Ss1.1-Liv1-LVR01D080091.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTGCCCCCAGGAAGCCCCAGAGCGGACATCTCCCTTCCCAGCCATGGGCCCCCACCTGC TCCTGCTGCTGCTTCTGGGACTAGCAGGCCAGGGCTCGGCTGGCAGCCTCCCTGAGCTGC TGCAGGCGCCCGTAGGGAGCTCCATCCTGGTGCAGTGCCACTACCGACCTCAGGACCTCA ATGCCGGGGAGTTGTGGTGCCGGTTCCTGCAGGGGGTATGCCAGCCCGTGGTGTCATCAG TGGTGGACCGCCGGACCCCGGCTGGCAGCCGCATCTTTCTCACCGACATGGGGGGTGGCC TTGGGAGTCTGGCTGACAGCTCTTCGGACCCTGCAGGCAGTGCCAGCCCTTTGAATCCCG GCCTGGATAAGAAGAGCAGACTCTTGATTTGGGGTGCTGTGTTCCTGCTGGGCCTGCTGG TGGTGGCAGTGGTGCTGTTTACCATGATGGCAAGAAGGAAAGGGAACAGGCTTGGTGTCT GTGGACAGTTTCAGAGCAGTGGCATCTCAGGCCTGGCCTCCTCCCCGGGGGTCCACCACT CTGGCGACACTGGACCAGCTGCTGACTTGCCCTCGGACATCCCATACGTTAGGCTCGACT CGCCACCTTCCTTCGATAATACCACCTACACCAACCTGCCTCTTGATCCCCTGCCGGAGA AGCCCCCATCCCCATCTTCTTTTCCTCCTCTGCCTCCTAAGGTCATGACCTCCAAGCCTG TGACATATGCCACAGTCGTCTTCCCTGAAGGAGACAAGAGTGGAAGAGCCTCCTGTGAGC CAGTCCAAAACCCACCTAACAGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTGCCCCCAGGAAGCCCCAGAGCGGACATCTCCCTTCCCAGCCATGGGCCCCCACCTGC TCCTGCTGCTGCTTCTGGGACTAGCAGGCCAGGGCTCGGCTGGCAGCCTCCCTGAGCTGC TGCAGGCGCCCGTAGGGAGCTCCATCCTGGTGCAGTGCCACTACCGACCTCAGGACCTCA ATGCCGGGGAGTTGTGGTGCCGGTTCCTGCAGGGGGTATGCCAGCCCGTGGTGTCATCAG TGGTGGACCGCCGGACCCCGGCTGGCAGCCGCATCTTTCTCACCGACATGGGGGGTGGCC TTGGGAGTCTGGCTGACAGCTCTTCGGACCCTGCAGGCAGTGCCAGCCCTTTGAATCCCG GCCTGGATAAGAAGAGCAGACTCTTGATTTGGGGTGCTGTGTTCCTGCTGGGCCTGCTGG TGGTGGCAGTGGTGCTGTTTACCATGATGGCAAGAAGGAAAGGGAACAGGCTTGGTGTCT GTGGACAGTTTCAGAGCAGTGGCATCTCAGGCCTGGCCTCCTCCCCGGGGGTCCACCACT CTGGCGACACTGGACCAGCTGCTGACTTGCCCTCGGACATCCCATACGTTAGGCTCGACT CGCCACCTTCCTTCGATAATACCACCTACACCAACCTGCCTCTTGATCCCCTGCCGGAGA AGCCCCCATCCCCATCTTCTTTTCCTCCTCTGCCTCCTAAGGTCATGACCTCCAAGCCTG TGACATATGCCACAGTCGTCTTCCCTGAAGGAGACAAGAGTGGAAGAGCCTCCTGTGAGC CAGTCCAAAACCCACCTAACAGTC |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 86-301, gnl|bosTau2|chr23 (14254927-14255142) | |
| 86-301, gnl|canFam2|chr12 (12924135-12924672) | |
| 86-301, gnl|dasNov1|scaffold_75967 (1882-1328) | |
| 86-301, gnl|echTel1|scaffold_216891 (6243-6827) | |
| 86-301, gnl|hg17|chr6 (41229263-41229828) | |
| 86-301, gnl|Hg17|chr6 (41229808-41229593) | |
| 86-301, gnl|loxAfr1|scaffold_17852 (4346-3799) | |
| 86-301, gnl|mm7|chr17 (46505337-46504783) | |
| 86-301, gnl|Mm7|chr17 (46504801-46505016) | |
| 86-301, gnl|monDom2|scaffold_42 (2361928-2361357) | |
| 86-301, gnl|oryCun1|scaffold_198925 (5977-6540) | |
