Ss1.1-Liv1-LVRM10061F03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCAAAGTCCACGAGGAGATTGACCGCGTGATCGGCAGGAACCGCCAGGCCAAGTTCGAG GACTGGGCCAAGATGCCCTACACGGAGGCCGTGATCCACGAGATCCAGAGATTCGGAGAC ATGATCCCCATGGGCCTGGCCCGAAGAGTCACCAAGGATACCAAGTTTCGGGACTTCCTC CTCCCCAAGGGCACTGAGGTGTTCCCTATGCTGGGCTCTGTGCTGAGAGACCCCAAGTTC TTCTCCAACCCCCGAGGCTTCAACCCCCAGCACTTCCTGGATGAGAACGGGCAGTTTAAG AAGAATGATGCTTTTGTGCCCTTCTCCATCGGAAAGCGGTACTGTTTCGGAGAAGGTCTG GCTAGAATGGAGCTCTTCCTCTTCCTCACCAACATCCTGCAGAACTTCCACCTCAAGTCT CCGCAGCTGCCCCAGGACATCGACGTGTCCCCCAAACACGTGGGCTTCGCCACCATCCCC CCGACCTACACCATGAGCTTCCAGCCCCGCTGAGCCCGGGCTGTGCCAGGGCAGGGCTCG GGGGAGGAGCGAGGGGGCGGGGGCGGGGAGGGGGCGGGGCTAACGCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCAAAGTCCACGAGGAGATTGACCGCGTGATCGGCAGGAACCGCCAGGCCAAGTTCGAG GACTGGGCCAAGATGCCCTACACGGAGGCCGTGATCCACGAGATCCAGAGATTCGGAGAC ATGATCCCCATGGGCCTGGCCCGAAGAGTCACCAAGGATACCAAGTTTCGGGACTTCCTC CTCCCCAAGGGCACTGAGGTGTTCCCTATGCTGGGCTCTGTGCTGAGAGACCCCAAGTTC TTCTCCAACCCCCGAGGCTTCAACCCCCAGCACTTCCTGGATGAGAACGGGCAGTTTAAG AAGAATGATGCTTTTGTGCCCTTCTCCATCGGAAAGCGGTACTGTTTCGGAGAAGGTCTG GCTAGAATGGAGCTCTTCCTCTTCCTCACCAACATCCTGCAGAACTTCCACCTCAAGTCT CCGCAGCTGCCCCAGGACATCGACGTGTCCCCCAAACACGTGGGCTTCGCCACCATCCCC CCGACCTACACCATGAGCTTCCAGCCCCGCTGAGCCCGGGCTGTGCCAGGGCAGGGCTCG GGGGAGGAGCGAGGGGGCGGGGGCGGGGAGGGGGCGGGGCTAACGCCA |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-190, gnl|bosTau2|chr18 (45919241-45919052) | |
| 1-190, gnl|canFam2|chr1 (115842243-115842390) | |
| 1-190, gnl|danRer3|chr20 (27153951-27154098) | |
| 1-190, gnl|dasNov1|scaffold_290656 (151-4) | |
| 1-190, gnl|echTel1|scaffold_290566 (118942-119089) | |
| 1-190, gnl|fr1|chrUn (71435042-71434898) | |
| 1-190, gnl|hg17|chr19 (46043036-46043183) | |
| 1-190, gnl|Hg17|chr19 (46075123-46074934) | |
| 1-190, gnl|loxAfr1|scaffold_61989 (3337-3190) | |
| 1-190, gnl|mm7|chr7 (23953662-23953515) | |
| 1-190, gnl|Mm7|chr7 (23210012-23210201) | |
| 1-190, gnl|monDom2|scaffold_149 (547893-548040) | |
| 1-190, gnl|oryCun1|scaffold_107709 (4313-4460) | |
| 1-190, gnl|panTro1|chr20 (43292458-43292311) | |
| 1-190, gnl|rheMac2|chr19 (47221610-47221757) | |
| 1-190, gnl|rn3|chr1 (82139800-82139653) | |
| 1-190, gnl|tetNig1|chr3 (9911840-9911693) | |
| 1-190, gnl|xenTro1|scaffold_1232 (212105-211957) | |
| 326-515, gnl|bosTau2|chr18 (45941254-45941065) | |
| 326-515, gnl|Hg17|chr19 (46248381-46248189) | |
| 326-515, gnl|Mm7|chr7 (23717902-23718091) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-190, gnl|bosTau2|chr18 (45919241-45919052) | |
| 1-190, gnl|canFam2|chr1 (115842243-115842390) | |
| 1-190, gnl|danRer3|chr20 (27153951-27154098) | |
| 1-190, gnl|dasNov1|scaffold_290656 (151-4) | |
| 1-190, gnl|echTel1|scaffold_290566 (118942-119089) | |
| 1-190, gnl|fr1|chrUn (71435042-71434898) | |
| 1-190, gnl|hg17|chr19 (46043036-46043183) | |
| 1-190, gnl|Hg17|chr19 (46075123-46074934) | |
| 1-190, gnl|loxAfr1|scaffold_61989 (3337-3190) | |
| 1-190, gnl|mm7|chr7 (23953662-23953515) | |
| 1-190, gnl|Mm7|chr7 (23210012-23210201) | |
| 1-190, gnl|monDom2|scaffold_149 (547893-548040) | |
| 1-190, gnl|oryCun1|scaffold_107709 (4313-4460) | |
| 1-190, gnl|panTro1|chr20 (43292458-43292311) | |
| 1-190, gnl|rheMac2|chr19 (47221610-47221757) | |
| 1-190, gnl|rn3|chr1 (82139800-82139653) | |
| 1-190, gnl|tetNig1|chr3 (9911840-9911693) | |
| 1-190, gnl|xenTro1|scaffold_1232 (212105-211957) | |
| 326-515, gnl|bosTau2|chr18 (45941254-45941065) | |
| 326-515, gnl|Hg17|chr19 (46248381-46248189) | |
| 326-515, gnl|Mm7|chr7 (23717902-23718091) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cli (0.611247) | |
| nmm (0.132802) |