Ss1.1-Liv1-LVRM10078G10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCATGGCCGCTGCCGCTCGCGCCCGGGTAGCACACTTGCTGAGGCAACTGCAGCGCGCAG CATGCCAGTGTCCAAGTCATTCTCATACTTATTCCCAAGCTCCTGGATTTTCACCTTCTG GGAAAACAACAGATTATGCCTTTGAGATGGCTGTTTCAAATATTAGATATGGAGCAGGAG TTACAAAGGAAGTGGGCATGGATCTCCAAAACATGGGTGCTACAAATGTTTGTTTGATGA CAGACAAGAACCTCTCCCAACTCCCTCCTGTACAGACAGTCATGGATTCCCTAGTGAAGA ATGGCATAAACTTCAAGGTTTATGATAACGTGAGGGTGGAACCCACCCAGAGAAGCTTCA TGGAAGCTATTGAATTTGCCAAAAAGGGAGCATTTGATGCCTACGTGGCCGTGGGGGGCG GCTCCACCATGGACACCTGTAAAGCCGCTAATCTGTATGCGTCCAGCCCCCACTCTGAGT TCCTAGACTATGTCAGTGCCCCCATTGGGAAGGGGAAGCCAGTGACTGTGCCTCTGAAGC CTCTGATTGCAGTCCCAACTACCTCAGGAACTGGGAGTGAAACTACCGGAGTTGCCGTTT TTGACTATGAACACTTAAAAGTAAAAACTGGCATTGCTTCGAGAGCCATCAAACCCACCC TGGGCCTGATCGATCCTCTGCACACACGGCACATGCCTGACGGGGTGGTGGCCAACAGCG GCTTCGATGTGCTCTGCCACGCCCTGGAGTCCTACACGGCCCTCCCCTACCACATGCGGA GCCCCTGCCCTTCCAGCCCCATCGCTCGGCCAGCCTACCAGGGCAGCAACCCCATCAGCG ACATCTGGGCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCATGGCCGCTGCCGCTCGCGCCCGGGTAGCACACTTGCTGAGGCAACTGCAGCGCGCAG CATGCCAGTGTCCAAGTCATTCTCATACTTATTCCCAAGCTCCTGGATTTTCACCTTCTG GGAAAACAACAGATTATGCCTTTGAGATGGCTGTTTCAAATATTAGATATGGAGCAGGAG TTACAAAGGAAGTGGGCATGGATCTCCAAAACATGGGTGCTACAAATGTTTGTTTGATGA CAGACAAGAACCTCTCCCAACTCCCTCCTGTACAGACAGTCATGGATTCCCTAGTGAAGA ATGGCATAAACTTCAAGGTTTATGATAACGTGAGGGTGGAACCCACCCAGAGAAGCTTCA TGGAAGCTATTGAATTTGCCAAAAAGGGAGCATTTGATGCCTACGTGGCCGTGGGGGGCG GCTCCACCATGGACACCTGTAAAGCCGCTAATCTGTATGCGTCCAGCCCCCACTCTGAGT TCCTAGACTATGTCAGTGCCCCCATTGGGAAGGGGAAGCCAGTGACTGTGCCTCTGAAGC CTCTGATTGCAGTCCCAACTACCTCAGGAACTGGGAGTGAAACTACCGGAGTTGCCGTTT TTGACTATGAACACTTAAAAGTAAAAACTGGCATTGCTTCGAGAGCCATCAAACCCACCC TGGGCCTGATCGATCCTCTGCACACACGGCACATGCCTGACGGGGTGGTGGCCAACAGCG GCTTCGATGTGCTCTGCCACGCCCTGGAGTCCTACACGGCCCTCCCCTACCACATGCGGA GCCCCTGCCCTTCCAGCCCCATCGCTCGGCCAGCCTACCAGGGCAGCAACCCCATCAGCG ACATCTGGGCAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 353-552, gnl|bosTau2|chr14 (19238852-19238653) | |
| 353-552, gnl|canFam2|chr29 (19029624-19029912) | |
| 353-552, gnl|dasNov1|scaffold_80358 (2923-2624) | |
| 353-552, gnl|echTel1|scaffold_265202 (23901-23611) | |
| 353-552, gnl|galGal2|chrUn (151106997-151107268) | |
| 353-552, gnl|hg17|chr8 (67519921-67520218) | |
| 353-552, gnl|Hg17|chr8 (67520004-67520203) | |
| 353-552, gnl|mm7|chr1 (9696236-9696538) | |
| 353-552, gnl|Mm7|chr1 (9696324-9696523) | |
| 353-552, gnl|monDom2|scaffold_4 (95125446-95125147) | |
| 353-552, gnl|oryCun1|scaffold_181499 (12170-11874) | |
| 353-552, gnl|panTro1|chr7 (69530397-69530694) | |
