Ss1.1-Liv1-LVRM10076C08.5
|
AAAACTCACTCTGACAGCAAGCCCTATGGCCCCACGTCTGTGGGTTTGGATTTCTCTCTG
CCAGGCATGGAACATGTGTATGGGATCCCCGAGCATGCAGACAGCCTGAGGCTAAAAGTC
ACTGAGGGTGGGGATCCATATCGCCTCTACAATTTGGACGTGTTCCAGTATGAGCTGTAC
AACCCCATGGCCCTGTACGGCTCCGTGCCTGTGCTCCTGGCACACAGCCCTCACAGGGAC
CTGGGCATCTTCTGGCTCAACGCTGCAGAGACCTGGGTTGACATATCCTCCAACACTGCA
GGGAAGACCCTGTTTGGGAAGATGCTGGACTACCTACAGGGCTCTGGGGAGACCCCACAG
ACAGATGTTCGCTGGATGTCGGAGAGCGGCATCATCGATGTCTTCCTGCTCCTTGGGCCC
TCCGTCTTCGATGTCTTCCGGCAGTACGCTAGTCTCACTGGGACCCAGGCATTGCCCCCG
CTCTTCTCCCTCGGCTACCACCAGAGCCGCTGGAACTATCGAGATGAGGCCGATGTCCTG
GAAGTTAATCAGGGCTTTGATGATCACAACCTGCCCTGTGATTTCATCTGGCTGGACATC
GAGCATGCTGATGGCAAGCGGTACTTCACCTGGGACCCCAGCCGCTTCCCCCAGCCCCGC
ACCATGCTTGAGCACTTGGCCTCTAAGAGGCGCAAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAAACTCACTCTGACAGCAAGCCCTATGGCCCCACGTCTGTGGGTTTGGATTTCTCTCTG
CCAGGCATGGAACATGTGTATGGGATCCCCGAGCATGCAGACAGCCTGAGGCTAAAAGTC
ACTGAGGGTGGGGATCCATATCGCCTCTACAATTTGGACGTGTTCCAGTATGAGCTGTAC
AACCCCATGGCCCTGTACGGCTCCGTGCCTGTGCTCCTGGCACACAGCCCTCACAGGGAC
CTGGGCATCTTCTGGCTCAACGCTGCAGAGACCTGGGTTGACATATCCTCCAACACTGCA
GGGAAGACCCTGTTTGGGAAGATGCTGGACTACCTACAGGGCTCTGGGGAGACCCCACAG
ACAGATGTTCGCTGGATGTCGGAGAGCGGCATCATCGATGTCTTCCTGCTCCTTGGGCCC
TCCGTCTTCGATGTCTTCCGGCAGTACGCTAGTCTCACTGGGACCCAGGCATTGCCCCCG
CTCTTCTCCCTCGGCTACCACCAGAGCCGCTGGAACTATCGAGATGAGGCCGATGTCCTG
GAAGTTAATCAGGGCTTTGATGATCACAACCTGCCCTGTGATTTCATCTGGCTGGACATC
GAGCATGCTGATGGCAAGCGGTACTTCACCTGGGACCCCAGCCGCTTCCCCCAGCCCCGC
ACCATGCTTGAGCACTTGGCCTCTAAGAGGCGCAAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
126-306, gnl|bosTau2|chr29 (32077652-32077472) |
|
126-306, gnl|canFam2|chr18 (57037369-57037204) |
|
126-306, gnl|danRer3|chrUn (170814311-170814166) |
|
126-306, gnl|echTel1|scaffold_300819 (4986-5151) |
|
126-306, gnl|fr1|chrUn (28069142-28069003) |
|
126-306, gnl|galGal2|chr5 (22888807-22888667) |
|
126-306, gnl|hg17|chr11 (62156583-62156748) |
|
126-306, gnl|Hg17|chr11 (62156793-62156613) |
|
126-306, gnl|loxAfr1|scaffold_7523 (63443-63277) |
|
126-306, gnl|mm7|chr19 (8589805-8589642) |
|
126-306, gnl|Mm7|chr19 (8589595-8589775) |
|
126-306, gnl|monDom2|scaffold_150 (883884-884047) |
|
126-306, gnl|oryCun1|scaffold_210230 (51041-50876) |
|
126-306, gnl|panTro1|chr9 (63153098-63153263) |
|
126-306, gnl|rheMac2|chr14 (11458573-11458408) |
|
126-306, gnl|rn3|chr1 (211745186-211745022) |
|
126-306, gnl|tetNig1|chr1 (7874141-7874280) |
|
126-306, gnl|xenTro1|scaffold_2041 (4286-4137) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
126-306, gnl|bosTau2|chr29 (32077652-32077472) |
|
126-306, gnl|canFam2|chr18 (57037369-57037204) |
|
126-306, gnl|danRer3|chrUn (170814311-170814166) |
|
126-306, gnl|echTel1|scaffold_300819 (4986-5151) |
|
126-306, gnl|fr1|chrUn (28069142-28069003) |
|
126-306, gnl|galGal2|chr5 (22888807-22888667) |
|
126-306, gnl|hg17|chr11 (62156583-62156748) |
|
126-306, gnl|Hg17|chr11 (62156793-62156613) |
|
126-306, gnl|loxAfr1|scaffold_7523 (63443-63277) |
|
126-306, gnl|mm7|chr19 (8589805-8589642) |
|
126-306, gnl|Mm7|chr19 (8589595-8589775) |
|
126-306, gnl|monDom2|scaffold_150 (883884-884047) |
|
126-306, gnl|oryCun1|scaffold_210230 (51041-50876) |
|
126-306, gnl|panTro1|chr9 (63153098-63153263) |
|
126-306, gnl|rheMac2|chr14 (11458573-11458408) |
|
126-306, gnl|rn3|chr1 (211745186-211745022) |
|
126-306, gnl|tetNig1|chr1 (7874141-7874280) |
|
126-306, gnl|xenTro1|scaffold_2041 (4286-4137) |
|
eep (0.245128) |
|
nje (0.16592) |
|
eep (0.245128) |
|
nje (0.16592) |
