Ss1.1-Liv1-LVRM10103C10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATAACGTTTTGCTGCTGTCAGAAACAACCTTTCGCTCTCCGGCCAAACTCCAAAGCTTG GATTCACCGAGCTCCAAGCCTCCGCCCCACCTCCTCGCCCGGAGTGGCTCCGCTGGATTC TTGCAGCCGCGGAGGAGAGGACGGGAGAGGGGGATCAGCTTTCCCTGGGGGGGTCACTAG CACCAAGGTGTGGCTGTTGGGGTGTTGCTTTTCTGCGGCTCTCTTTTTTAAAGATTGCTT AACAAACAGCACTGTAGATCTCCCCCCATGACAATGTCTTCCATTAAGATTGAGTGCGTT TTGCGGGAGAACTGCCACTGCGGTGAGTCGCCCGTGTGGGAGGAAGCGTCCAACTCTCTG CTCTTCGTGGATATTCCCGCCAAAAAGGTTTGCCGGTGGAATGCGCTCAGCAAGCAAGTG CAGCGAGTGACCCTGGATGCTCCTGTCAGCTCTGTGGCCCTTCGCCAGGCAGGAGGCTAT GTCGCCACAGTTGGAACAAAGTTCTGTGCTTTGAACTGGGAAGATGAGTCAGCAGTTGTC TTGGCCGCTGTCGATAAAGACAAGAAAAACAATCGATTCAATGACGGGAAGGTGGATCCC GCTGGGAGATACTTTGCTGGAACCATGGCTGAGGAAACAGCGCCGGCGGTTCTGGAACGG CACCAGGGGTCCCTGTACGCCCTCTTTGCCGACCACCACGTGGAAAAGTACTTTGATCAG GTGGACATCTCCAATGGTTTGGATTGGTCTCTGGACCACAAAATCTTCTATTACATCGAT AGCCTGTCCTACTCCGTGGATGCCTTTGACTATGACCTGCAGACAGGAAAGATTTCCAAC CGCAGAAGCATTTACAAGATGGAGAAAGAAGAACACATCCCAGATGGAATGTGCATTGAT ACTGAGGGGAAGCTCTGGGTGGCCTGTTACAATGGAGGAAGAGTGATCCGCCTGGATCCT GAGACAGGGAAAAGACTCCAAACCGTGAAGTTGCCTGTTGATAAAACAACCTCATGCTGC TTTGGAGGGAAGGATTACTCTGAAATGTACGTGACCTGTGCCCGGGATGGGCTAGACCCT CAGGGTCTTTTGCAGCAACCTGAGGCTGGTGGAATCTTCAAGATAACTGGCCTGGGGGTC AAAGGACTTCCTCCATATCCTTATGCAGGATGAGTGACAAGCCTTCTTTCCTATTGCAGG AGACTTTGAAGACAACTAGAAAATTCGGGAGCTGAGATTTCAGTCTAGCTACCCCAAAAA AATGAAGCAATGAGATTATTAATAGCATTAAATTTTTACTGACAATTTTTAAAAGGCAGA GCATTTTTAACAAAGGGTGATGGGTGCTTTTGATAACATAAGACGTTTTGCAAAGGTGCT ATAGAAATATAGAGTTGGCAGTTCCCTGGTGGCCTAGCGGTTAAGAATCCAGTGCTATCA CTGCTGTGGTTCGGGTTCAGTCCCTGGCCTGGGAACTTCCACATGCCACAGGGGTGGCCA AAAAAATAAGAAATGTAGTTTTTCAGCTGTCAACCCAGCCTCTTGAGTCTTTGAAATTGC TGGTGGAGTGGGGGAAGAGGGAAGGGACCATATCTGCTCTTTATTCTGCATACTACACCC AAAGCTTCAAAACACTAATAAATAGTAGTTTGGTAATGAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATAACGTTTTGCTGCTGTCAGAAACAACCTTTCGCTCTCCGGCCAAACTCCAAAGCTTG GATTCACCGAGCTCCAAGCCTCCGCCCCACCTCCTCGCCCGGAGTGGCTCCGCTGGATTC TTGCAGCCGCGGAGGAGAGGACGGGAGAGGGGGATCAGCTTTCCCTGGGGGGGTCACTAG CACCAAGGTGTGGCTGTTGGGGTGTTGCTTTTCTGCGGCTCTCTTTTTTAAAGATTGCTT AACAAACAGCACTGTAGATCTCCCCCCATGACAATGTCTTCCATTAAGATTGAGTGCGTT TTGCGGGAGAACTGCCACTGCGGTGAGTCGCCCGTGTGGGAGGAAGCGTCCAACTCTCTG CTCTTCGTGGATATTCCCGCCAAAAAGGTTTGCCGGTGGAATGCGCTCAGCAAGCAAGTG CAGCGAGTGACCCTGGATGCTCCTGTCAGCTCTGTGGCCCTTCGCCAGGCAGGAGGCTAT GTCGCCACAGTTGGAACAAAGTTCTGTGCTTTGAACTGGGAAGATGAGTCAGCAGTTGTC