| 353-552, gnl|rheMac2|chr8 (69069628-69069925) | |
| 353-552, gnl|rn3|chr5 (9297538-9297234) | |
| 353-552, gnl|xenTro1|scaffold_109 (80677-80946) | |
| 736-852, gnl|bosTau2|chr14 (19231433-19231317) | |
| 736-852, gnl|canFam2|chr29 (19036127-19036295) | |
| 736-852, gnl|echTel1|scaffold_265202 (19588-19420) | |
| 736-852, gnl|fr1|chrUn (325480606-325480438) | |
| 736-852, gnl|galGal2|chrUn (151109542-151109707) | |
| 736-852, gnl|hg17|chr8 (67526730-67526898) | |
| 736-852, gnl|Hg17|chr8 (67526741-67526857) | |
| 736-852, gnl|mm7|chr1 (9700825-9700993) | |
| 736-852, gnl|Mm7|chr1 (9700836-9700952) | |
| 736-852, gnl|monDom2|scaffold_4 (95121758-95121585) | |
| 736-852, gnl|oryCun1|scaffold_181499 (4398-4230) | |
| 736-852, gnl|rheMac2|chr8 (69076366-69076534) | |
| 736-852, gnl|rn3|chr5 (9292535-9292367) | |
| 736-852, gnl|tetNig1|chr15_random (106317-106150) | |
| 736-852, gnl|xenTro1|scaffold_109 (83298-83462) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 353-552, gnl|bosTau2|chr14 (19238852-19238653) | |
| 353-552, gnl|canFam2|chr29 (19029624-19029912) | |
| 353-552, gnl|dasNov1|scaffold_80358 (2923-2624) | |
| 353-552, gnl|echTel1|scaffold_265202 (23901-23611) | |
| 353-552, gnl|galGal2|chrUn (151106997-151107268) | |
| 353-552, gnl|hg17|chr8 (67519921-67520218) | |
| 353-552, gnl|Hg17|chr8 (67520004-67520203) | |
| 353-552, gnl|mm7|chr1 (9696236-9696538) | |
| 353-552, gnl|Mm7|chr1 (9696324-9696523) | |
| 353-552, gnl|monDom2|scaffold_4 (95125446-95125147) | |
| 353-552, gnl|oryCun1|scaffold_181499 (12170-11874) | |
| 353-552, gnl|panTro1|chr7 (69530397-69530694) | |
| 353-552, gnl|rheMac2|chr8 (69069628-69069925) | |
| 353-552, gnl|rn3|chr5 (9297538-9297234) | |
| 353-552, gnl|xenTro1|scaffold_109 (80677-80946) | |
| 736-852, gnl|bosTau2|chr14 (19231433-19231317) | |
| 736-852, gnl|canFam2|chr29 (19036127-19036295) | |
| 736-852, gnl|echTel1|scaffold_265202 (19588-19420) | |
| 736-852, gnl|fr1|chrUn (325480606-325480438) | |
| 736-852, gnl|galGal2|chrUn (151109542-151109707) | |
| 736-852, gnl|hg17|chr8 (67526730-67526898) | |
| 736-852, gnl|Hg17|chr8 (67526741-67526857) | |
| 736-852, gnl|mm7|chr1 (9700825-9700993) | |
| 736-852, gnl|Mm7|chr1 (9700836-9700952) | |
| 736-852, gnl|monDom2|scaffold_4 (95121758-95121585) | |
| 736-852, gnl|oryCun1|scaffold_181499 (4398-4230) | |
| 736-852, gnl|rheMac2|chr8 (69076366-69076534) | |
| 736-852, gnl|rn3|chr5 (9292535-9292367) | |
| 736-852, gnl|tetNig1|chr15_random (106317-106150) | |
| 736-852, gnl|xenTro1|scaffold_109 (83298-83462) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |