Ss1.1-Liv1-LVR010071B02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTGGGCAGCAAGGGGACCTCTGCACTCTCAGAGGCAAAGAGCAGCACACACGGCTGAAG GGACGCTCAGAGGAGGGAACCCCAGAGGACGGTGGCCATGGACCTGATCCCAAGCTTTTC TGTGGAAACCTGGCTGCTTCTGGCTACCAGCCTGGTGCTCCTCTATCTATATGGGACCTA TTCACACGGACTTTTTAAGAAGCTGGGGATTCCCGGGCCGAAACCTCTGCCTTATTTTGG AAGTGTTCTAGAATACCGTAAGGGCATGTGGCATTTTGACAATAAATGTTTTAAAAAGTA TGGGAAAATGTGGGGGTTTTATGACGGTAGACAGCCTGTGCTGGCTATGAGAGACCCAGA AATGATCAAAGCAGTGCTTGTGAAAGAATGTTACTCGGCTTTCACAAATCGGCGGAATTT TGGTCCAGCGGGAGTTATGAAAAATGCCATCTCTGTGGCTAAGGATGAGCAATGGAAGCG AGTACGAACATTGCTGTCTCCAACCTTCACCAGTGGAAAGCTCAAAGAGATGTTCCCCAT CATTGCCCAGTATGGAGATATGCTGGTGAGGAACCTGAGGAAGGAAGCAGAGAAAGGCAA TTCCATCAACACGAAAGAAATCTTTGGGGCCTACAGCATGGACGTGATCACAAGCACAGC ATTTGGAGTGAACGTCGATTCCCTCAACAACCCACGAGACCCCTTTGTACAATATGCCAG GAAGCTCCTAAGATTTGATTTCCTCGATCCATTTATTCTCTCAATAATATTATTTCCATT CCTCAGCCCATTCTTTGAAGTATTAGACATCACTTTGTTTCCAAGAAGTTCTGTGAAATT TTTCACACAGTCTGTAAAAAGGATGAAAGAAAGTCGCCTCAAAGATCAACAAATGCGCCG AGTGGACCTTCTTCAGCTGATGATTAACTCCCAGAATTCCAAAGAAACGGATGCCCATAA AGCTCTGTCTGATCAAGAACTTGTGGCCCAAAGTATTATCTTCATTTTTGCCGGCTATGA GACCACTAGCAGTTCTCTCTCCTTCCTGGCGTATATACTGGCCACTCACCCTGACGTCCA GCAGAAGCTGCAGGAGGAGATTGATGCGACCTTCCCCAGCAAGGCCCTTCCCAGCTACGA TGCCCTGGCACAGATGGAGTACCTTGACATGGTGGTGAATGAAATTCTCAGATTATACCC AATTGCTGCTAGACTTGAGAGGGTCTGTAAGAAGGATGTGGAAATCCATGGCGTGTCCGT TCCCAAGGGGACCGTGATGATGGTACCGGTTTTCTCGATTCACAGAGACCCAGAGCTCTG GCCGGAGCCTGAGGAGTTCCGCCCTGAAAGGTTCAGTAAGAAGAACAAGGACTCCATAAA CCCTTACACTTACCTGCCCTTTGGGACTGGACCCCGCAACTGCATCGGCATGAGGTTTGC CCTCATGAACATGAAACTCGCTCTCGTCAGAGTCCTGCAGAACTTCTCCTTCAAACCTTG TAAAGAAACACAGACGCCCCTGAAACTAAGCTCTCAAGGACTTATACAACCAGAAAAACC CATTCTTCTGAAGGTTGTGCCCAGAGATGGGACCGTAAGTGGAGCCTGACTTTGCCCAAG GACTCGGGCTTGGTTCCTCAAGGAAGCTGCACCCCAGAGCATCAGAGACCTTGACTTCCT TTGTGATAAGAACTCGAAATAAAGATAAGCTTAATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTGGGCAGCAAGGGGACCTCTGCACTCTCAGAGGCAAAGAGCAGCACACACGGCTGAAG GGACGCTCAGAGGAGGGAACCCCAGAGGACGGTGGCCATGGACCTGATCCCAAGCTTTTC TGTGGAAACCTGGCTGCTTCTGGCTACCAGCCTGGTGCTCCTCTATCTATATGGGACCTA TTCACACGGACTTTTTAAGAAGCTGGGGATTCCCGGGCCGAAACCTCTGCCTTATTTTGG AAGTGTTCTAGAATACCGTAAGGGCATGTGGCATTTTGACAATAAATGTTTTAAAAAGTA TGGGAAAATGTGGGGGTTTTATGACGGTAGACAGCCTGTGCTGGCTATGAGAGACCCAGA AATGATCAAAGCAGTGCTTGTGAAAGAATGTTACTCGGCTTTCACAAATCGGCGGAATTT TGGTCCAGCGGGAGTTATGAAAAATGCCATCTCTGTGGCTAAGGATGAGCAATGGAAGCG AGTACGAACATTGCTGTCTCCAACCTTCACCAGTGGAAAGCTCAAAGAGATGTTCCCCAT