Ss1.1-Liv1-LVR010066B10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACAAAGATGGCGGGGAAGGCTTCACTGAGGGCAGACTGATTTAACGCCTGAACCCACCA CGGACAGCAAAGACAGTGGTAGCGGCGCAGCCCGGACCATGGAGGAGGGCAGCAGCGCTG GCAGCGGCGGCAGCGACGGCAGCACTAGCGGGAGTGGCGGAGCGCAGCAAAGGGAGCTGG AGCGCATGGCTGAGGTCCTTGTCACCGGGGAGCAGCTACGGCTCAGGCTGCACGAAGAAA AGGTTATTAAAGATAGGCGACATCATCTCAAAACCTACCCAAACTGTTTTGTCGCAAAAG AACTGATTGACTGGCTGATCGAACACAAAGAGGCTTCTGACCGAGAGACGGCAATTAAGC TCATGCAGAAATTAGCAGACCGGGGCATTATTCATCACGTGTGTGACGAGCATAAGGAAT TCAAGGATGTCAAACTCTTCTACCGCTTTAGAAAGGATGACGGCACCTTCCCACTGGACA ATGAAGTGAAGGCCTTCATGAGAGGACAGAGGCTGTATGAGAAGCTGATGAGCCCTGAAA ACACCCTCCTGCAGCCCAGGGAAGAGGAGGGGGTCAAGTATGAGCGCACCTTCATGGCGT CTGAATTCCTGGATTGGCTGGTTCAGGAGGGTGAGGCCACCACGAGGAAGGAGGCAGAGC AGCTTTGCCAACGGCTCATGGAGCATGGCATCATACAGCACGTTTCCAACAAGCACCCAT TTGTGGACAGCAATCTTCTCTACCAGTTCAGAATGAATTTCCGGCGGAGGCGAAGACTGA TGGAGCTGCTCAATGAGAAATCCCCCGGCTCCCAGGAAACACATGACAGCCCCTTCTGTC TGAGGAAGCAGAGCCACGACAATCGGAAATCTACCAGTTTTATGTCAGTCAGCCCCAGCA AGGAGATCAAGATCGTGTCTGCTGTGCGGAGGAGCAGCATGAGCAGCTGCGGCAGCAGTG GCTACTTCAGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACAAAGATGGCGGGGAAGGCTTCACTGAGGGCAGACTGATTTAACGCCTGAACCCACCA CGGACAGCAAAGACAGTGGTAGCGGCGCAGCCCGGACCATGGAGGAGGGCAGCAGCGCTG GCAGCGGCGGCAGCGACGGCAGCACTAGCGGGAGTGGCGGAGCGCAGCAAAGGGAGCTGG AGCGCATGGCTGAGGTCCTTGTCACCGGGGAGCAGCTACGGCTCAGGCTGCACGAAGAAA AGGTTATTAAAGATAGGCGACATCATCTCAAAACCTACCCAAACTGTTTTGTCGCAAAAG AACTGATTGACTGGCTGATCGAACACAAAGAGGCTTCTGACCGAGAGACGGCAATTAAGC TCATGCAGAAATTAGCAGACCGGGGCATTATTCATCACGTGTGTGACGAGCATAAGGAAT TCAAGGATGTCAAACTCTTCTACCGCTTTAGAAAGGATGACGGCACCTTCCCACTGGACA ATGAAGTGAAGGCCTTCATGAGAGGACAGAGGCTGTATGAGAAGCTGATGAGCCCTGAAA ACACCCTCCTGCAGCCCAGGGAAGAGGAGGGGGTCAAGTATGAGCGCACCTTCATGGCGT CTGAATTCCTGGATTGGCTGGTTCAGGAGGGTGAGGCCACCACGAGGAAGGAGGCAGAGC AGCTTTGCCAACGGCTCATGGAGCATGGCATCATACAGCACGTTTCCAACAAGCACCCAT TTGTGGACAGCAATCTTCTCTACCAGTTCAGAATGAATTTCCGGCGGAGGCGAAGACTGA TGGAGCTGCTCAATGAGAAATCCCCCGGCTCCCAGGAAACACATGACAGCCCCTTCTGTC TGAGGAAGCAGAGCCACGACAATCGGAAATCTACCAGTTTTATGTCAGTCAGCCCCAGCA AGGAGATCAAGATCGTGTCTGCTGTGCGGAGGAGCAGCATGAGCAGCTGCGGCAGCAGTG GCTACTTCAGCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 6-218, gnl|bosTau2|chr8 (41025554-41025334) | |
| 220-406, gnl|bosTau2|chr14 (49521363-49521550) | |
| 220-406, gnl|Hg17|chr8 (121009820-121010007) | |
| 220-406, gnl|Mm7|chr15 (55209460-55209647) | |
