Non-Coding RNA Search

Ss1.1-Liv1-LVRM10049H10.5

Sequence:


               
               TGTTATTACAATTTGCATCTGCTCGAAAATCCATTGCTTGAAAGGCCTGGTCAGAGGAGG
TCACCTCATATTCTCCTATCTAATTCCAGAATGCGTTCAGAGAGCCTTGCTGCGATTGCT
TCATTACCTCTTCCATACACGAAACCACACCTTTGTTATCCTGCATCTCGTCTTGCAAGG
AATGGTTTATACTGAATACACCTGGGAAATATTTGGCCTCTGTCAAGAGCTGGAGTTCTC
CTTGTACTACCTTTTCCTGCCTTACCTGCTGCTGATTATCAATCTGGTTTTTTTTGCCCT
AACTTGCGTAACGGACCCTGGTACAGTAACAAAAGAAAATGAATCAGTGTTTCTTCAGGT
TTACGAATTTGATGAAGTGATGTTCCCGAAGAACGTGAGCTGCTCTACTTGCGATTTGAG
GAAACCAGCACGATCCAAGCACTGCAGTGTGTGTAACCGGTGCGTGCACCGTTTTGACCA
CCACTGTGTGTGGGTGAACAATTGCATCGGGGCCTGGAACACCAGGTACTTCCTCTTCTA
CCTCTTGACATTGACGGCCTCGGCTGCCACCATGGCCGTGGTGAGCACCGTGTTTCTGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTATTACAATTTGCATCTGCTCGAAAATCCATTGCTTGAAAGGCCTGGTCAGAGGAGG
TCACCTCATATTCTCCTATCTAATTCCAGAATGCGTTCAGAGAGCCTTGCTGCGATTGCT
TCATTACCTCTTCCATACACGAAACCACACCTTTGTTATCCTGCATCTCGTCTTGCAAGG
AATGGTTTATACTGAATACACCTGGGAAATATTTGGCCTCTGTCAAGAGCTGGAGTTCTC
CTTGTACTACCTTTTCCTGCCTTACCTGCTGCTGATTATCAATCTGGTTTTTTTTGCCCT
AACTTGCGTAACGGACCCTGGTACAGTAACAAAAGAAAATGAATCAGTGTTTCTTCAGGT
TTACGAATTTGATGAAGTGATGTTCCCGAAGAACGTGAGCTGCTCTACTTGCGATTTGAG
GAAACCAGCACGATCCAAGCACTGCAGTGTGTGTAACCGGTGCGTGCACCGTTTTGACCA
CCACTGTGTGTGGGTGAACAATTGCATCGGGGCCTGGAACACCAGGTACTTCCTCTTCTA
CCTCTTGACATTGACGGCCTCGGCTGCCACCATGGCCGTGGTGAGCACCGTGTTTCTGGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61553171|gb|AAX46361.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61553171|gb|AAX46361.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               11-597, gnl|bosTau2|chr10 (15425820-15426409)
               

               
               11-597, gnl|Hg17|chr13 (42406053-42406624)
               

               
               11-597, gnl|Mm7|chr5 (142359089-142353259)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-597, gnl|bosTau2|chr10 (15425820-15426409)
               

               
               11-597, gnl|Hg17|chr13 (42406053-42406624)
               

               
               11-597, gnl|Mm7|chr5 (142359089-142353259)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fhi (0.169578)
               

               
               ese (0.126502)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)
               

               
               ese (0.126502)

	11-597, gnl\|bosTau2\|chr10 (15425820-15426409)
	11-597, gnl\|Hg17\|chr13 (42406053-42406624)
	11-597, gnl\|Mm7\|chr5 (142359089-142353259)