Ss1.1-Liv1-LVR010099E12.5
|
GCTGAGGCTTGAGGCCACGAGAGCCTGCGTGGAAATGCCGCCGCTGCGGAGCGGGCGCTA
CTGGTTCACTGGGCTGGCTCGGGTGCGCCACGCAATGCTTTATGCAGGGCTCCGTGGGGC
CTCGAGTTTCCTGGGTTGCTCTCGGGACCCCCCTTCCGTAGCTGGCGAGCTGAGGGGTGA
GCTGGACAGATTCGGGGGCGTCTCGGTGAAACTAGACGCTCTGGACCGCCTGGACACCGT
GGAACTCATGGGATTGTTAAGGGCTGCAATACAGAAATGGAGATCGGAAGGTAGGGTAGC
GGTATGGCTGCACATTCCCATCTTCCAAAGCCGATTTATTGCCCCTGCCGCTTCCCTGGG
CTTCTGCTTTCACCACGCAGAATCAGATTCATCTACCCTGACCCTGTGGCTGGGAAAAGG
GCCCAGCAGGTTACCAGGATATGCTACACATCAAGTGGGAGTTGCAGGAGCTGTATTCGA
TGAAAATACTAAAAAAATACTGGTTGTACAAGATCGAAATAAATTGAAAAATATGTGGAA
ATTTCCAGGAGGCCTGTCGGAGCCTGGAGAAGATATTGGAGATACAGCAGTTCGAGAAGT
TTTTGAAGAGACTGGTATAAAGTCAGAATTCATGTCCCTCCTGAGTATTCGGCAACAGCA
CACCAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATTATATGCCGCTTAAAGCCACG
TTCATTCACCATAAATTTTTGCCAGCATGAATGTTTAAGGTGTGAGTGGATGGATCTCAG
TGACCTGGTCAAGAGTGAAAATACGACTCCCATCACTAGCAGGGTTGCTCGGCTGCTGCT
CTATGGGTACAAGGAAGGGTTTGACAAGATTGATCTGACCATGGAAGAACTTCCAGCAGT
TTACACAGGCTTGTCCTATAAACTCTATCACAAGGAACTGCCAGACAATTACAAAACTGT
GACAGGAATGGATTAAATTCATACTAACATGTCTAAAAAAATGTTAGTACATTGTACATG
TAGATTAATGTTTGCCATAATAAGTAGTAGACATTTGGGTTAACTGTATGTCTGATGTTA
ATTTTCTAATGCCTGTGATTTTCATGAAGAAAACTTGTTTGTAAGTGTGCACATTTTAAA
AGCCTCTCTTCAAATGTATGGAAAAGATTATAGCTCTAAGTAAGCTTTACTGGATAATGG
TAAATGCTATATAAAAAGCAGAAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCTGAGGCTTGAGGCCACGAGAGCCTGCGTGGAAATGCCGCCGCTGCGGAGCGGGCGCTA
CTGGTTCACTGGGCTGGCTCGGGTGCGCCACGCAATGCTTTATGCAGGGCTCCGTGGGGC
CTCGAGTTTCCTGGGTTGCTCTCGGGACCCCCCTTCCGTAGCTGGCGAGCTGAGGGGTGA
GCTGGACAGATTCGGGGGCGTCTCGGTGAAACTAGACGCTCTGGACCGCCTGGACACCGT
GGAACTCATGGGATTGTTAAGGGCTGCAATACAGAAATGGAGATCGGAAGGTAGGGTAGC
GGTATGGCTGCACATTCCCATCTTCCAAAGCCGATTTATTGCCCCTGCCGCTTCCCTGGG
CTTCTGCTTTCACCACGCAGAATCAGATTCATCTACCCTGACCCTGTGGCTGGGAAAAGG
GCCCAGCAGGTTACCAGGATATGCTACACATCAAGTGGGAGTTGCAGGAGCTGTATTCGA
TGAAAATACTAAAAAAATACTGGTTGTACAAGATCGAAATAAATTGAAAAATATGTGGAA
ATTTCCAGGAGGCCTGTCGGAGCCTGGAGAAGATATTGGAGATACAGCAGTTCGAGAAGT
TTTTGAAGAGACTGGTATAAAGTCAGAATTCATGTCCCTCCTGAGTATTCGGCAACAGCA
CACCAATCCTGGAGCTTTTGGGAAGTCAGATATGTATATTATATGCCGCTTAAAGCCACG
TTCATTCACCATAAATTTTTGCCAGCATGAATGTTTAAGGTGTGAGTGGATGGATCTCAG
TGACCTGGTCAAGAGTGAAAATACGACTCCCATCACTAGCAGGGTTGCTCGGCTGCTGCT
CTATGGGTACAAGGAAGGGTTTGACAAGATTGATCTGACCATGGAAGAACTTCCAGCAGT
TTACACAGGCTTGTCCTATAAACTCTATCACAAGGAACTGCCAGACAATTACAAAACTGT
GACAGGAATGGATTAAATTCATACTAACATGTCTAAAAAAATGTTAGTACATTGTACATG
TAGATTAATGTTTGCCATAATAAGTAGTAGACATTTGGGTTAACTGTATGTCTGATGTTA
ATTTTCTAATGCCTGTGATTTTCATGAAGAAAACTTGTTTGTAAGTGTGCACATTTTAAA
AGCCTCTCTTCAAATGTATGGAAAAGATTATAGCTCTAAGTAAGCTTTACTGGATAATGG
TAAATGCTATATAAAAAGCAGAAG
|
|
gi|61869448|ref|XP_586672.1| |
Protein identifier
|
gi|61869448|ref|XP_586672.1| |
|
7-243, gnl|bosTau2|chr17 (20058321-20058556) |
|
7-243, gnl|Hg17|chr4 (124201359-124201124) |
| |
|
263-468, gnl|bosTau2|chr17 (20063028-20063233) |
|
263-468, gnl|canFam2|chr19 (20381633-20381428) |
|
263-468, gnl|danRer3|chr16 (15660053-15660255) |
|
263-468, gnl|dasNov1|scaffold_10689 (26810-26605) |
|
263-468, gnl|fr1|chrUn (202577891-202578085) |
|
263-468, gnl|hg17|chr4 (124196254-124196459) |
|
263-468, gnl|Hg17|chr4 (124196465-124196260) |
|
263-468, gnl|loxAfr1|scaffold_18412 (40033-39828) |
|
263-468, gnl|mm7|chr3 (37227475-37227680) |
|
263-468, gnl|Mm7|chr3 (37227686-37227481) |
|
263-468, gnl|monDom2|scaffold_32 (4318066-4317861) |
|
263-468, gnl|panTro1|chr3 (141025997-141026202) |
|
263-468, gnl|rheMac2|chr5 (115283643-115283846) |
|
263-468, gnl|rn3|chr2 (123908632-123908837) |
|
263-468, gnl|xenTro1|scaffold_762 (286014-285809) |
| |
|
573-1223, gnl|bosTau2|chr17 (20116547-20117222) |
|
573-1223, gnl|Hg17|chr4 (124171991-124171348) |
|
573-1223, gnl|Mm7|chr3 (37216281-37215711) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
7-243, gnl|bosTau2|chr17 (20058321-20058556) |
|
7-243, gnl|Hg17|chr4 (124201359-124201124) |
| |
|
263-468, gnl|bosTau2|chr17 (20063028-20063233) |
|
263-468, gnl|canFam2|chr19 (20381633-20381428) |
|
263-468, gnl|danRer3|chr16 (15660053-15660255) |
|
263-468, gnl|dasNov1|scaffold_10689 (26810-26605) |
|
263-468, gnl|fr1|chrUn (202577891-202578085) |
|
263-468, gnl|hg17|chr4 (124196254-124196459) |
|
263-468, gnl|Hg17|chr4 (124196465-124196260) |
|
263-468, gnl|loxAfr1|scaffold_18412 (40033-39828) |
|
263-468, gnl|mm7|chr3 (37227475-37227680) |
|
263-468, gnl|Mm7|chr3 (37227686-37227481) |
|
263-468, gnl|monDom2|scaffold_32 (4318066-4317861) |
|
263-468, gnl|panTro1|chr3 (141025997-141026202) |
|
263-468, gnl|rheMac2|chr5 (115283643-115283846) |
|
263-468, gnl|rn3|chr2 (123908632-123908837) |
|
263-468, gnl|xenTro1|scaffold_762 (286014-285809) |
| |
|
573-1223, gnl|bosTau2|chr17 (20116547-20117222) |
|
573-1223, gnl|Hg17|chr4 (124171991-124171348) |
|
573-1223, gnl|Mm7|chr3 (37216281-37215711) |
|
csp (0.161186) |
|
tbr (0.154178) |
|
liv (0.146284) |
|
nmm (0.132802) |
|
bla (0.124347) |
|
ecc (0.115035) |
|
csp (0.161186) |
|
tbr (0.154178) |
|
liv (0.146284) |
|
nmm (0.132802) |
|
bla (0.124347) |
|
ecc (0.115035) |
