Ss1.1-Liv1-LVRM10140C04.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAGACTTCTATGCGACCACGGAGACCAATTACATCAGGAGAATCAACCCGCTGACCCTG GAGACCCTGGAGAAGGTTGATTATCGTAAATACGTGGCTGTAAATGTGGCAACATCGCAT CCTCATTATGATGCCACTGGAAACGTTCTCAACATAGGCACATCCATCGTGGACAAGGGG AAGACGAAATACGTGATCTTTAAGATCCCGGCCACGGCACCAGAGGACGGGAAGAAGGGG CGAGGGCCCCTGAAGCACACGGAGGTGTTCTGCTCCATCGCCTCCCGCTCCCTCCTCTCC CCGAGCTACTACCACAGCTTCGGCGTCACCGAGAACTACGTCGTTTTCCTCGAGCAGCCC TTCCGGATGGATATCCTCAAGATGGCCACCGCCTACATCCGGGGCGTGAGCTGGGCCTCC TGCCTGGCCTTCCACGGGGAGGACAAGACTTACATTCACGTCATTGACCAAAGAACAAGG AAGCCCGTGCTGAGCAAGTTCTACACGGACCCCATGGTGGTGTTTCATCACGTCAACGCC TACGAAGAGGACGGCTGCCTCGTGTTTGACGTCATCGCCTACGAGGACAGCAGCCTTTAC CAGCTCTTCTACTTGGCCCACTTGAATGAGGACTTCGAGGAGAACTCCAGGCTCACCTCT GTGCCCACCCTCAAGAGGTTCGCGGTGCCCCTCCACGTGGACAAGGATGCAGACGTGGGT TCCAATTTAATCAAACTGGCGTCTACTACAGCCAGAGCCCTGAAGGAAAAAGATGACCAA ATCTACTGCCAGCCGGAGCTGCTCTGCAAAGGCTTAGAGCTGCCTCGGATCAATTATGCT TACAACGGGAAGCCATACCGCTACGTCTTTGCTGCCGAAGTCCAGTGGAGCCCCATCCCA ACCAAGGTCATAAAATATGACCTTCTCACCAAGTCGTCCTTGAGTTGGGGTGAGGCGCAC TGCTGGCCCGCGGAGCCCCTGTTCGTGCCTACGCCGGGTGCCCAGGACGAGGATGACGGA ATTATCTTATCAGCCATCGTCTCTACCGATCCCCAGAAGCTGCCGTTTCTGCTTGTTCTG GATGCCAAAACTTTTACGGAATTGGCTCGTGCTTCCGTTGACGTAGACATGCACCTGGAT CTCCACGGGCTGTTCATCCCGGGCACAGCCTGGGAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAGACTTCTATGCGACCACGGAGACCAATTACATCAGGAGAATCAACCCGCTGACCCTG GAGACCCTGGAGAAGGTTGATTATCGTAAATACGTGGCTGTAAATGTGGCAACATCGCAT CCTCATTATGATGCCACTGGAAACGTTCTCAACATAGGCACATCCATCGTGGACAAGGGG AAGACGAAATACGTGATCTTTAAGATCCCGGCCACGGCACCAGAGGACGGGAAGAAGGGG CGAGGGCCCCTGAAGCACACGGAGGTGTTCTGCTCCATCGCCTCCCGCTCCCTCCTCTCC CCGAGCTACTACCACAGCTTCGGCGTCACCGAGAACTACGTCGTTTTCCTCGAGCAGCCC TTCCGGATGGATATCCTCAAGATGGCCACCGCCTACATCCGGGGCGTGAGCTGGGCCTCC TGCCTGGCCTTCCACGGGGAGGACAAGACTTACATTCACGTCATTGACCAAAGAACAAGG AAGCCCGTGCTGAGCAAGTTCTACACGGACCCCATGGTGGTGTTTCATCACGTCAACGCC TACGAAGAGGACGGCTGCCTCGTGTTTGACGTCATCGCCTACGAGGACAGCAGCCTTTAC CAGCTCTTCTACTTGGCCCACTTGAATGAGGACTTCGAGGAGAACTCCAGGCTCACCTCT GTGCCCACCCTCAAGAGGTTCGCGGTGCCCCTCCACGTGGACAAGGATGCAGACGTGGGT TCCAATTTAATCAAACTGGCGTCTACTACAGCCAGAGCCCTGAAGGAAAAAGATGACCAA ATCTACTGCCAGCCGGAGCTGCTCTGCAAAGGCTTAGAGCTGCCTCGGATCAATTATGCT TACAACGGGAAGCCATACCGCTACGTCTTTGCTGCCGAAGTCCAGTGGAGCCCCATCCCA ACCAAGGTCATAAAATATGACCTTCTCACCAAGTCGTCCTTGAGTTGGGGTGAGGCGCAC TGCTGGCCCGCGGAGCCCCTGTTCGTGCCTACGCCGGGTGCCCAGGACGAGGATGACGGA ATTATCTTATCAGCCATCGTCTCTACCGATCCCCAGAAGCTGCCGTTTCTGCTTGTTCTG GATGCCAAAACTTTTACGGAATTGGCTCGTGCTTCCGTTGACGTAGACATGCACCTGGAT CTCCACGGGCTGTTCATCCCGGGCACAGCCTGGGAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 53 entry(ies) | More info |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
| 74-223, gnl|bosTau2|chr18 (7468545-7468396) | |
| 74-223, gnl|canFam2|chr5 (73625260-73625114) | |
| 74-223, gnl|danRer3|chrUn (108743894-108744047) | |
| 74-223, gnl|dasNov1|scaffold_131330 (783-881) | |
| 74-223, gnl|echTel1|scaffold_268982 (32841-32697) | |
| 74-223, gnl|fr1|chrUn (203793209-203793073) | |
| 74-223, gnl|galGal2|chr11 (15822749-15822601) | |
| 74-223, gnl|hg17|chr16 (79855713-79855880) | |
| 74-223, gnl|Hg17|chr16 (79855744-79855893) | |
| 74-223, gnl|loxAfr1|scaffold_4986 (79230-79379) | |
| 74-223, gnl|mm7|chr8 (115722336-115722486) | |
| 74-223, gnl|Mm7|chr8 (115722350-115722499) | |
| 74-223, gnl|monDom2|scaffold_1 (134262977-134262809) | |
| 74-223, gnl|oryCun1|scaffold_207300 (86124-86019) | |
| 74-223, gnl|panTro1|chr18 (74725434-74725601) | |
| 74-223, gnl|rheMac2|chr14 (110659724-110659833) | |
| 74-223, gnl|rn3|chr19 (47220883-47221033) | |
| 74-223, gnl|tetNig1|chrUn_random (7594836-7594972) | |
| 74-223, gnl|xenTro1|scaffold_1113 (230326-230183) | |
| 446-706, gnl|bosTau2|chr18 (7463802-7463542) | |
| 446-706, gnl|canFam2|chr5 (73619997-73619706) | |
| 446-706, gnl|danRer3|chrUn (108747522-108747784) | |
| 446-706, gnl|dasNov1|scaffold_1442 (7104-7395) | |
| 446-706, gnl|echTel1|scaffold_268982 (26948-26669) | |
| 446-706, gnl|fr1|chrUn (203792639-203792353) | |
| 446-706, gnl|galGal2|chr11 (15821413-15821130) | |
| 446-706, gnl|hg17|chr16 (79861238-79861529) | |
| 446-706, gnl|Hg17|chr16 (79861263-79861523) | |
| 446-706, gnl|mm7|chr8 (115730817-115731118) | |
| 446-706, gnl|Mm7|chr8 (115730852-115731112) | |
| 446-706, gnl|monDom2|scaffold_1 (134259894-134259603) | |
| 446-706, gnl|rn3|chr19 (47227217-47227518) | |
| 446-706, gnl|tetNig1|chrUn_random (7595656-7595933) | |
| 446-706, gnl|xenTro1|scaffold_1113 (227751-227482) | |
| 787-908, gnl|bosTau2|chr18 (7454537-7454416) | |
| 787-908, gnl|Hg17|chr16 (79876621-79876742) | |
| 787-908, gnl|Mm7|chr8 (115742650-115742769) | |
| 1018-1175, gnl|bosTau2|chr18 (7450672-7450515) | |
| 1018-1175, gnl|canFam2|chr5 (73605686-73605491) | |
| 1018-1175, gnl|danRer3|chrUn (108754211-108754388) | |
| 1018-1175, gnl|dasNov1|scaffold_1442 (20587-20783) | |
| 1018-1175, gnl|echTel1|scaffold_268982 (8218-8035) | |
| 1018-1175, gnl|fr1|chrUn (203790731-203790571) | |
| 1018-1175, gnl|galGal2|chr11 (15815917-15815710) | |
| 1018-1175, gnl|hg17|chr16 (79881426-79881622) | |
| 1018-1175, gnl|Hg17|chr16 (79881453-79881610) | |
| 1018-1175, gnl|loxAfr1|scaffold_61549 (12201-12018) | |
| 1018-1175, gnl|mm7|chr8 (115746445-115746640) | |
| 1018-1175, gnl|Mm7|chr8 (115746471-115746628) | |
| 1018-1175, gnl|oryCun1|scaffold_199657 (41019-41214) | |
| 1018-1175, gnl|panTro1|chr18 (74751153-74751348) | |
| 1018-1175, gnl|rn3|chr19 (47243680-47243869) | |
| 1018-1175, gnl|tetNig1|chrUn_random (7597657-7597825) |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 74-223, gnl|bosTau2|chr18 (7468545-7468396) | |
| 74-223, gnl|canFam2|chr5 (73625260-73625114) | |
