Ss1.1-Liv1-LVR010079C05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCTCTCTGTCTCCACCGGTCCTGTCGCCGTTGCCGCCGTGGCCATGCTGGTCCCCAGGG CTGCACCCCTCTTGACGCTGCTCCTGGCCACGGGCTCCACCGGTCCTGTCGCCGTTGCCG CCGTGGCCATGCTGGTCCCCAGGGCTGCACCCCTCTTGACGCTGCTCCTGGCCACGGGCT CCTTGGGCCAGAGGGCTCAGAGACCCCCTCGACGCCCATCCCCCATCAGCACCATCCAGC CCAAGGCCAGCTTTGATGCCCAGCAGTTTGCAGGGACGTGGCTCCTGGTGGCCGTGGCTT CCTCCTGCCGCTTCCTGCAAGAGCAGGGCCACCGGGCTGAGGCCACTTCACTGCACGTGG CTCCTCAGGGTGCAGCCATGGCCGTCAGCACCTTCCGAAAGCTGGATGGGATCTGCTGGC AGGTGCGGCAGCTCTTCAGAGACACGGGGCTCCCAGGTCGCTTCCTGCTCCAGGCCCGAG GCGCCCGAGGCGCGGTGGATGTGGTCGTTGGGGAGACGGACTACCGGAGCTTTGCCATCC TGTACCTGGAGAGGGCCCGGCAGCTGTCGGTGAAGCTGTACGCCCGCTCGCTCCCCGTGA GCGAATCAGCCCTGAGTGTCTTTGAGCAGCGGGTCCAGGGGGCCAACCTGACCGAGGACC ACATCCTGTTCTTCCCCAAGTACGGCTTCTGCGACGCTGCAGACCAGTTCCACGTCCTGG ACGAAGCAAAGCAGTGAGGCCGGGGCCTTGCCGCCGAGAGAGAGCCACAAGCTGGAAGTG TGGGCACCCGCCACTCCTGGCCGAGCGGGGGCCTCTCCCATCTGCCCTGGATGCTGCCAC CCCCCCACGAGCTCGGGGCGCCACCTTCATTAAACACTGTCGGTCTCAAAAAAAAAAAAA AAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCTCTCTGTCTCCACCGGTCCTGTCGCCGTTGCCGCCGTGGCCATGCTGGTCCCCAGGG CTGCACCCCTCTTGACGCTGCTCCTGGCCACGGGCTCCACCGGTCCTGTCGCCGTTGCCG CCGTGGCCATGCTGGTCCCCAGGGCTGCACCCCTCTTGACGCTGCTCCTGGCCACGGGCT CCTTGGGCCAGAGGGCTCAGAGACCCCCTCGACGCCCATCCCCCATCAGCACCATCCAGC CCAAGGCCAGCTTTGATGCCCAGCAGTTTGCAGGGACGTGGCTCCTGGTGGCCGTGGCTT CCTCCTGCCGCTTCCTGCAAGAGCAGGGCCACCGGGCTGAGGCCACTTCACTGCACGTGG CTCCTCAGGGTGCAGCCATGGCCGTCAGCACCTTCCGAAAGCTGGATGGGATCTGCTGGC AGGTGCGGCAGCTCTTCAGAGACACGGGGCTCCCAGGTCGCTTCCTGCTCCAGGCCCGAG GCGCCCGAGGCGCGGTGGATGTGGTCGTTGGGGAGACGGACTACCGGAGCTTTGCCATCC TGTACCTGGAGAGGGCCCGGCAGCTGTCGGTGAAGCTGTACGCCCGCTCGCTCCCCGTGA GCGAATCAGCCCTGAGTGTCTTTGAGCAGCGGGTCCAGGGGGCCAACCTGACCGAGGACC ACATCCTGTTCTTCCCCAAGTACGGCTTCTGCGACGCTGCAGACCAGTTCCACGTCCTGG ACGAAGCAAAGCAGTGAGGCCGGGGCCTTGCCGCCGAGAGAGAGCCACAAGCTGGAAGTG TGGGCACCCGCCACTCCTGGCCGAGCGGGGGCCTCTCCCATCTGCCCTGGATGCTGCCAC CCCCCCACGAGCTCGGGGCGCCACCTTCATTAAACACTGTCGGTCTCAAAAAAAAAAAAA AAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 38-281, gnl|bosTau2|chr11 (86270008-86270255) | |
| 38-281, gnl|canFam2|chr9 (52007072-52006767) | |
| 38-281, gnl|dasNov1|scaffold_56168 (324-50) | |
| 38-281, gnl|hg17|chr9 (137115463-137115760) | |
| 38-281, gnl|Hg17|chr9 (137115556-137115849) | |
| 38-281, gnl|mm7|chr2 (25507703-25507397) | |
| 38-281, gnl|Mm7|chr2 (25507597-25507386) | |
| 38-281, gnl|monDom2|scaffold_1 (188398114-188397847) | |
| 38-281, gnl|panTro1|chr11 (121881870-121882190) | |