| 86-301, gnl|panTro1|chr5 (41793684-41794249) | |
| 86-301, gnl|rheMac2|chr4 (40976752-40977317) | |
| 86-301, gnl|rn3|chr9 (8051968-8052544) | |
| 515-804, gnl|bosTau2|chr23 (14258667-14258965) | |
| 515-804, gnl|canFam2|chr12 (12920273-12920736) | |
| 515-804, gnl|dasNov1|scaffold_75967 (6283-5853) | |
| 515-804, gnl|echTel1|scaffold_193589 (4386-3963) | |
| 515-804, gnl|hg17|chr6 (41225212-41225672) | |
| 515-804, gnl|Hg17|chr6 (41225635-41225337) | |
| 515-804, gnl|loxAfr1|scaffold_17852 (8444-7989) | |
| 515-804, gnl|mm7|chr17 (46511693-46511251) | |
| 515-804, gnl|Mm7|chr17 (46511287-46511564) | |
| 515-804, gnl|monDom2|scaffold_42 (2371105-2370615) | |
| 515-804, gnl|oryCun1|scaffold_198925 (2540-2968) | |
| 515-804, gnl|panTro1|chr5 (41789611-41790071) | |
| 515-804, gnl|rheMac2|chr4 (40972685-40973142) | |
| 515-804, gnl|rn3|chr9 (8018304-8018741) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 86-301, gnl|bosTau2|chr23 (14254927-14255142) | |
| 86-301, gnl|canFam2|chr12 (12924135-12924672) | |
| 86-301, gnl|dasNov1|scaffold_75967 (1882-1328) | |
| 86-301, gnl|echTel1|scaffold_216891 (6243-6827) | |
| 86-301, gnl|hg17|chr6 (41229263-41229828) | |
| 86-301, gnl|Hg17|chr6 (41229808-41229593) | |
| 86-301, gnl|loxAfr1|scaffold_17852 (4346-3799) | |
| 86-301, gnl|mm7|chr17 (46505337-46504783) | |
| 86-301, gnl|Mm7|chr17 (46504801-46505016) | |
| 86-301, gnl|monDom2|scaffold_42 (2361928-2361357) | |
| 86-301, gnl|oryCun1|scaffold_198925 (5977-6540) | |
| 86-301, gnl|panTro1|chr5 (41793684-41794249) | |
| 86-301, gnl|rheMac2|chr4 (40976752-40977317) | |
| 86-301, gnl|rn3|chr9 (8051968-8052544) | |
| 515-804, gnl|bosTau2|chr23 (14258667-14258965) | |
| 515-804, gnl|canFam2|chr12 (12920273-12920736) | |
| 515-804, gnl|dasNov1|scaffold_75967 (6283-5853) | |
| 515-804, gnl|echTel1|scaffold_193589 (4386-3963) | |
| 515-804, gnl|hg17|chr6 (41225212-41225672) | |
| 515-804, gnl|Hg17|chr6 (41225635-41225337) | |
| 515-804, gnl|loxAfr1|scaffold_17852 (8444-7989) | |
| 515-804, gnl|mm7|chr17 (46511693-46511251) | |
| 515-804, gnl|Mm7|chr17 (46511287-46511564) | |
| 515-804, gnl|monDom2|scaffold_42 (2371105-2370615) | |
| 515-804, gnl|oryCun1|scaffold_198925 (2540-2968) | |
| 515-804, gnl|panTro1|chr5 (41789611-41790071) | |
| 515-804, gnl|rheMac2|chr4 (40972685-40973142) | |
| 515-804, gnl|rn3|chr9 (8018304-8018741) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.383362) |