| 74-223, gnl|danRer3|chrUn (108743894-108744047) | |
| 74-223, gnl|dasNov1|scaffold_131330 (783-881) | |
| 74-223, gnl|echTel1|scaffold_268982 (32841-32697) | |
| 74-223, gnl|fr1|chrUn (203793209-203793073) | |
| 74-223, gnl|galGal2|chr11 (15822749-15822601) | |
| 74-223, gnl|hg17|chr16 (79855713-79855880) | |
| 74-223, gnl|Hg17|chr16 (79855744-79855893) | |
| 74-223, gnl|loxAfr1|scaffold_4986 (79230-79379) | |
| 74-223, gnl|mm7|chr8 (115722336-115722486) | |
| 74-223, gnl|Mm7|chr8 (115722350-115722499) | |
| 74-223, gnl|monDom2|scaffold_1 (134262977-134262809) | |
| 74-223, gnl|oryCun1|scaffold_207300 (86124-86019) | |
| 74-223, gnl|panTro1|chr18 (74725434-74725601) | |
| 74-223, gnl|rheMac2|chr14 (110659724-110659833) | |
| 74-223, gnl|rn3|chr19 (47220883-47221033) | |
| 74-223, gnl|tetNig1|chrUn_random (7594836-7594972) | |
| 74-223, gnl|xenTro1|scaffold_1113 (230326-230183) | |
| 446-706, gnl|bosTau2|chr18 (7463802-7463542) | |
| 446-706, gnl|canFam2|chr5 (73619997-73619706) | |
| 446-706, gnl|danRer3|chrUn (108747522-108747784) | |
| 446-706, gnl|dasNov1|scaffold_1442 (7104-7395) | |
| 446-706, gnl|echTel1|scaffold_268982 (26948-26669) | |
| 446-706, gnl|fr1|chrUn (203792639-203792353) | |
| 446-706, gnl|galGal2|chr11 (15821413-15821130) | |
| 446-706, gnl|hg17|chr16 (79861238-79861529) | |
| 446-706, gnl|Hg17|chr16 (79861263-79861523) | |
| 446-706, gnl|mm7|chr8 (115730817-115731118) | |
| 446-706, gnl|Mm7|chr8 (115730852-115731112) | |
| 446-706, gnl|monDom2|scaffold_1 (134259894-134259603) | |
| 446-706, gnl|rn3|chr19 (47227217-47227518) | |
| 446-706, gnl|tetNig1|chrUn_random (7595656-7595933) | |
| 446-706, gnl|xenTro1|scaffold_1113 (227751-227482) | |
| 787-908, gnl|bosTau2|chr18 (7454537-7454416) | |
| 787-908, gnl|Hg17|chr16 (79876621-79876742) | |
| 787-908, gnl|Mm7|chr8 (115742650-115742769) | |
| 1018-1175, gnl|bosTau2|chr18 (7450672-7450515) | |
| 1018-1175, gnl|canFam2|chr5 (73605686-73605491) | |
| 1018-1175, gnl|danRer3|chrUn (108754211-108754388) | |
| 1018-1175, gnl|dasNov1|scaffold_1442 (20587-20783) | |
| 1018-1175, gnl|echTel1|scaffold_268982 (8218-8035) | |
| 1018-1175, gnl|fr1|chrUn (203790731-203790571) | |
| 1018-1175, gnl|galGal2|chr11 (15815917-15815710) | |
| 1018-1175, gnl|hg17|chr16 (79881426-79881622) | |
| 1018-1175, gnl|Hg17|chr16 (79881453-79881610) | |
| 1018-1175, gnl|loxAfr1|scaffold_61549 (12201-12018) | |
| 1018-1175, gnl|mm7|chr8 (115746445-115746640) | |
| 1018-1175, gnl|Mm7|chr8 (115746471-115746628) | |
| 1018-1175, gnl|oryCun1|scaffold_199657 (41019-41214) | |
| 1018-1175, gnl|panTro1|chr18 (74751153-74751348) | |
| 1018-1175, gnl|rn3|chr19 (47243680-47243869) | |
| 1018-1175, gnl|tetNig1|chrUn_random (7597657-7597825) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jej (0.296765) |