CATTGCCCAGTATGGAGATATGCTGGTGAGGAACCTGAGGAAGGAAGCAGAGAAAGGCAA TTCCATCAACACGAAAGAAATCTTTGGGGCCTACAGCATGGACGTGATCACAAGCACAGC ATTTGGAGTGAACGTCGATTCCCTCAACAACCCACGAGACCCCTTTGTACAATATGCCAG GAAGCTCCTAAGATTTGATTTCCTCGATCCATTTATTCTCTCAATAATATTATTTCCATT CCTCAGCCCATTCTTTGAAGTATTAGACATCACTTTGTTTCCAAGAAGTTCTGTGAAATT TTTCACACAGTCTGTAAAAAGGATGAAAGAAAGTCGCCTCAAAGATCAACAAATGCGCCG AGTGGACCTTCTTCAGCTGATGATTAACTCCCAGAATTCCAAAGAAACGGATGCCCATAA AGCTCTGTCTGATCAAGAACTTGTGGCCCAAAGTATTATCTTCATTTTTGCCGGCTATGA GACCACTAGCAGTTCTCTCTCCTTCCTGGCGTATATACTGGCCACTCACCCTGACGTCCA GCAGAAGCTGCAGGAGGAGATTGATGCGACCTTCCCCAGCAAGGCCCTTCCCAGCTACGA TGCCCTGGCACAGATGGAGTACCTTGACATGGTGGTGAATGAAATTCTCAGATTATACCC AATTGCTGCTAGACTTGAGAGGGTCTGTAAGAAGGATGTGGAAATCCATGGCGTGTCCGT TCCCAAGGGGACCGTGATGATGGTACCGGTTTTCTCGATTCACAGAGACCCAGAGCTCTG GCCGGAGCCTGAGGAGTTCCGCCCTGAAAGGTTCAGTAAGAAGAACAAGGACTCCATAAA CCCTTACACTTACCTGCCCTTTGGGACTGGACCCCGCAACTGCATCGGCATGAGGTTTGC CCTCATGAACATGAAACTCGCTCTCGTCAGAGTCCTGCAGAACTTCTCCTTCAAACCTTG TAAAGAAACACAGACGCCCCTGAAACTAAGCTCTCAAGGACTTATACAACCAGAAAAACC CATTCTTCTGAAGGTTGTGCCCAGAGATGGGACCGTAAGTGGAGCCTGACTTTGCCCAAG GACTCGGGCTTGGTTCCTCAAGGAAGCTGCACCCCAGAGCATCAGAGACCTTGACTTCCT TTGTGATAAGAACTCGAAATAAAGATAAGCTTAATC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 75 entry(ies) | More info |
| Aligned organism(s): 75 entry(ies) | Help | Less info |
| 7-187, gnl|bosTau2|chr25 (33018302-33018483) | |
| 7-187, gnl|Hg17|chr7 (98994859-98994677) | |
| 7-187, gnl|Mm7|chr5 (136839608-136839425) | |
| 33-168, gnl|bosTau2|chr25 (34516043-34516178) | |
| 33-168, gnl|Hg17|chr7 (99062229-99062362) | |
| 33-168, gnl|Mm7|chr5 (136839571-136839444) | |
| 418-529, gnl|bosTau2|chr25 (34666328-34666439) | |
| 418-529, gnl|canFam2|chr6 (12750037-12750173) | |
| 418-529, gnl|danRer3|chr25 (23348941-23348815) | |
| 418-529, gnl|dasNov1|scaffold_36563 (1459-1594) | |
| 418-529, gnl|echTel1|scaffold_262799 (6583-6449) | |
| 418-529, gnl|fr1|chrUn (47037654-47037554) | |
| 418-529, gnl|galGal2|chr14 (6083607-6083718) | |
| 418-529, gnl|hg17|chr7 (98909223-98909357) | |
| 418-529, gnl|Hg17|chr7 (98909337-98909226) | |
| 418-529, gnl|loxAfr1|scaffold_73906 (7619-7486) | |
| 418-529, gnl|mm7|chr5 (136829838-136829974) | |
| 418-529, gnl|Mm7|chr5 (136829952-136829841) | |
| 418-529, gnl|monDom2|scaffold_17 (3715523-3715657) | |
| 418-529, gnl|panTro1|chr6 (100662056-100662190) | |
