Non-Coding RNA Search

Ss1.1-Liv1-LVR010076A02.5

Sequence:


               
               TAATCTTGCGGATGGGAACTGCCACCTCCTCAGTTGTCCTTGGCCACAGGGAGCATCTAG
GGTCTCCACAAAGACTGGCCTTGATACCACTGGGGCGTGGCACGCGTGGGGCATGGCCTG
CCTCAAAGCTGGAAACCTCACCGCTGCACGGGAGAAGTTCAGTCGCTGTCTGAAGCCCCC
TTTCGACCTCAATCAGCTGAGTCATGGCTCCAGACTGGTACAGGATGTGGTTGAGTATCT
GGAGTCCACGGCGAGGCCACTCCTGTCCGTGCAAGATGACGATTACCTGGCCACCTTGAA
AGAGCTGGAAGCTACACTTCGGACCCAGAGCCTCTCTCTGGAGGTGATTCCCGAAGGGAA
GATCATGAACAACACCTACTACCAAGAATGCCTCTTCTACCTGCATAACTACAGCACCAA
CCTGGCCATCATCAGCTTCTACGTGCGGCACAGCTGCCTCCGGGAGGCCCTGCTGCACCT
CCTCCATAAGGAGAGTCCCCCAGAAGTCTTCATAGAAGGCATTTTCCAGCCAAGCTACAA
AAGTGGGAAGCTACACGTGTTAGAAAACTTGCTGGAATCCATCGATCCAACCTTAGAAAG
CTGGGGGAAGTACTTGATTGCGGCCTGCCAGCATTTACAGAAGAAGAGCTACTACCATGT
TCTGTATGAGCTGCAGCAGTTTATGAAGGACCAAGTCCGAGCCGCCATGACCTGTATCCG
GTTCTTCACCCACAAAGCGAAGACATACACAGAGCTGGGAGAGAAGCTCTCGTGGCTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAATCTTGCGGATGGGAACTGCCACCTCCTCAGTTGTCCTTGGCCACAGGGAGCATCTAG
GGTCTCCACAAAGACTGGCCTTGATACCACTGGGGCGTGGCACGCGTGGGGCATGGCCTG
CCTCAAAGCTGGAAACCTCACCGCTGCACGGGAGAAGTTCAGTCGCTGTCTGAAGCCCCC
TTTCGACCTCAATCAGCTGAGTCATGGCTCCAGACTGGTACAGGATGTGGTTGAGTATCT
GGAGTCCACGGCGAGGCCACTCCTGTCCGTGCAAGATGACGATTACCTGGCCACCTTGAA
AGAGCTGGAAGCTACACTTCGGACCCAGAGCCTCTCTCTGGAGGTGATTCCCGAAGGGAA
GATCATGAACAACACCTACTACCAAGAATGCCTCTTCTACCTGCATAACTACAGCACCAA
CCTGGCCATCATCAGCTTCTACGTGCGGCACAGCTGCCTCCGGGAGGCCCTGCTGCACCT
CCTCCATAAGGAGAGTCCCCCAGAAGTCTTCATAGAAGGCATTTTCCAGCCAAGCTACAA
AAGTGGGAAGCTACACGTGTTAGAAAACTTGCTGGAATCCATCGATCCAACCTTAGAAAG
CTGGGGGAAGTACTTGATTGCGGCCTGCCAGCATTTACAGAAGAAGAGCTACTACCATGT
TCTGTATGAGCTGCAGCAGTTTATGAAGGACCAAGTCCGAGCCGCCATGACCTGTATCCG
GTTCTTCACCCACAAAGCGAAGACATACACAGAGCTGGGAGAGAAGCTCTCGTGGCTGCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               61-271, gnl|bosTau2|chr10 (53724546-53724336)
               

               
               61-271, gnl|Hg17|chr14 (67298883-67298673)
               

               
               61-271, gnl|Mm7|chr12 (77207129-77206919)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               61-271, gnl|bosTau2|chr10 (53724546-53724336)
               

               
               61-271, gnl|Hg17|chr14 (67298883-67298673)
               

               
               61-271, gnl|Mm7|chr12 (77207129-77206919)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lun (0.150489)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)

	61-271, gnl\|bosTau2\|chr10 (53724546-53724336)
	61-271, gnl\|Hg17\|chr14 (67298883-67298673)
	61-271, gnl\|Mm7\|chr12 (77207129-77206919)