| 702-886, gnl|bosTau2|chr14 (49579393-49579577) | |
| 702-886, gnl|canFam2|chr13 (21984196-21984406) | |
| 702-886, gnl|danRer3|chr16 (7929290-7929085) | |
| 702-886, gnl|dasNov1|scaffold_176979 (3489-3699) | |
| 702-886, gnl|echTel1|scaffold_312793 (87239-87452) | |
| 702-886, gnl|fr1|chrUn (43727162-43726961) | |
| 702-886, gnl|galGal2|chr2 (147082395-147082184) | |
| 702-886, gnl|hg17|chr8 (121082930-121083141) | |
| 702-886, gnl|Hg17|chr8 (121082944-121083128) | |
| 702-886, gnl|loxAfr1|scaffold_8914 (4695-4482) | |
| 702-886, gnl|mm7|chr15 (55268838-55269048) | |
| 702-886, gnl|Mm7|chr15 (55268850-55269034) | |
| 702-886, gnl|monDom2|scaffold_3 (35727342-35727129) | |
| 702-886, gnl|oryCun1|scaffold_172459 (66315-66105) | |
| 702-886, gnl|panTro1|chr7 (123721612-123721823) | |
| 702-886, gnl|rheMac2|chr8 (122510720-122510931) | |
| 702-886, gnl|rn3|chr7 (91733856-91734066) | |
| 702-886, gnl|tetNig1|chr8 (5383545-5383344) | |
| 702-886, gnl|xenTro1|scaffold_330 (629770-629572) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-218, gnl|bosTau2|chr8 (41025554-41025334) | |
| 220-406, gnl|bosTau2|chr14 (49521363-49521550) | |
| 220-406, gnl|Hg17|chr8 (121009820-121010007) | |
| 220-406, gnl|Mm7|chr15 (55209460-55209647) | |
| 702-886, gnl|bosTau2|chr14 (49579393-49579577) | |
| 702-886, gnl|canFam2|chr13 (21984196-21984406) | |
| 702-886, gnl|danRer3|chr16 (7929290-7929085) | |
| 702-886, gnl|dasNov1|scaffold_176979 (3489-3699) | |
| 702-886, gnl|echTel1|scaffold_312793 (87239-87452) | |
| 702-886, gnl|fr1|chrUn (43727162-43726961) | |
| 702-886, gnl|galGal2|chr2 (147082395-147082184) | |
| 702-886, gnl|hg17|chr8 (121082930-121083141) | |
| 702-886, gnl|Hg17|chr8 (121082944-121083128) | |
| 702-886, gnl|loxAfr1|scaffold_8914 (4695-4482) | |
| 702-886, gnl|mm7|chr15 (55268838-55269048) | |
| 702-886, gnl|Mm7|chr15 (55268850-55269034) | |
| 702-886, gnl|monDom2|scaffold_3 (35727342-35727129) | |
| 702-886, gnl|oryCun1|scaffold_172459 (66315-66105) | |
| 702-886, gnl|panTro1|chr7 (123721612-123721823) | |
| 702-886, gnl|rheMac2|chr8 (122510720-122510931) | |
| 702-886, gnl|rn3|chr7 (91733856-91734066) | |
| 702-886, gnl|tetNig1|chr8 (5383545-5383344) | |
| 702-886, gnl|xenTro1|scaffold_330 (629770-629572) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ldo (0.0970026) |