| 418-529, gnl|rheMac2|chr3 (46866034-46866170) | |
| 418-529, gnl|rn3|chr12 (17163311-17163176) | |
| 418-529, gnl|tetNig1|chr9 (5139838-5139953) | |
| 418-529, gnl|xenTro1|scaffold_73 (1906748-1906874) | |
| 620-766, gnl|bosTau2|chr25 (34669868-34670014) | |
| 620-766, gnl|canFam2|chr6 (12747975-12748098) | |
| 620-766, gnl|danRer3|chr25 (23352589-23352466) | |
| 620-766, gnl|dasNov1|scaffold_48899 (9073-9174) | |
| 620-766, gnl|echTel1|scaffold_262799 (8459-8336) | |
| 620-766, gnl|fr1|chrUn (52476532-52476652) | |
| 620-766, gnl|galGal2|chr14 (6082392-6082515) | |
| 620-766, gnl|hg17|chr7 (98907433-98907556) | |
| 620-766, gnl|Hg17|chr7 (98907587-98907441) | |
| 620-766, gnl|loxAfr1|scaffold_21760 (20899-21022) | |
| 620-766, gnl|mm7|chr5 (136827911-136828034) | |
| 620-766, gnl|Mm7|chr5 (136828065-136827919) | |
| 620-766, gnl|monDom2|scaffold_17 (3713844-3713965) | |
| 620-766, gnl|oryCun1|scaffold_95532 (9595-9718) | |
| 620-766, gnl|panTro1|chr6 (100660266-100660389) | |
| 620-766, gnl|rheMac2|chr3 (46864244-46864367) | |
| 620-766, gnl|rn3|chr12 (17165169-17165046) | |
| 620-766, gnl|tetNig1|chr9 (5139116-5139237) | |
| 620-766, gnl|xenTro1|scaffold_73 (1873901-1874025) | |
| 1122-1355, gnl|bosTau2|chr25 (34688721-34688954) | |
| 1122-1355, gnl|canFam2|chr6 (12733331-12733593) | |
| 1122-1355, gnl|danRer3|chr25 (23354352-23354103) | |
| 1122-1355, gnl|dasNov1|scaffold_56184 (6727-6988) | |
| 1122-1355, gnl|echTel1|scaffold_51893 (2112-1849) | |
| 1122-1355, gnl|fr1|chrUn (52475503-52475745) | |
| 1122-1355, gnl|galGal2|chr14 (6080057-6080299) | |
| 1122-1355, gnl|hg17|chr7 (98894815-98895076) | |
| 1122-1355, gnl|Hg17|chr7 (98895055-98894822) | |
| 1122-1355, gnl|loxAfr1|scaffold_21760 (1376-1637) | |
| 1122-1355, gnl|mm7|chr5 (136816789-136817049) | |
| 1122-1355, gnl|Mm7|chr5 (136817028-136816795) | |
| 1122-1355, gnl|monDom2|scaffold_17 (3706539-3706791) | |
| 1122-1355, gnl|oryCun1|scaffold_142799 (13186-12926) | |
| 1122-1355, gnl|panTro1|chr6 (100647556-100647817) | |
| 1122-1355, gnl|rheMac2|chr3 (46857461-46857722) | |
| 1122-1355, gnl|rn3|chr12 (17179279-17179019) | |
| 1122-1355, gnl|tetNig1|chr9 (5138091-5138325) | |
| 1122-1355, gnl|xenTro1|scaffold_319 (1046783-1046534) | |
| 1511-1716, gnl|bosTau2|chr25 (34631444-34631648) | |
| 1511-1716, gnl|canFam2|chr6 (12784404-12784685) | |
| 1511-1716, gnl|dasNov1|scaffold_227075 (649-383) | |
