Non-Coding RNA Search

Ss1.1-Liv1-LVRM10102B01.5

Sequence:


               
               AGCACAGTTTCGGTTTTGGCAGCAGCATCCAGTGTCCTGCCCGAGGCTTCTAGAAAGGCA
GGGGTTGCCGACTGGTCAACAGGCTGTGCCCCGAAACCGAGTCGACGGAATAGAAGGAAG
TAGCTAAAACAACCACGCAAGAAGGTGGTCTGGGCGGCACAGCCTTGAGGAGCCACAAGC
CATGACACGCTTCTTCTACGCCTGCCTGCTGGCTATCTTCCCAGTGGTCTCCATGAAGAG
TCCCATATTCGGTCCCCAGGATGTGAGCAGCGTGGAAGGCAGCTCGGTGTCCATCAGATG
CTACTACCCAGCCACCTCCGTCAACCGGCATTCTCGGAAGTACTGGTGCCGAATAGGAGC
CAAGGGCCGCTGCACAACCCTCATCTCCTCGGAGGGCTACATCTCCAAGGACTACAAGGG
CAGAGCCAACCTCACCAACTTCCCAGAGAACGGCACCTTCGTGATGGACATTGGCCACCT
GACCCGCGGTGACTCTGGGCTCTACAAGTGTGGTCTGGGCATTAGCAGCCGAGGCCTGTC
TTTTGATGTGAGCCTGGAGGTCAGCCAAGGTCCTGGACAGATAGGTGATGTCCACGTCTA
CACAGCAGACCTGGGCAGCACAGTAACCATCAACTGCCCTTTCAAGTCTGAGAATGCTCA
GAAGCCGAAATCCGTGTACAAGAAACTGGGCCAGATCCGCGTCCTGGTCATCGACTCCAA
TGGGTATTTGAACAACAACTTTACCAACAGAGCACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCACAGTTTCGGTTTTGGCAGCAGCATCCAGTGTCCTGCCCGAGGCTTCTAGAAAGGCA
GGGGTTGCCGACTGGTCAACAGGCTGTGCCCCGAAACCGAGTCGACGGAATAGAAGGAAG
TAGCTAAAACAACCACGCAAGAAGGTGGTCTGGGCGGCACAGCCTTGAGGAGCCACAAGC
CATGACACGCTTCTTCTACGCCTGCCTGCTGGCTATCTTCCCAGTGGTCTCCATGAAGAG
TCCCATATTCGGTCCCCAGGATGTGAGCAGCGTGGAAGGCAGCTCGGTGTCCATCAGATG
CTACTACCCAGCCACCTCCGTCAACCGGCATTCTCGGAAGTACTGGTGCCGAATAGGAGC
CAAGGGCCGCTGCACAACCCTCATCTCCTCGGAGGGCTACATCTCCAAGGACTACAAGGG
CAGAGCCAACCTCACCAACTTCCCAGAGAACGGCACCTTCGTGATGGACATTGGCCACCT
GACCCGCGGTGACTCTGGGCTCTACAAGTGTGGTCTGGGCATTAGCAGCCGAGGCCTGTC
TTTTGATGTGAGCCTGGAGGTCAGCCAAGGTCCTGGACAGATAGGTGATGTCCACGTCTA
CACAGCAGACCTGGGCAGCACAGTAACCATCAACTGCCCTTTCAAGTCTGAGAATGCTCA
GAAGCCGAAATCCGTGTACAAGAAACTGGGCCAGATCCGCGTCCTGGTCATCGACTCCAA
TGGGTATTTGAACAACAACTTTACCAACAGAGCACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               213-571, gnl|bosTau2|chr16 (3961995-3962353)
               

               
               213-571, gnl|Hg17|chr1 (203501215-203500857)
               

               
               213-571, gnl|Mm7|chr1 (130745566-130745925)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               213-571, gnl|bosTau2|chr16 (3961995-3962353)
               

               
               213-571, gnl|Hg17|chr1 (203501215-203500857)
               

               
               213-571, gnl|Mm7|chr1 (130745566-130745925)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	213-571, gnl\|bosTau2\|chr16 (3961995-3962353)
	213-571, gnl\|Hg17\|chr1 (203501215-203500857)
	213-571, gnl\|Mm7\|chr1 (130745566-130745925)