Non-Coding RNA Search

Ss1.1-Liv1-LVRM10109D04.5

Sequence:


               
               GTTGAAGTTTATTTGCCGAACATCCCTTGCTGGCGATACCAGCAATAGTTCTTCCCCAGC
CTCCACAGGTGCCAAAACTAACCGGGCAGGTAAGTCCCTGCTCCTGCACTTCTCCCTCAG
GATGACGGGGAGGGGACTGGCCAGGCTGGGGATTTGGCAACAGCAGCCGCTCATCTGTGC
CTGGCTACTCCCCACCGGGCAAATCGTGAGTAGCAGATTCCCTGCTGGCCTTGACTTTTG
CTCCTGTCAGCACAGCCAGCTTGAACCTTGCCTTCTGAGAGCAGATGCTCCCACAGCCAA
AGCCAGCCCCACTGTTGTTGATCAGAAATGATCATGTTTGAGAGGATGTCGAGGGAAGAA
AGGCCTCCCTCAGAAGCCCAGCCAGTGTTGAACATGGCAGTTTGCTAGTAATTTTTCCAA
CACCCTGTGTTTATTATCACTGCTGGGGAGCCAAGAAAGTCCGGGAAGGATCACAGCTTT
GCCCCTGTTGATGTTCCTTGTGGGAACCTGGGGTTTGGCCTCCATTTCCTGCTCTGTTCG
CTGTGGCTTCGCCCGGGTTCTCAGTCTCCCCACGCAGCTAGCAGGCGCTATCTTCTGTGC
CAAGGCCGTGGGGCAGCCCTGCTCGATGATGGGGGCCTGTGAGGCAGCAGTGCTGCCAAT
AGAAGCTGGTTTCTAATCCTCAGGAGGCTTCTCAGAAGCACAAAGCCAGAAAAGATTTCT
GCAACTTCTGTGTAGGCAAGAGGACTAGGTTTCGGGCTCTGGTTTGCCCAGGGTCACACA
GCGTGTCAGATGGTATTAGGCCCAGAACCCCGGCCTCTGGTCACTTGTTCTTCTGCCTCC
ATGCTATCTCTATTAAGTCTGCTGCTTTATTCTTAAATTCCAGACCCTAAAAAGTCAGCC
AGTCGCCCTGGGAGTCGAGCTGGGAGTCGGGCCGGGAGTCGGGCCAGCAGCCGGCGAGGG
AGTGATGCCTCTGACTTTGACCTTTTGGAGACGCAGTCAGCTTGTTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGAAGTTTATTTGCCGAACATCCCTTGCTGGCGATACCAGCAATAGTTCTTCCCCAGC
CTCCACAGGTGCCAAAACTAACCGGGCAGGTAAGTCCCTGCTCCTGCACTTCTCCCTCAG
GATGACGGGGAGGGGACTGGCCAGGCTGGGGATTTGGCAACAGCAGCCGCTCATCTGTGC
CTGGCTACTCCCCACCGGGCAAATCGTGAGTAGCAGATTCCCTGCTGGCCTTGACTTTTG
CTCCTGTCAGCACAGCCAGCTTGAACCTTGCCTTCTGAGAGCAGATGCTCCCACAGCCAA
AGCCAGCCCCACTGTTGTTGATCAGAAATGATCATGTTTGAGAGGATGTCGAGGGAAGAA
AGGCCTCCCTCAGAAGCCCAGCCAGTGTTGAACATGGCAGTTTGCTAGTAATTTTTCCAA
CACCCTGTGTTTATTATCACTGCTGGGGAGCCAAGAAAGTCCGGGAAGGATCACAGCTTT
GCCCCTGTTGATGTTCCTTGTGGGAACCTGGGGTTTGGCCTCCATTTCCTGCTCTGTTCG
CTGTGGCTTCGCCCGGGTTCTCAGTCTCCCCACGCAGCTAGCAGGCGCTATCTTCTGTGC
CAAGGCCGTGGGGCAGCCCTGCTCGATGATGGGGGCCTGTGAGGCAGCAGTGCTGCCAAT
AGAAGCTGGTTTCTAATCCTCAGGAGGCTTCTCAGAAGCACAAAGCCAGAAAAGATTTCT
GCAACTTCTGTGTAGGCAAGAGGACTAGGTTTCGGGCTCTGGTTTGCCCAGGGTCACACA
GCGTGTCAGATGGTATTAGGCCCAGAACCCCGGCCTCTGGTCACTTGTTCTTCTGCCTCC
ATGCTATCTCTATTAAGTCTGCTGCTTTATTCTTAAATTCCAGACCCTAAAAAGTCAGCC
AGTCGCCCTGGGAGTCGAGCTGGGAGTCGGGCCGGGAGTCGGGCCAGCAGCCGGCGAGGG
AGTGATGCCTCTGACTTTGACCTTTTGGAGACGCAGTCAGCTTGTTCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               836-1008, gnl|bosTau2|chr3 (73136949-73136776)
               

               
               836-1008, gnl|Hg17|chr1 (39620257-39620427)
               

               
               836-1008, gnl|Mm7|chr4 (122795836-122795667)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               836-1008, gnl|bosTau2|chr3 (73136949-73136776)
               

               
               836-1008, gnl|Hg17|chr1 (39620257-39620427)
               

               
               836-1008, gnl|Mm7|chr4 (122795836-122795667)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	836-1008, gnl\|bosTau2\|chr3 (73136949-73136776)
	836-1008, gnl\|Hg17\|chr1 (39620257-39620427)
	836-1008, gnl\|Mm7\|chr4 (122795836-122795667)