Ss1.1-Liv1-LVRM10141H07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGGCGGAGGCCGCGGACTGAAAACACTAGGCCTAGCGAGGGGTGGGAGAGAAAACGCGC TTCTTAGCCCTGGCGGCCAGTCGGTGCCCCCAGCCCTGTGCTGGCAGATAGCGTGGGTGT GGCCCTTATCCACTTCCCCGCGGAGCCGGCTGGGTGATGTCTTGAGACCTCTACCTCCTC CTCCCCTCATTTTTCTTGTCCCTCTCGTGGGCTTCCCCATGGGCCGGACCGTGGTCGTGC TGGGTGGAGGCATCAGCGGCCTGGCCGCCAGTTACCATCTGAGCCGGGCCCCTTGTCCCC CCAAGGTGGTCTTGGTGGAGGGCAGCGAGCGCCTAGGCGGCTGGATCCGCTCAATACGAG GGCCAGATGGTGCTGTTTTTGAACTTGGACCTCGAGGAATTCGGCCTGCTGGAGCCCTGG GAGCCCGGACCCTGCTCATGGTTTCTGAGCTTGGTTTGGACTCAGAAGTGTTACCTGTCC GGGGAGACCATCCAGCTTCCAAGAACAGGTTCCTGTATGTAGATGGTGCCCTGCATCCCC TGCCCTCTGGCTTCAGGGGGCTATTCTGCCGTTCACCTCCCTTCTCCAAACCTCTGTTTT GGGCTGGGCTGAGGGAGTTGACCACGCCTCGGGGCAAAGACCCTGATGAGAGTGTGCACA GTTTTGCCCAGCGTCGCCTTGGTCCTGAGGTGGCGTCTCTAGCCATGGACAGTCTCTGCC GTGGAGTGTTTGCAGGCAACAGTCGTGAGCTCAGCATCAGGTCCTGCTTTCCCAGCCTCT TCCAGGCTGAACAAACCCATCGTTCCGTATTACTGGGGCTGCTGATGGGGGCAGGACGGA GTCCACAGCCAGACTCAGCACTTATTCGCCAGGCTCGGGCTGAACGCTGGAGCCAGTGGT CACTCCGTGGAGGACTGGAGACATTGCCCCAAGCCCTTAATGCCCACCTGACTAGTAGGG GTGTCAGTGTTCTCAGAGGCCAGCCAGTCTCTGGGCTCAGCCTCCAGGCAGAAGGGTGCT GGAAGGTGTCTCTAGGGGACAGCAGCCTGGAGGCTGACCACATTATTAGTGCTGTTCCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGGCGGAGGCCGCGGACTGAAAACACTAGGCCTAGCGAGGGGTGGGAGAGAAAACGCGC TTCTTAGCCCTGGCGGCCAGTCGGTGCCCCCAGCCCTGTGCTGGCAGATAGCGTGGGTGT GGCCCTTATCCACTTCCCCGCGGAGCCGGCTGGGTGATGTCTTGAGACCTCTACCTCCTC CTCCCCTCATTTTTCTTGTCCCTCTCGTGGGCTTCCCCATGGGCCGGACCGTGGTCGTGC TGGGTGGAGGCATCAGCGGCCTGGCCGCCAGTTACCATCTGAGCCGGGCCCCTTGTCCCC CCAAGGTGGTCTTGGTGGAGGGCAGCGAGCGCCTAGGCGGCTGGATCCGCTCAATACGAG GGCCAGATGGTGCTGTTTTTGAACTTGGACCTCGAGGAATTCGGCCTGCTGGAGCCCTGG GAGCCCGGACCCTGCTCATGGTTTCTGAGCTTGGTTTGGACTCAGAAGTGTTACCTGTCC GGGGAGACCATCCAGCTTCCAAGAACAGGTTCCTGTATGTAGATGGTGCCCTGCATCCCC TGCCCTCTGGCTTCAGGGGGCTATTCTGCCGTTCACCTCCCTTCTCCAAACCTCTGTTTT GGGCTGGGCTGAGGGAGTTGACCACGCCTCGGGGCAAAGACCCTGATGAGAGTGTGCACA GTTTTGCCCAGCGTCGCCTTGGTCCTGAGGTGGCGTCTCTAGCCATGGACAGTCTCTGCC GTGGAGTGTTTGCAGGCAACAGTCGTGAGCTCAGCATCAGGTCCTGCTTTCCCAGCCTCT TCCAGGCTGAACAAACCCATCGTTCCGTATTACTGGGGCTGCTGATGGGGGCAGGACGGA GTCCACAGCCAGACTCAGCACTTATTCGCCAGGCTCGGGCTGAACGCTGGAGCCAGTGGT CACTCCGTGGAGGACTGGAGACATTGCCCCAAGCCCTTAATGCCCACCTGACTAGTAGGG GTGTCAGTGTTCTCAGAGGCCAGCCAGTCTCTGGGCTCAGCCTCCAGGCAGAAGGGTGCT GGAAGGTGTCTCTAGGGGACAGCAGCCTGGAGGCTGACCACATTATTAGTGCTGTTCCAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 1-211, gnl|bosTau2|chr3 (7626530-7626311) | |
