTACACACTGATTGTGCGGCCCGAT AATACTTATGAGGTGAAGATTGACAACAGTCAGGTGGAGTCAGGCTCCTTGGAGGACGAT TGGGACTTCTTGCCGCCTAAGAAGATAAAGGATCCTGATGCTGTGAAGCCTGAAGACTGG GACGAGCGAGCCAAAATTGATGACCCTACAGACTCCAAACCTGAGGACTGGGACAAGCCT GAACACATTCCTGACCCTGATGCTAAGAAGCCCGAAGACTGGGATGAAGAGATGGATGGA GAGTGGGAACCGCCAGTGATACAGAACCCAGAGTACAAGGGTGAGTGGAAGCCCAGGCAG ATTGACAACCCCGATTACAAGGGCACTTGGATCCACCCAGAAATAGACAACCCTGAGTAC TCCCCTGATAGCAACATCTATGCCTATGAAAACTTTGCTGTGCTGGGCCTGGATCTCTGG CAGGTCAAGTCTGGTACCATCTTTGACAACTTCCTCATTACCAACGATGAGGCCTACGCT GAGGAGTTTGGCAACGAGACATGGGGTGTTACAAAGGCAGCAGAAAAGCAAATGAAAGAC AAGCAGGATGAAGAGCAGAGGCTAAAGGAGGAGGAGGAGGAGAAGAAGCGCAAGGAAGAG GAGGAGGTAGACAAGGAAGACGAGGAGGACAAGGATGAGGATGAGGAGGAGGAGGATGAG AAGGAGGAAGAGGAGGAGGAAGATGCTGCCGCTGGCCAGGCCAAGGATGAGCTGTAGGGG CCACACCACTGCCTCCGGGGCTGGACTGAGGCCTGAGCGCTCCTGCCATAGAGCCGGCCG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 1-154, gnl|bosTau2|chr7 (8627483-8627636) | |
| 1-154, gnl|Hg17|chr19 (12910431-12910584) | |
| 1-154, gnl|Mm7|chr8 (83432971-83432818) | |
| 255-461, gnl|bosTau2|chr3 (64252448-64252654) | |
| 255-461, gnl|Hg17|chr1 (51747445-51747240) | |
| 255-461, gnl|Mm7|chr4 (108615215-108615421) | |
| 545-766, gnl|bosTau2|chr3 (64257719-64257939) | |
| 545-766, gnl|Hg17|chr1 (51744245-51744025) | |
| 545-766, gnl|Mm7|chr4 (108620480-108620701) | |
| 878-1025, gnl|bosTau2|chr7 (8629571-8629718) | |
| 878-1025, gnl|canFam2|chr20 (52253278-52253127) | |
| 878-1025, gnl|danRer3|chr22 (4440199-4440350) | |
| 878-1025, gnl|dasNov1|scaffold_169687 (912-761) | |
| 878-1025, gnl|echTel1|scaffold_182520 (9370-9229) | |
| 878-1025, gnl|fr1|chrUn (201165499-201165650) | |
| 878-1025, gnl|galGal2|chr28 (3628565-3628715) | |
| 878-1025, gnl|hg17|chr19 (12912557-12912708) | |
| 878-1025, gnl|Hg17|chr19 (12912556-12912703) | |
| 878-1025, gnl|loxAfr1|scaffold_78875 (12136-11985) | |
| 878-1025, gnl|mm7|chr8 (83430321-83430170) | |
| 878-1025, gnl|Mm7|chr8 (83430320-83430173) | |
| 878-1025, gnl|monDom2|scaffold_159 (133883-134033) | |
| 878-1025, gnl|oryCun1|scaffold_135042 (3353-3504) | |
| 878-1025, gnl|panTro1|chr20 (13521811-13521962) | |
| 878-1025, gnl|rheMac2|chr19 (12612676-12612827) | |
| 878-1025, gnl|rn3|chr19 (24972264-24972415) | |
| 878-1025, gnl|tetNig1|chr1 (11029285-11029134) | |
| 878-1025, gnl|xenTro1|scaffold_468 (402624-402774) | |
| 1217-1378, gnl|bosTau2|chr17 (15562633-15562472) | |
| 1217-1378, gnl|Hg17|chr19 (12915627-12915783) | |
| 1217-1378, gnl|Mm7|chr8 (83428854-83428696) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-154, gnl|bosTau2|chr7 (8627483-8627636) | |
| 1-154, gnl|Hg17|chr19 (12910431-12910584) | |
| 1-154, gnl|Mm7|chr8 (83432971-83432818) | |
| 255-461, gnl|bosTau2|chr3 (64252448-64252654) | |
| 255-461, gnl|Hg17|chr1 (51747445-51747240) | |
| 255-461, gnl|Mm7|chr4 (108615215-108615421) | |
| 545-766, gnl|bosTau2|chr3 (64257719-64257939) | |
| 545-766, gnl|Hg17|chr1 (51744245-51744025) | |
| 545-766, gnl|Mm7|chr4 (108620480-108620701) | |
| 878-1025, gnl|bosTau2|chr7 (8629571-8629718) | |
| 878-1025, gnl|canFam2|chr20 (52253278-52253127) | |
| 878-1025, gnl|danRer3|chr22 (4440199-4440350) | |
| 878-1025, gnl|dasNov1|scaffold_169687 (912-761) | |
| 878-1025, gnl|echTel1|scaffold_182520 (9370-9229) | |
| 878-1025, gnl|fr1|chrUn (201165499-201165650) | |
| 878-1025, gnl|galGal2|chr28 (3628565-3628715) | |
| 878-1025, gnl|hg17|chr19 (12912557-12912708) | |
| 878-1025, gnl|Hg17|chr19 (12912556-12912703) | |
| 878-1025, gnl|loxAfr1|scaffold_78875 (12136-11985) | |
| 878-1025, gnl|mm7|chr8 (83430321-83430170) | |
| 878-1025, gnl|Mm7|chr8 (83430320-83430173) | |
| 878-1025, gnl|monDom2|scaffold_159 (133883-134033) | |
| 878-1025, gnl|oryCun1|scaffold_135042 (3353-3504) | |
| 878-1025, gnl|panTro1|chr20 (13521811-13521962) | |
| 878-1025, gnl|rheMac2|chr19 (12612676-12612827) | |
| 878-1025, gnl|rn3|chr19 (24972264-24972415) | |
| 878-1025, gnl|tetNig1|chr1 (11029285-11029134) | |
| 878-1025, gnl|xenTro1|scaffold_468 (402624-402774) | |
| 1217-1378, gnl|bosTau2|chr17 (15562633-15562472) | |
| 1217-1378, gnl|Hg17|chr19 (12915627-12915783) | |
| 1217-1378, gnl|Mm7|chr8 (83428854-83428696) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |