Ss1.1-Liv1-LVR01A070093.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTCCAAGGTTTCCTCAGGTTCGGGTGGTGGCGCGGCCGCGGGTCCTGGGAGCCAAGGCAA CCAAGATCTTCCCCGGCTCGCGAGAGCGCCCCCTTCTCCCACGGCTTCGGGGAACCAGTG GCAGCGATGGCTCCGGTGTCTGGCTCCCGCAGCCCAGAGTGGGAGGCCTCAGGTTCCGGG GGGAAGCGTCGCAGTTCGTCGAAGAGCCCTAAGCCTTGCAGCAAATCCTCTCGCTCCCCG CGGGGCCGCCGCTCTCGCTCGCACTCTTGCTCTCGGTCCGGGGACCGGAATGGCCTTAGC CATCAGTCGAGTGGCCCCAGCCAAGGCTCCAGAAACCAGTCCTACAGATCCCGTTCTCGG TCACGCTCTCGAGAGCGGCCCTCGGCTCCGCGGGGCGCCCCTTTCGCTTCTGCCTCGTCC GCCTATTATGGCGGCTACTCACGCCCCTACGGCAGTGACAAGCCATGGCCTAGCCTCCTG GACAAGGAGAGGGAGGAGAGCCTGCGGCAGAAGAGATTAAGTGAGAGAGAGAGGATTGGA GAACTTGGAGCTCCTGAAGTATGGGGACTTTCTCCAAAGAATCCAGAACCAGACTCTGAT GAACATACACCAGTAGAGGATGAAGAGCCAAAGAAAAGCACCACTTCAGCTTCTACTTCA GAAGAAGAGAAGAAGAGGAAGAAGAAGTCTGGTCATTCAAAAGAAAGATCCAAGAAAAGG AGAAAGAAAAAATCATCTAAAAGAAAACACAAAAAGTATTCTGACGATAGTGACAGTGAC TCTGATTCTGATACAGACTCCAGTGATGAAGATACAAAAAGGAGAGCAAAGAAATCCAAG AAAAAAGAAAAGAAGAAGAAACGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTCCAAGGTTTCCTCAGGTTCGGGTGGTGGCGCGGCCGCGGGTCCTGGGAGCCAAGGCAA CCAAGATCTTCCCCGGCTCGCGAGAGCGCCCCCTTCTCCCACGGCTTCGGGGAACCAGTG GCAGCGATGGCTCCGGTGTCTGGCTCCCGCAGCCCAGAGTGGGAGGCCTCAGGTTCCGGG GGGAAGCGTCGCAGTTCGTCGAAGAGCCCTAAGCCTTGCAGCAAATCCTCTCGCTCCCCG CGGGGCCGCCGCTCTCGCTCGCACTCTTGCTCTCGGTCCGGGGACCGGAATGGCCTTAGC CATCAGTCGAGTGGCCCCAGCCAAGGCTCCAGAAACCAGTCCTACAGATCCCGTTCTCGG TCACGCTCTCGAGAGCGGCCCTCGGCTCCGCGGGGCGCCCCTTTCGCTTCTGCCTCGTCC GCCTATTATGGCGGCTACTCACGCCCCTACGGCAGTGACAAGCCATGGCCTAGCCTCCTG GACAAGGAGAGGGAGGAGAGCCTGCGGCAGAAGAGATTAAGTGAGAGAGAGAGGATTGGA GAACTTGGAGCTCCTGAAGTATGGGGACTTTCTCCAAAGAATCCAGAACCAGACTCTGAT GAACATACACCAGTAGAGGATGAAGAGCCAAAGAAAAGCACCACTTCAGCTTCTACTTCA GAAGAAGAGAAGAAGAGGAAGAAGAAGTCTGGTCATTCAAAAGAAAGATCCAAGAAAAGG AGAAAGAAAAAATCATCTAAAAGAAAACACAAAAAGTATTCTGACGATAGTGACAGTGAC TCTGATTCTGATACAGACTCCAGTGATGAAGATACAAAAAGGAGAGCAAAGAAATCCAAG AAAAAAGAAAAGAAGAAGAAACGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 268-498, gnl|bosTau2|chrX (1610392-1610158) | |
| 268-498, gnl|canFam2|chrX (95303636-95304049) | |
| 268-498, gnl|dasNov1|scaffold_10427 (49924-50400) | |
| 268-498, gnl|echTel1|scaffold_311140 (128876-129337) | |
| 268-498, gnl|hg17|chrX (119160493-119160904) | |
| 268-498, gnl|Hg17|chrX (119160699-119160501) | |
| 268-498, gnl|loxAfr1|scaffold_33603 (29778-30234) | |
| 268-498, gnl|mm7|chrX (33277967-33278324) | |
| 268-498, gnl|oryCun1|scaffold_112972 (5030-5502) | |
| 268-498, gnl|panTro1|chrX_random (9098567-9098156) | |
| 268-498, gnl|rheMac2|chrX (118458120-118458528) | |
| 268-498, gnl|rn3|chrX (7182637-7182283) | |
| 651-812, gnl|bosTau2|chrX (1591876-1591717) | |
| 651-812, gnl|canFam2|chrX (94999254-94999446) | |
| 651-812, gnl|dasNov1|scaffold_10427 (45828-46012) | |
| 651-812, gnl|echTel1|scaffold_261491 (4917-4726) | |
| 651-812, gnl|hg17|chrX (119155897-119156090) | |
| 651-812, gnl|Hg17|chrX (119156104-119155956) | |
| 651-812, gnl|loxAfr1|scaffold_33603 (25595-25788) | |
| 651-812, gnl|mm7|chrX (31896708-31896529) | |
| 651-812, gnl|Mm7|chrX (31896500-31896661) | |
| 651-812, gnl|oryCun1|scaffold_115032 (5525-5718) | |
| 651-812, gnl|panTro1|chrX_random (9103208-9103015) | |
| 651-812, gnl|rheMac2|chrX (118453416-118453609) | |
| 651-812, gnl|rn3|chrX (7777917-7778111) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 268-498, gnl|bosTau2|chrX (1610392-1610158) | |
| 268-498, gnl|canFam2|chrX (95303636-95304049) | |
| 268-498, gnl|dasNov1|scaffold_10427 (49924-50400) | |
| 268-498, gnl|echTel1|scaffold_311140 (128876-129337) | |
| 268-498, gnl|hg17|chrX (119160493-119160904) | |
| 268-498, gnl|Hg17|chrX (119160699-119160501) | |
| 268-498, gnl|loxAfr1|scaffold_33603 (29778-30234) | |
| 268-498, gnl|mm7|chrX (33277967-33278324) | |
| 268-498, gnl|oryCun1|scaffold_112972 (5030-5502) | |
| 268-498, gnl|panTro1|chrX_random (9098567-9098156) | |
| 268-498, gnl|rheMac2|chrX (118458120-118458528) | |
| 268-498, gnl|rn3|chrX (7182637-7182283) | |
| 651-812, gnl|bosTau2|chrX (1591876-1591717) | |
| 651-812, gnl|canFam2|chrX (94999254-94999446) | |
| 651-812, gnl|dasNov1|scaffold_10427 (45828-46012) | |
| 651-812, gnl|echTel1|scaffold_261491 (4917-4726) | |
| 651-812, gnl|hg17|chrX (119155897-119156090) | |
| 651-812, gnl|Hg17|chrX (119156104-119155956) | |
| 651-812, gnl|loxAfr1|scaffold_33603 (25595-25788) | |
| 651-812, gnl|mm7|chrX (31896708-31896529) | |
| 651-812, gnl|Mm7|chrX (31896500-31896661) | |
| 651-812, gnl|oryCun1|scaffold_115032 (5525-5718) | |
| 651-812, gnl|panTro1|chrX_random (9103208-9103015) | |
| 651-812, gnl|rheMac2|chrX (118453416-118453609) | |
| 651-812, gnl|rn3|chrX (7777917-7778111) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| cki (0.165235) | |
| nco (0.161734) | |
| tra (0.123092) | |
| spc (0.113366) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.165235) | |
| nco (0.161734) | |
| tra (0.123092) | |
| spc (0.113366) |