Ss1.1-Liv1-LVR010066C12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTCAGACCGGTTCCAGGAATTGACCTGACAAATATTGACGAGGCTGCCGCGATCGTCAA ACACTATTTTCCTGTGGGTAAGAGGCGACGCGGTCCTGAAGACCCAGGGCCCCAGCCCAG GGACCTTGCTAGGATGGGGCCAGCGCGGCTGTGGCTGCTGGGAGCAGGGATCCTGGCTTC TGTCCATCAGCCCTTTCCTGCCCATGGATCTAAGAGTCTGGGGGTGCCTGAAGCCCCTGG CCGTCAGCTCTCAGGGGCCCGCCCCGCCTACCACAAAATCACACCCACCCTCACCGACTT CGCTTTGCGTTTGTATAAGCAGCTGGCCGCCGAAACCCCAGGAAACATCTTCTTCTCCCC AGTGAGCATCTCCTCCACCCTGGCCCTGCTCTCCCTGGGGGCACAGGCCGACACCCCGAC GCAGATCCTGGAGGGCCTCGGCTTCAACCTCACGGAGATCCCAGAAGCCGACATCCACCG GGGCTTTCAGAGCCTCATCCGCACCCTTGACCTGCCCAGCTCTAAACTTGAAATGAAAGT AGGCAACTCCTTGTTCCTGGACAAGCAGCTAAAGCCTCAGCAGCACTTTTTGGACAACAT CAGGGAGGTGTATGGGGCTTTGGCTTTTTCTGCCAACTTCACGGACTCTGGAACAACTAG GAGGCAGATTAATGACTACCTGAGAAAGCAAACCTACGGGCAGGTGGTGGACTGCCTGGA GGAGTTCGCCCAAGACACGCTTATGGTTCTCTTGAATTATATCTTCTTCAAAGCCAAGTG GAAGCATCCTTTCAATCCCTACCAGACCCAGAAGCAAGAGAGCTTCTTTGTGGATGAGCG GACCTCTCTCCGAGTCCCCATGATGCGCCAAAAGGAAATGCACAGATTCCTCTACGACCA TGAGGTGGCCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTCAGACCGGTTCCAGGAATTGACCTGACAAATATTGACGAGGCTGCCGCGATCGTCAA ACACTATTTTCCTGTGGGTAAGAGGCGACGCGGTCCTGAAGACCCAGGGCCCCAGCCCAG GGACCTTGCTAGGATGGGGCCAGCGCGGCTGTGGCTGCTGGGAGCAGGGATCCTGGCTTC TGTCCATCAGCCCTTTCCTGCCCATGGATCTAAGAGTCTGGGGGTGCCTGAAGCCCCTGG CCGTCAGCTCTCAGGGGCCCGCCCCGCCTACCACAAAATCACACCCACCCTCACCGACTT CGCTTTGCGTTTGTATAAGCAGCTGGCCGCCGAAACCCCAGGAAACATCTTCTTCTCCCC AGTGAGCATCTCCTCCACCCTGGCCCTGCTCTCCCTGGGGGCACAGGCCGACACCCCGAC GCAGATCCTGGAGGGCCTCGGCTTCAACCTCACGGAGATCCCAGAAGCCGACATCCACCG GGGCTTTCAGAGCCTCATCCGCACCCTTGACCTGCCCAGCTCTAAACTTGAAATGAAAGT AGGCAACTCCTTGTTCCTGGACAAGCAGCTAAAGCCTCAGCAGCACTTTTTGGACAACAT CAGGGAGGTGTATGGGGCTTTGGCTTTTTCTGCCAACTTCACGGACTCTGGAACAACTAG GAGGCAGATTAATGACTACCTGAGAAAGCAAACCTACGGGCAGGTGGTGGACTGCCTGGA GGAGTTCGCCCAAGACACGCTTATGGTTCTCTTGAATTATATCTTCTTCAAAGCCAAGTG GAAGCATCCTTTCAATCCCTACCAGACCCAGAAGCAAGAGAGCTTCTTTGTGGATGAGCG GACCTCTCTCCGAGTCCCCATGATGCGCCAAAAGGAAATGCACAGATTCCTCTACGACCA TGAGGTGGCCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 1-130, gnl|bosTau2|chr21 (39300977-39301107) | |
| 1-130, gnl|canFam2|chr8 (66492648-66492992) | |
| 1-130, gnl|dasNov1|scaffold_31361 (5072-4860) | |
| 1-130, gnl|hg17|chr14 (93988688-93988947) | |
| 1-130, gnl|Hg17|chr14 (93988948-93988821) | |
| 1-130, gnl|loxAfr1|scaffold_43197 (2010-2198) | |
| 1-130, gnl|mm7|chr12 (101483872-101484146) | |
| 1-130, gnl|Mm7|chr12 (101484147-101484017) | |
| 1-130, gnl|panTro1|chr15 (94428766-94429001) | |
| 1-130, gnl|rheMac2|chr7 (157680264-157680530) | |
| 1-130, gnl|rn3|chr6 (128049615-128049817) | |
| 131-773, gnl|bosTau2|chr21 (39304720-39305365) | |