TTGGCCGCTGTCGATAAAGACAAGAAAAACAATCGATTCAATGACGGGAAGGTGGATCCC GCTGGGAGATACTTTGCTGGAACCATGGCTGAGGAAACAGCGCCGGCGGTTCTGGAACGG CACCAGGGGTCCCTGTACGCCCTCTTTGCCGACCACCACGTGGAAAAGTACTTTGATCAG GTGGACATCTCCAATGGTTTGGATTGGTCTCTGGACCACAAAATCTTCTATTACATCGAT AGCCTGTCCTACTCCGTGGATGCCTTTGACTATGACCTGCAGACAGGAAAGATTTCCAAC CGCAGAAGCATTTACAAGATGGAGAAAGAAGAACACATCCCAGATGGAATGTGCATTGAT ACTGAGGGGAAGCTCTGGGTGGCCTGTTACAATGGAGGAAGAGTGATCCGCCTGGATCCT GAGACAGGGAAAAGACTCCAAACCGTGAAGTTGCCTGTTGATAAAACAACCTCATGCTGC TTTGGAGGGAAGGATTACTCTGAAATGTACGTGACCTGTGCCCGGGATGGGCTAGACCCT CAGGGTCTTTTGCAGCAACCTGAGGCTGGTGGAATCTTCAAGATAACTGGCCTGGGGGTC AAAGGACTTCCTCCATATCCTTATGCAGGATGAGTGACAAGCCTTCTTTCCTATTGCAGG AGACTTTGAAGACAACTAGAAAATTCGGGAGCTGAGATTTCAGTCTAGCTACCCCAAAAA AATGAAGCAATGAGATTATTAATAGCATTAAATTTTTACTGACAATTTTTAAAAGGCAGA GCATTTTTAACAAAGGGTGATGGGTGCTTTTGATAACATAAGACGTTTTGCAAAGGTGCT ATAGAAATATAGAGTTGGCAGTTCCCTGGTGGCCTAGCGGTTAAGAATCCAGTGCTATCA CTGCTGTGGTTCGGGTTCAGTCCCTGGCCTGGGAACTTCCACATGCCACAGGGGTGGCCA AAAAAATAAGAAATGTAGTTTTTCAGCTGTCAACCCAGCCTCTTGAGTCTTTGAAATTGC TGGTGGAGTGGGGGAAGAGGGAAGGGACCATATCTGCTCTTTATTCTGCATACTACACCC AAAGCTTCAAAACACTAATAAATAGTAGTTTGGTAATGAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 1-144, gnl|bosTau2|chrX (24747733-24747879) | |
| 1-144, gnl|Hg17|chrX (46693752-46693903) | |
| 1-144, gnl|Mm7|chrX (18981170-18981331) | |
| 254-436, gnl|bosTau2|chrX (24749859-24750040) | |
| 254-436, gnl|Hg17|chrX (46696779-46696960) | |
| 254-436, gnl|Mm7|chrX (18983512-18983691) | |
| 613-833, gnl|bosTau2|chrX (24760391-24760611) | |
| 613-833, gnl|Hg17|chrX (46705422-46705642) | |
| 613-833, gnl|Mm7|chrX (18990655-18990875) | |
| 836-968, gnl|bosTau2|chrX (24762188-24762320) | |
| 836-968, gnl|Hg17|chrX (46707331-46707463) | |
| 836-968, gnl|Mm7|chrX (18992505-18992637) | |
| 1121-1397, gnl|bosTau2|chrX (24763744-24764017) | |
| 1121-1397, gnl|Hg17|chrX (46708548-46708831) | |
| 1121-1397, gnl|Mm7|chrX (18994583-18994957) | |
| 1509-1659, gnl|bosTau2|chrX (24764003-24764165) | |
| 1509-1659, gnl|canFam2|chrX (40662647-40662820) | |
| 1509-1659, gnl|dasNov1|scaffold_12908 (58510-58330) | |
| 1509-1659, gnl|echTel1|scaffold_275944 (6040-6201) | |
| 1509-1659, gnl|hg17|chrX (46708799-46708973) | |
| 1509-1659, gnl|Hg17|chrX (46708815-46708964) | |
| 1509-1659, gnl|loxAfr1|scaffold_16281 (41725-41894) | |
| 1509-1659, gnl|mm7|chrX (18994922-18995092) | |
| 1509-1659, gnl|Mm7|chrX (18994941-18995094) | |
| 1509-1659, gnl|monDom2|scaffold_47 (2141147-2141002) | |
| 1509-1659, gnl|oryCun1|scaffold_178689 (97946-98124) | |
| 1509-1659, gnl|panTro1|chrX (48287545-48287719) | |
| 1509-1659, gnl|rheMac2|chrX (44928027-44928201) | |
| 1509-1659, gnl|rn3|chrX (13043026-13042871) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-144, gnl|bosTau2|chrX (24747733-24747879) | |
| 1-144, gnl|Hg17|chrX (46693752-46693903) | |
| 1-144, gnl|Mm7|chrX (18981170-18981331) | |
| 254-436, gnl|bosTau2|chrX (24749859-24750040) | |
| 254-436, gnl|Hg17|chrX (46696779-46696960) | |
| 254-436, gnl|Mm7|chrX (18983512-18983691) | |
| 613-833, gnl|bosTau2|chrX (24760391-24760611) | |
| 613-833, gnl|Hg17|chrX (46705422-46705642) | |
| 613-833, gnl|Mm7|chrX (18990655-18990875) | |
| 836-968, gnl|bosTau2|chrX (24762188-24762320) | |
| 836-968, gnl|Hg17|chrX (46707331-46707463) | |
| 836-968, gnl|Mm7|chrX (18992505-18992637) | |
| 1121-1397, gnl|bosTau2|chrX (24763744-24764017) | |
| 1121-1397, gnl|Hg17|chrX (46708548-46708831) | |
| 1121-1397, gnl|Mm7|chrX (18994583-18994957) | |
| 1509-1659, gnl|bosTau2|chrX (24764003-24764165) | |
| 1509-1659, gnl|canFam2|chrX (40662647-40662820) | |
| 1509-1659, gnl|dasNov1|scaffold_12908 (58510-58330) | |
| 1509-1659, gnl|echTel1|scaffold_275944 (6040-6201) | |
| 1509-1659, gnl|hg17|chrX (46708799-46708973) | |
| 1509-1659, gnl|Hg17|chrX (46708815-46708964) | |
| 1509-1659, gnl|loxAfr1|scaffold_16281 (41725-41894) | |
| 1509-1659, gnl|mm7|chrX (18994922-18995092) | |
| 1509-1659, gnl|Mm7|chrX (18994941-18995094) | |
| 1509-1659, gnl|monDom2|scaffold_47 (2141147-2141002) | |
| 1509-1659, gnl|oryCun1|scaffold_178689 (97946-98124) | |
| 1509-1659, gnl|panTro1|chrX (48287545-48287719) | |
| 1509-1659, gnl|rheMac2|chrX (44928027-44928201) | |
| 1509-1659, gnl|rn3|chrX (13043026-13042871) |
| Expressed library(ies): 9 entry(ies) | More info |
| Expressed library(ies): 9 entry(ies) | Help | Less info |
| lun (1.20391) | |
| cli (0.91687) | |
| eli (0.455443) | |
| cki (0.330469) | |
| fli (0.202881) | |
| sto (0.179824) | |
| bla (0.124347) | |
| jej (0.0989218) | |
| eje (0.0988338) |
| Expressed library(ies): 9 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lun (1.20391) | |
| cli (0.91687) | |
| eli (0.455443) | |
| cki (0.330469) | |
| fli (0.202881) | |
| sto (0.179824) | |
| bla (0.124347) | |
| jej (0.0989218) | |
| eje (0.0988338) |