| 38-281, gnl|rheMac2|chr15 (1311519-1311199) | |
| 38-281, gnl|rn3|chr3 (3672998-3672697) | |
| 38-281, gnl|xenTro1|scaffold_4763 (4642-4344) | |
| 474-582, gnl|bosTau2|chr11 (86270685-86270793) | |
| 474-582, gnl|Hg17|chr9 (137116373-137116481) | |
| 474-582, gnl|Mm7|chr2 (25506817-25506709) | |
| 584-685, gnl|bosTau2|chr11 (86271037-86271138) | |
| 584-685, gnl|canFam2|chr9 (52005976-52005587) | |
| 584-685, gnl|echTel1|scaffold_212974 (1746-1245) | |
| 584-685, gnl|galGal2|chr17 (10330888-10331392) | |
| 584-685, gnl|hg17|chr9 (137116669-137117075) | |
| 584-685, gnl|Hg17|chr9 (137116755-137116856) | |
| 584-685, gnl|mm7|chr2 (25506513-25506118) | |
| 584-685, gnl|Mm7|chr2 (25506425-25506324) | |
| 584-685, gnl|monDom2|scaffold_190 (866937-867305) | |
| 584-685, gnl|panTro1|chr11 (121883169-121883644) | |
| 584-685, gnl|rheMac2|chr15 (1308999-1308604) | |
| 584-685, gnl|rn3|chr3 (3671818-3671443) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 38-281, gnl|bosTau2|chr11 (86270008-86270255) | |
| 38-281, gnl|canFam2|chr9 (52007072-52006767) | |
| 38-281, gnl|dasNov1|scaffold_56168 (324-50) | |
| 38-281, gnl|hg17|chr9 (137115463-137115760) | |
| 38-281, gnl|Hg17|chr9 (137115556-137115849) | |
| 38-281, gnl|mm7|chr2 (25507703-25507397) | |
| 38-281, gnl|Mm7|chr2 (25507597-25507386) | |
| 38-281, gnl|monDom2|scaffold_1 (188398114-188397847) | |
| 38-281, gnl|panTro1|chr11 (121881870-121882190) | |
| 38-281, gnl|rheMac2|chr15 (1311519-1311199) | |
| 38-281, gnl|rn3|chr3 (3672998-3672697) | |
| 38-281, gnl|xenTro1|scaffold_4763 (4642-4344) | |
| 474-582, gnl|bosTau2|chr11 (86270685-86270793) | |
| 474-582, gnl|Hg17|chr9 (137116373-137116481) | |
| 474-582, gnl|Mm7|chr2 (25506817-25506709) | |
| 584-685, gnl|bosTau2|chr11 (86271037-86271138) | |
| 584-685, gnl|canFam2|chr9 (52005976-52005587) | |
| 584-685, gnl|echTel1|scaffold_212974 (1746-1245) | |
| 584-685, gnl|galGal2|chr17 (10330888-10331392) | |
| 584-685, gnl|hg17|chr9 (137116669-137117075) | |
| 584-685, gnl|Hg17|chr9 (137116755-137116856) | |
| 584-685, gnl|mm7|chr2 (25506513-25506118) | |
| 584-685, gnl|Mm7|chr2 (25506425-25506324) | |
| 584-685, gnl|monDom2|scaffold_190 (866937-867305) | |
| 584-685, gnl|panTro1|chr11 (121883169-121883644) | |
| 584-685, gnl|rheMac2|chr15 (1308999-1308604) | |
| 584-685, gnl|rn3|chr3 (3671818-3671443) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cli (1.22249) | |
| fli (0.405762) |