Ss1.1-Liv1-LVR010101G05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCTCTTGAGGACCACCTGTTCACAATGGCTTTTGAGGAGCTCCTGAATGAAGTCGGTGG CTTGGGGAAATTCCAGATGCTTCAGATGCTTTTAGCCTTTCCCCCCCTCATGATGGTAGT CTGTCATATTCTGTTGGAGAATTTTACAGCGGCCATTCCTGGTCATCACTGCTGGGTCCG CATCCTCGACAATGACACTGACTCTGGTAATGACATGGGGACCCTCGGCCCCGAGGTTCT CCTGAGAATCTCCATCCCCCTGGACTCAAACTTGAAGCCAGAGAAATGTCGGCGCTACCT CCACCCCCAGTGGCAGCTCCTTCACCTGAATGGAACCTTCCCCAACGTGACTGATCTGGA CACGGAGCCCTGTGTGGACGGCTGGGTGTATGACCAAAGCTCCTTCTCCCACACCATCGT GACTGAGTGGGACCTCGTGTGTGATTATCAGTCTCAGAAACCACTGGTTCAATTTGCATT CATGGCTGGAATGCTGCTGGGAGGCTTCCTATACGGCTATCTCTCCGACAGGTTTGGACG AAAGTTGATTCTCAGGTGGTGTTTGCTCCAGCTCGCCATCTCTGGGACCTGTGCAGCCTT TGCCCCTAACTTCCTCGTTTACTGCTTTCTACGCTTCTGGTCAGGTTGTTCTGCTGTGGC CATTCTATCAAATAACAGTATGATCGTTGTAGAGTGGACAAGGGCCCAGTCAAAGGCCAT GGTAATATCAGTGATTACTTGTGCCACTGGTATTGGACAGATAATCCTGGGAGGACTGGC TTTTGTCTTTCGAGAGTGGCGCACCCTGCAGCTGGTGGTGTCTGTACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCTCTTGAGGACCACCTGTTCACAATGGCTTTTGAGGAGCTCCTGAATGAAGTCGGTGG CTTGGGGAAATTCCAGATGCTTCAGATGCTTTTAGCCTTTCCCCCCCTCATGATGGTAGT CTGTCATATTCTGTTGGAGAATTTTACAGCGGCCATTCCTGGTCATCACTGCTGGGTCCG CATCCTCGACAATGACACTGACTCTGGTAATGACATGGGGACCCTCGGCCCCGAGGTTCT CCTGAGAATCTCCATCCCCCTGGACTCAAACTTGAAGCCAGAGAAATGTCGGCGCTACCT CCACCCCCAGTGGCAGCTCCTTCACCTGAATGGAACCTTCCCCAACGTGACTGATCTGGA CACGGAGCCCTGTGTGGACGGCTGGGTGTATGACCAAAGCTCCTTCTCCCACACCATCGT GACTGAGTGGGACCTCGTGTGTGATTATCAGTCTCAGAAACCACTGGTTCAATTTGCATT CATGGCTGGAATGCTGCTGGGAGGCTTCCTATACGGCTATCTCTCCGACAGGTTTGGACG AAAGTTGATTCTCAGGTGGTGTTTGCTCCAGCTCGCCATCTCTGGGACCTGTGCAGCCTT TGCCCCTAACTTCCTCGTTTACTGCTTTCTACGCTTCTGGTCAGGTTGTTCTGCTGTGGC CATTCTATCAAATAACAGTATGATCGTTGTAGAGTGGACAAGGGCCCAGTCAAAGGCCAT GGTAATATCAGTGATTACTTGTGCCACTGGTATTGGACAGATAATCCTGGGAGGACTGGC TTTTGTCTTTCGAGAGTGGCGCACCCTGCAGCTGGTGGTGTCTGTACC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 3-427, gnl|bosTau2|chr29 (32579588-32580012) | |
| 3-427, gnl|Hg17|chr11 (62894078-62894506) | |
| 3-427, gnl|Mm7|chr19 (8221969-8221562) | |
| 530-685, gnl|bosTau2|chr29 (32531453-32531608) | |
| 530-685, gnl|canFam2|chr18 (56636209-56636104) | |
| 530-685, gnl|echTel1|scaffold_98062 (3305-3199) | |
| 530-685, gnl|fr1|chrUn (231972231-231972345) | |
| 530-685, gnl|hg17|chr11 (62821341-62821447) | |
| 530-685, gnl|Hg17|chr11 (62821349-62821504) | |
| 530-685, gnl|loxAfr1|scaffold_28900 (23075-23181) | |
| 530-685, gnl|mm7|chr19 (7611057-7610951) | |
| 530-685, gnl|Mm7|chr19 (7641335-7641180) | |
| 530-685, gnl|monDom2|scaffold_150 (1453490-1453601) | |
| 530-685, gnl|oryCun1|scaffold_200846 (3575-3681) | |
| 530-685, gnl|panTro1|chr9 (63807572-63807678) | |
| 530-685, gnl|rheMac2|chr8 (124843638-124843741) | |
| 530-685, gnl|rn3|chr1 (211358693-211358587) | |
| 530-685, gnl|tetNig1|chr7 (10089407-10089520) | |
| 530-685, gnl|xenTro1|scaffold_251 (828982-828876) | |
| 686-828, gnl|bosTau2|chr29 (32531711-32531853) | |