| 1511-1716, gnl|echTel1|scaffold_291408 (16395-16664) | |
| 1511-1716, gnl|hg17|chr7 (98927280-98927563) | |
| 1511-1716, gnl|Hg17|chr7 (98947872-98947667) | |
| 1511-1716, gnl|loxAfr1|scaffold_112248 (3743-3461) | |
| 1511-1716, gnl|mm7|chr5 (144587629-144587911) | |
| 1511-1716, gnl|Mm7|chr5 (136812369-136812185) | |
| 1511-1716, gnl|oryCun1|scaffold_86406 (7293-7023) | |
| 1511-1716, gnl|panTro1|chr6 (100680137-100680420) | |
| 1511-1716, gnl|rheMac2|chr3 (46885109-46885393) | |
| 1511-1716, gnl|rn3|chr12 (9597028-9597298) |
| Aligned organism(s): 75 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 7-187, gnl|bosTau2|chr25 (33018302-33018483) | |
| 7-187, gnl|Hg17|chr7 (98994859-98994677) | |
| 7-187, gnl|Mm7|chr5 (136839608-136839425) | |
| 33-168, gnl|bosTau2|chr25 (34516043-34516178) | |
| 33-168, gnl|Hg17|chr7 (99062229-99062362) | |
| 33-168, gnl|Mm7|chr5 (136839571-136839444) | |
| 418-529, gnl|bosTau2|chr25 (34666328-34666439) | |
| 418-529, gnl|canFam2|chr6 (12750037-12750173) | |
| 418-529, gnl|danRer3|chr25 (23348941-23348815) | |
| 418-529, gnl|dasNov1|scaffold_36563 (1459-1594) | |
| 418-529, gnl|echTel1|scaffold_262799 (6583-6449) | |
| 418-529, gnl|fr1|chrUn (47037654-47037554) | |
| 418-529, gnl|galGal2|chr14 (6083607-6083718) | |
| 418-529, gnl|hg17|chr7 (98909223-98909357) | |
| 418-529, gnl|Hg17|chr7 (98909337-98909226) | |
| 418-529, gnl|loxAfr1|scaffold_73906 (7619-7486) | |
| 418-529, gnl|mm7|chr5 (136829838-136829974) | |
| 418-529, gnl|Mm7|chr5 (136829952-136829841) | |
| 418-529, gnl|monDom2|scaffold_17 (3715523-3715657) | |
| 418-529, gnl|panTro1|chr6 (100662056-100662190) | |
| 418-529, gnl|rheMac2|chr3 (46866034-46866170) | |
| 418-529, gnl|rn3|chr12 (17163311-17163176) | |
| 418-529, gnl|tetNig1|chr9 (5139838-5139953) | |
| 418-529, gnl|xenTro1|scaffold_73 (1906748-1906874) | |
| 620-766, gnl|bosTau2|chr25 (34669868-34670014) | |
| 620-766, gnl|canFam2|chr6 (12747975-12748098) | |
| 620-766, gnl|danRer3|chr25 (23352589-23352466) | |
| 620-766, gnl|dasNov1|scaffold_48899 (9073-9174) | |
| 620-766, gnl|echTel1|scaffold_262799 (8459-8336) | |
| 620-766, gnl|fr1|chrUn (52476532-52476652) | |
| 620-766, gnl|galGal2|chr14 (6082392-6082515) | |
| 620-766, gnl|hg17|chr7 (98907433-98907556) | |
| 620-766, gnl|Hg17|chr7 (98907587-98907441) | |
| 620-766, gnl|loxAfr1|scaffold_21760 (20899-21022) | |
| 620-766, gnl|mm7|chr5 (136827911-136828034) | |
| 620-766, gnl|Mm7|chr5 (136828065-136827919) | |
| 620-766, gnl|monDom2|scaffold_17 (3713844-3713965) | |
| 620-766, gnl|oryCun1|scaffold_95532 (9595-9718) | |
| 620-766, gnl|panTro1|chr6 (100660266-100660389) | |
| 620-766, gnl|rheMac2|chr3 (46864244-46864367) | |
| 620-766, gnl|rn3|chr12 (17165169-17165046) | |
| 620-766, gnl|tetNig1|chr9 (5139116-5139237) | |
| 620-766, gnl|xenTro1|scaffold_73 (1873901-1874025) | |
| 1122-1355, gnl|bosTau2|chr25 (34688721-34688954) | |
| 1122-1355, gnl|canFam2|chr6 (12733331-12733593) | |
| 1122-1355, gnl|danRer3|chr25 (23354352-23354103) | |
| 1122-1355, gnl|dasNov1|scaffold_56184 (6727-6988) | |
| 1122-1355, gnl|echTel1|scaffold_51893 (2112-1849) | |
| 1122-1355, gnl|fr1|chrUn (52475503-52475745) | |
| 1122-1355, gnl|galGal2|chr14 (6080057-6080299) | |
| 1122-1355, gnl|hg17|chr7 (98894815-98895076) | |
| 1122-1355, gnl|Hg17|chr7 (98895055-98894822) | |
| 1122-1355, gnl|loxAfr1|scaffold_21760 (1376-1637) | |
| 1122-1355, gnl|mm7|chr5 (136816789-136817049) | |
| 1122-1355, gnl|Mm7|chr5 (136817028-136816795) | |
| 1122-1355, gnl|monDom2|scaffold_17 (3706539-3706791) | |
| 1122-1355, gnl|oryCun1|scaffold_142799 (13186-12926) | |
| 1122-1355, gnl|panTro1|chr6 (100647556-100647817) | |
| 1122-1355, gnl|rheMac2|chr3 (46857461-46857722) | |
| 1122-1355, gnl|rn3|chr12 (17179279-17179019) | |
| 1122-1355, gnl|tetNig1|chr9 (5138091-5138325) | |
| 1122-1355, gnl|xenTro1|scaffold_319 (1046783-1046534) | |
| 1511-1716, gnl|bosTau2|chr25 (34631444-34631648) | |
| 1511-1716, gnl|canFam2|chr6 (12784404-12784685) | |
| 1511-1716, gnl|dasNov1|scaffold_227075 (649-383) | |
| 1511-1716, gnl|echTel1|scaffold_291408 (16395-16664) | |
| 1511-1716, gnl|hg17|chr7 (98927280-98927563) | |
| 1511-1716, gnl|Hg17|chr7 (98947872-98947667) | |
| 1511-1716, gnl|loxAfr1|scaffold_112248 (3743-3461) | |
| 1511-1716, gnl|mm7|chr5 (144587629-144587911) | |
| 1511-1716, gnl|Mm7|chr5 (136812369-136812185) | |
| 1511-1716, gnl|oryCun1|scaffold_86406 (7293-7023) | |
| 1511-1716, gnl|panTro1|chr6 (100680137-100680420) | |
| 1511-1716, gnl|rheMac2|chr3 (46885109-46885393) | |
| 1511-1716, gnl|rn3|chr12 (9597028-9597298) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| lun (3.46125) | |
| cli (2.44499) | |
| liv (0.146284) | |
| nmm (0.132802) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lun (3.46125) | |
| cli (2.44499) | |
| liv (0.146284) | |
| nmm (0.132802) |