| 131-773, gnl|canFam2|chr8 (66488954-66489438) | |
| 131-773, gnl|danRer3|chr20 (9610819-9611298) | |
| 131-773, gnl|dasNov1|scaffold_31361 (8444-7960) | |
| 131-773, gnl|echTel1|scaffold_324979 (1675-2166) | |
| 131-773, gnl|fr1|chrUn (170364590-170364111) | |
| 131-773, gnl|galGal2|chr5 (42385200-42385686) | |
| 131-773, gnl|hg17|chr14 (93984215-93984698) | |
| 131-773, gnl|Hg17|chr14 (93984867-93984222) | |
| 131-773, gnl|loxAfr1|scaffold_65975 (1841-2327) | |
| 131-773, gnl|mm7|chr12 (101479979-101480462) | |
| 131-773, gnl|Mm7|chr12 (101480637-101479986) | |
| 131-773, gnl|monDom2|scaffold_6 (71858061-71858535) | |
| 131-773, gnl|oryCun1|scaffold_198079 (6295-6778) | |
| 131-773, gnl|panTro1|chr15 (94424382-94424865) | |
| 131-773, gnl|rheMac2|chr7 (157675505-157675988) | |
| 131-773, gnl|rn3|chr6 (128045665-128046148) | |
| 131-773, gnl|tetNig1|chr14 (8833384-8833863) | |
| 131-773, gnl|xenTro1|scaffold_144 (2012342-2011859) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-130, gnl|bosTau2|chr21 (39300977-39301107) | |
| 1-130, gnl|canFam2|chr8 (66492648-66492992) | |
| 1-130, gnl|dasNov1|scaffold_31361 (5072-4860) | |
| 1-130, gnl|hg17|chr14 (93988688-93988947) | |
| 1-130, gnl|Hg17|chr14 (93988948-93988821) | |
| 1-130, gnl|loxAfr1|scaffold_43197 (2010-2198) | |
| 1-130, gnl|mm7|chr12 (101483872-101484146) | |
| 1-130, gnl|Mm7|chr12 (101484147-101484017) | |
| 1-130, gnl|panTro1|chr15 (94428766-94429001) | |
| 1-130, gnl|rheMac2|chr7 (157680264-157680530) | |
| 1-130, gnl|rn3|chr6 (128049615-128049817) | |
| 131-773, gnl|bosTau2|chr21 (39304720-39305365) | |
| 131-773, gnl|canFam2|chr8 (66488954-66489438) | |
| 131-773, gnl|danRer3|chr20 (9610819-9611298) | |
| 131-773, gnl|dasNov1|scaffold_31361 (8444-7960) | |
| 131-773, gnl|echTel1|scaffold_324979 (1675-2166) | |
| 131-773, gnl|fr1|chrUn (170364590-170364111) | |
| 131-773, gnl|galGal2|chr5 (42385200-42385686) | |
| 131-773, gnl|hg17|chr14 (93984215-93984698) | |
| 131-773, gnl|Hg17|chr14 (93984867-93984222) | |
| 131-773, gnl|loxAfr1|scaffold_65975 (1841-2327) | |
| 131-773, gnl|mm7|chr12 (101479979-101480462) | |
| 131-773, gnl|Mm7|chr12 (101480637-101479986) | |
| 131-773, gnl|monDom2|scaffold_6 (71858061-71858535) | |
| 131-773, gnl|oryCun1|scaffold_198079 (6295-6778) | |
| 131-773, gnl|panTro1|chr15 (94424382-94424865) | |
| 131-773, gnl|rheMac2|chr7 (157675505-157675988) | |
| 131-773, gnl|rn3|chr6 (128045665-128046148) | |
| 131-773, gnl|tetNig1|chr14 (8833384-8833863) | |
| 131-773, gnl|xenTro1|scaffold_144 (2012342-2011859) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cli (0.152812) |