| 686-828, gnl|canFam2|chr18 (56636103-56635789) | |
| 686-828, gnl|dasNov1|scaffold_20692 (9037-9351) | |
| 686-828, gnl|echTel1|scaffold_98062 (3198-2888) | |
| 686-828, gnl|fr1|chrUn (231972346-231972662) | |
| 686-828, gnl|hg17|chr11 (62821448-62821764) | |
| 686-828, gnl|Hg17|chr11 (62821606-62821748) | |
| 686-828, gnl|loxAfr1|scaffold_51336 (11690-11379) | |
| 686-828, gnl|mm7|chr19 (7610950-7610636) | |
| 686-828, gnl|Mm7|chr19 (7641080-7640938) | |
| 686-828, gnl|monDom2|scaffold_150 (1453602-1453921) | |
| 686-828, gnl|oryCun1|scaffold_200846 (3682-4002) | |
| 686-828, gnl|panTro1|chr9 (63807679-63807995) | |
| 686-828, gnl|rheMac2|chr8 (124843742-124844049) | |
| 686-828, gnl|rn3|chr1 (211358586-211358214) | |
| 686-828, gnl|tetNig1|chr7 (10089521-10089839) | |
| 686-828, gnl|xenTro1|scaffold_251 (828875-828512) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-427, gnl|bosTau2|chr29 (32579588-32580012) | |
| 3-427, gnl|Hg17|chr11 (62894078-62894506) | |
| 3-427, gnl|Mm7|chr19 (8221969-8221562) | |
| 530-685, gnl|bosTau2|chr29 (32531453-32531608) | |
| 530-685, gnl|canFam2|chr18 (56636209-56636104) | |
| 530-685, gnl|echTel1|scaffold_98062 (3305-3199) | |
| 530-685, gnl|fr1|chrUn (231972231-231972345) | |
| 530-685, gnl|hg17|chr11 (62821341-62821447) | |
| 530-685, gnl|Hg17|chr11 (62821349-62821504) | |
| 530-685, gnl|loxAfr1|scaffold_28900 (23075-23181) | |
| 530-685, gnl|mm7|chr19 (7611057-7610951) | |
| 530-685, gnl|Mm7|chr19 (7641335-7641180) | |
| 530-685, gnl|monDom2|scaffold_150 (1453490-1453601) | |
| 530-685, gnl|oryCun1|scaffold_200846 (3575-3681) | |
| 530-685, gnl|panTro1|chr9 (63807572-63807678) | |
| 530-685, gnl|rheMac2|chr8 (124843638-124843741) | |
| 530-685, gnl|rn3|chr1 (211358693-211358587) | |
| 530-685, gnl|tetNig1|chr7 (10089407-10089520) | |
| 530-685, gnl|xenTro1|scaffold_251 (828982-828876) | |
| 686-828, gnl|bosTau2|chr29 (32531711-32531853) | |
| 686-828, gnl|canFam2|chr18 (56636103-56635789) | |
| 686-828, gnl|dasNov1|scaffold_20692 (9037-9351) | |
| 686-828, gnl|echTel1|scaffold_98062 (3198-2888) | |
| 686-828, gnl|fr1|chrUn (231972346-231972662) | |
| 686-828, gnl|hg17|chr11 (62821448-62821764) | |
| 686-828, gnl|Hg17|chr11 (62821606-62821748) | |
| 686-828, gnl|loxAfr1|scaffold_51336 (11690-11379) | |
| 686-828, gnl|mm7|chr19 (7610950-7610636) | |
| 686-828, gnl|Mm7|chr19 (7641080-7640938) | |
| 686-828, gnl|monDom2|scaffold_150 (1453602-1453921) | |
| 686-828, gnl|oryCun1|scaffold_200846 (3682-4002) | |
| 686-828, gnl|panTro1|chr9 (63807679-63807995) | |
| 686-828, gnl|rheMac2|chr8 (124843742-124844049) | |
| 686-828, gnl|rn3|chr1 (211358586-211358214) | |
| 686-828, gnl|tetNig1|chr7 (10089521-10089839) | |
| 686-828, gnl|xenTro1|scaffold_251 (828875-828512) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eli (0.151814) | |
| lun (0.150489) |