Non-Coding RNA Search

Ss1.1-Liv1-LVRM10074B09.5

Sequence:


               
               CCACTATGCACTTCCAGGACAGTCTGCCCAGGCTGCCTATTCCCAAACTTGAAGATACCA
TGAGAAGATACCTCAGTGCGCAGAAGCCTCTCTTGGATGATGGCCAGTTCAGGAAAACAG
AAGAATTGTGTAAGAATTTTGAAAATGGAATTGGGAAAAAACTGCACGAGCAGCTGGTTG
CTCAGGACAAGCAGAATAAACATACCAGCTACATTTCAGGCCCCTGGTTTGACATGTACC
TGACTGCTCGAAACCCCATTGTCTTGAACTTCAATCCGTTCATGGCGTTCCACCCCGACC
CAAAGTCCGAGTACAACGACCAGCTCACCCGGGCAACCAACCTGACGGTCTCTGCCCTCC
GGTTTCTGAAGGCACTTCGGGCCGGCCTCTTGGAGCCGGAAGTGTTCCACTTGAACCCGG
CCCGAAGTGACACGGCCACCTTCAAGCGGCTCATACGCTTGGTGCCTTCCGCCCTGTCCT
GGTACGGCGCCTACTTGGTCAAGGCCTACCCTCTGGATATGTCCCAGTATTTTCGGCTTT
TCAATTCCACTCGACTCCCCAGACCCTGTCGAGATGAACTCTTCACTGACGACAAGGCCA
GACACCTCCTGGTGCTCAGGAAGGGCCATTTCTATGTCTTTGACGTCCTGGATCAAGACG
GGAAGATTGTGAGCGCCTCCGAAATTCAGGCTCATCTGAAGTACATTCTCTCGGACCGCA
GCCTGGCCCCCGAGTTTCCGCTGGCCTATCTGACCAGCGAGGACCGGGACATCTGGGCGG
GGCTCAGGCAGAAGCTGGTGCAGGGTGGCAACGAGGAGACCCTGCGGAGAGTGGACGTTG
CTGTGTTCTGCCTCTGCCTAGACGACTTCCCGGTGAAGGACCTCATCCACTTGTCCCATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACTATGCACTTCCAGGACAGTCTGCCCAGGCTGCCTATTCCCAAACTTGAAGATACCA
TGAGAAGATACCTCAGTGCGCAGAAGCCTCTCTTGGATGATGGCCAGTTCAGGAAAACAG
AAGAATTGTGTAAGAATTTTGAAAATGGAATTGGGAAAAAACTGCACGAGCAGCTGGTTG
CTCAGGACAAGCAGAATAAACATACCAGCTACATTTCAGGCCCCTGGTTTGACATGTACC
TGACTGCTCGAAACCCCATTGTCTTGAACTTCAATCCGTTCATGGCGTTCCACCCCGACC
CAAAGTCCGAGTACAACGACCAGCTCACCCGGGCAACCAACCTGACGGTCTCTGCCCTCC
GGTTTCTGAAGGCACTTCGGGCCGGCCTCTTGGAGCCGGAAGTGTTCCACTTGAACCCGG
CCCGAAGTGACACGGCCACCTTCAAGCGGCTCATACGCTTGGTGCCTTCCGCCCTGTCCT
GGTACGGCGCCTACTTGGTCAAGGCCTACCCTCTGGATATGTCCCAGTATTTTCGGCTTT
TCAATTCCACTCGACTCCCCAGACCCTGTCGAGATGAACTCTTCACTGACGACAAGGCCA
GACACCTCCTGGTGCTCAGGAAGGGCCATTTCTATGTCTTTGACGTCCTGGATCAAGACG
GGAAGATTGTGAGCGCCTCCGAAATTCAGGCTCATCTGAAGTACATTCTCTCGGACCGCA
GCCTGGCCCCCGAGTTTCCGCTGGCCTATCTGACCAGCGAGGACCGGGACATCTGGGCGG
GGCTCAGGCAGAAGCTGGTGCAGGGTGGCAACGAGGAGACCCTGCGGAGAGTGGACGTTG
CTGTGTTCTGCCTCTGCCTAGACGACTTCCCGGTGAAGGACCTCATCCACTTGTCCCATA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|53131958|emb|CAG31860.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|53131958|emb|CAG31860.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               214-898, gnl|bosTau2|chr12 (48414661-48413977)
               

               
               214-898, gnl|Hg17|chr1 (53387702-53388386)
               

               
               214-898, gnl|Mm7|chr4 (107284670-107283986)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               214-898, gnl|bosTau2|chr12 (48414661-48413977)
               

               
               214-898, gnl|Hg17|chr1 (53387702-53388386)
               

               
               214-898, gnl|Mm7|chr4 (107284670-107283986)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cty (0.10408)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	214-898, gnl\|bosTau2\|chr12 (48414661-48413977)
	214-898, gnl\|Hg17\|chr1 (53387702-53388386)
	214-898, gnl\|Mm7\|chr4 (107284670-107283986)