Ss1.1-Liv1-LVRM10016F07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTCGCGCTCGGGGGGCGGCAGTGGGACCTGCTGCGGCCGGATCTGCGCCTGGGCTCGGC GGAGCTGCGGCGGCAGAGCCAGCGTGATGGACGCTCTCTCTGAAGCAAACGGCACCTTCG CCCTCCGCCTTTTAAAGATACTGTGCCAAGATGACCCGTCACACAACGTGTTTTATTCTC CTGTGAGCATCTCCTCTGCCCTGGCCATGGTCCTCCTGGGGGCAAAAGGAGACACCGCTG CCCAGCTGGCCCAGGTGCTTTCTTTAAACACAGAGAAAGACATTCACCAGGATTTCCAGG CACTTCTTGCCGAGCTGAACAAACCCAGCACTCGGTACTTGCTCAGAACGGCCAACAAGC TCTTTGGGGAGAAGTCTCGTGAATTTCTCTCTACCTTCAAGGAATCCTGTCTTCGGTTCT ATGATGCGGAGCTGGAGCAGCTCTCCTTCGCCAGCGCCGCAGAGGCATCCAGAAAGCAGA TAAACGCTTGGGTCTCTAAAAAGACAGAAGGTAAAATTCCAGAGGTGCTGCCACGGAACT CAATTGATGAGCAGACCAGGCTGGTTCTTGTCAATGCCGTCTACTTCAAAGGAAGGTGGG ACCAGCAATTTGACAAAAAGTACACGAGAGAGATGCCTTTTAGGGTAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTCGCGCTCGGGGGGCGGCAGTGGGACCTGCTGCGGCCGGATCTGCGCCTGGGCTCGGC GGAGCTGCGGCGGCAGAGCCAGCGTGATGGACGCTCTCTCTGAAGCAAACGGCACCTTCG CCCTCCGCCTTTTAAAGATACTGTGCCAAGATGACCCGTCACACAACGTGTTTTATTCTC CTGTGAGCATCTCCTCTGCCCTGGCCATGGTCCTCCTGGGGGCAAAAGGAGACACCGCTG CCCAGCTGGCCCAGGTGCTTTCTTTAAACACAGAGAAAGACATTCACCAGGATTTCCAGG CACTTCTTGCCGAGCTGAACAAACCCAGCACTCGGTACTTGCTCAGAACGGCCAACAAGC TCTTTGGGGAGAAGTCTCGTGAATTTCTCTCTACCTTCAAGGAATCCTGTCTTCGGTTCT ATGATGCGGAGCTGGAGCAGCTCTCCTTCGCCAGCGCCGCAGAGGCATCCAGAAAGCAGA TAAACGCTTGGGTCTCTAAAAAGACAGAAGGTAAAATTCCAGAGGTGCTGCCACGGAACT CAATTGATGAGCAGACCAGGCTGGTTCTTGTCAATGCCGTCTACTTCAAAGGAAGGTGGG ACCAGCAATTTGACAAAAAGTACACGAGAGAGATGCCTTTTAGGGTAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 74-257, gnl|bosTau2|chr23 (31766118-31765935) | |
| 74-257, gnl|canFam2|chr35 (6182343-6182580) | |
| 74-257, gnl|dasNov1|scaffold_34225 (10148-10352) | |
| 74-257, gnl|echTel1|scaffold_250028 (571-773) | |
| 74-257, gnl|fr1|chrUn (267184155-267183955) | |
| 74-257, gnl|galGal2|chr2 (67465775-67465992) | |
| 74-257, gnl|hg17|chr6 (2818117-2818344) | |
| 74-257, gnl|Hg17|chr6 (2845857-2845674) | |
| 74-257, gnl|loxAfr1|scaffold_21949 (30555-30782) | |
| 74-257, gnl|mm7|chr13 (32395180-32394996) | |
| 74-257, gnl|Mm7|chr13 (32372077-32372259) | |
| 74-257, gnl|oryCun1|scaffold_187490 (15485-15274) | |
| 74-257, gnl|panTro1|chr5 (2832478-2832704) | |
| 74-257, gnl|rheMac2|chr4 (2735992-2736219) | |
| 74-257, gnl|rn3|chr17 (37750929-37751115) | |
| 393-512, gnl|bosTau2|chr23 (31763962-31763843) | |
| 393-512, gnl|canFam2|chr35 (6195428-6195549) | |
| 393-512, gnl|danRer3|chrNA (81281151-81281047) | |
| 393-512, gnl|dasNov1|scaffold_34225 (5947-6044) | |
| 393-512, gnl|echTel1|scaffold_194209 (8579-8690) | |
| 393-512, gnl|fr1|chrUn (46731931-46732033) | |
| 393-512, gnl|galGal2|chr2 (67396041-67396141) | |
| 393-512, gnl|hg17|chr6 (2840599-2840720) | |
| 393-512, gnl|Hg17|chr6 (2840741-2840622) | |
| 393-512, gnl|loxAfr1|scaffold_32295 (38293-38414) | |
| 393-512, gnl|mm7|chr13 (32521882-32522003) | |
| 393-512, gnl|Mm7|chr13 (32374315-32374434) | |
| 393-512, gnl|monDom2|scaffold_4 (68247370-68247268) | |
| 393-512, gnl|oryCun1|scaffold_80936 (5821-5918) | |
| 393-512, gnl|panTro1|chr5 (2855078-2855199) | |
| 393-512, gnl|rheMac2|chr4 (2761423-2761544) | |
| 393-512, gnl|rn3|chr17 (37650183-37650062) | |
| 393-512, gnl|tetNig1|chrUn_random (45314457-45314554) | |
| 393-512, gnl|xenTro1|scaffold_78 (749594-749694) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 74-257, gnl|bosTau2|chr23 (31766118-31765935) | |
| 74-257, gnl|canFam2|chr35 (6182343-6182580) | |
| 74-257, gnl|dasNov1|scaffold_34225 (10148-10352) | |
| 74-257, gnl|echTel1|scaffold_250028 (571-773) | |
| 74-257, gnl|fr1|chrUn (267184155-267183955) | |
| 74-257, gnl|galGal2|chr2 (67465775-67465992) | |
| 74-257, gnl|hg17|chr6 (2818117-2818344) | |
| 74-257, gnl|Hg17|chr6 (2845857-2845674) | |
| 74-257, gnl|loxAfr1|scaffold_21949 (30555-30782) | |
| 74-257, gnl|mm7|chr13 (32395180-32394996) | |
| 74-257, gnl|Mm7|chr13 (32372077-32372259) | |
| 74-257, gnl|oryCun1|scaffold_187490 (15485-15274) | |
| 74-257, gnl|panTro1|chr5 (2832478-2832704) | |
| 74-257, gnl|rheMac2|chr4 (2735992-2736219) | |
| 74-257, gnl|rn3|chr17 (37750929-37751115) | |
| 393-512, gnl|bosTau2|chr23 (31763962-31763843) | |
| 393-512, gnl|canFam2|chr35 (6195428-6195549) | |
| 393-512, gnl|danRer3|chrNA (81281151-81281047) | |
| 393-512, gnl|dasNov1|scaffold_34225 (5947-6044) | |
| 393-512, gnl|echTel1|scaffold_194209 (8579-8690) | |
| 393-512, gnl|fr1|chrUn (46731931-46732033) | |
| 393-512, gnl|galGal2|chr2 (67396041-67396141) | |
| 393-512, gnl|hg17|chr6 (2840599-2840720) | |
| 393-512, gnl|Hg17|chr6 (2840741-2840622) | |
| 393-512, gnl|loxAfr1|scaffold_32295 (38293-38414) | |
| 393-512, gnl|mm7|chr13 (32521882-32522003) | |
| 393-512, gnl|Mm7|chr13 (32374315-32374434) | |
| 393-512, gnl|monDom2|scaffold_4 (68247370-68247268) | |
| 393-512, gnl|oryCun1|scaffold_80936 (5821-5918) | |
| 393-512, gnl|panTro1|chr5 (2855078-2855199) | |
| 393-512, gnl|rheMac2|chr4 (2761423-2761544) | |
| 393-512, gnl|rn3|chr17 (37650183-37650062) | |
| 393-512, gnl|tetNig1|chrUn_random (45314457-45314554) | |
| 393-512, gnl|xenTro1|scaffold_78 (749594-749694) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) |