| 1-211, gnl|Hg17|chr1 (157949320-157949536) | |
| 1-211, gnl|Mm7|chr1 (171251239-171251046) | |
| 290-442, gnl|bosTau2|chr3 (7625916-7625765) | |
| 290-442, gnl|canFam2|chr38 (24309993-24309829) | |
| 290-442, gnl|danRer3|chrNA (226498429-226498293) | |
| 290-442, gnl|dasNov1|scaffold_16381 (13666-13829) | |
| 290-442, gnl|echTel1|scaffold_311345 (103390-103231) | |
| 290-442, gnl|fr1|chrUn (96489301-96489495) | |
| 290-442, gnl|hg17|chr1 (157949942-157950106) | |
| 290-442, gnl|Hg17|chr1 (157949948-157950099) | |
| 290-442, gnl|mm7|chr1 (171250637-171250474) | |
| 290-442, gnl|Mm7|chr1 (171250630-171250479) | |
| 290-442, gnl|monDom2|scaffold_0 (28657715-28657529) | |
| 290-442, gnl|panTro1|chr1 (140017529-140017693) | |
| 290-442, gnl|rheMac2|chr1 (139775942-139776106) | |
| 290-442, gnl|rn3|chr13 (87362995-87362832) | |
| 290-442, gnl|tetNig1|chrUn_random (32225295-32225159) | |
| 554-691, gnl|bosTau2|chr3 (7625336-7625199) | |
| 554-691, gnl|canFam2|chr38 (24309476-24309290) | |
| 554-691, gnl|danRer3|chrNA (226495220-226495029) | |
| 554-691, gnl|dasNov1|scaffold_16381 (14207-14406) | |
| 554-691, gnl|echTel1|scaffold_311345 (102867-102680) | |
| 554-691, gnl|hg17|chr1 (157950826-157951026) | |
| 554-691, gnl|Hg17|chr1 (157950855-157950992) | |
| 554-691, gnl|mm7|chr1 (171250129-171249925) | |
| 554-691, gnl|Mm7|chr1 (171250097-171249960) | |
| 554-691, gnl|monDom2|scaffold_0 (28657002-28656814) | |
| 554-691, gnl|panTro1|chr1 (140018416-140018616) | |
| 554-691, gnl|rheMac2|chr1 (139776813-139777013) | |
| 554-691, gnl|rn3|chr13 (87362468-87362266) | |
| 831-1027, gnl|bosTau2|chr3 (7624647-7624451) | |
| 831-1027, gnl|Hg17|chr1 (157951638-157952048) | |
| 831-1027, gnl|Mm7|chr1 (171249410-171249214) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-211, gnl|bosTau2|chr3 (7626530-7626311) | |
| 1-211, gnl|Hg17|chr1 (157949320-157949536) | |
| 1-211, gnl|Mm7|chr1 (171251239-171251046) | |
| 290-442, gnl|bosTau2|chr3 (7625916-7625765) | |
| 290-442, gnl|canFam2|chr38 (24309993-24309829) | |
| 290-442, gnl|danRer3|chrNA (226498429-226498293) | |
| 290-442, gnl|dasNov1|scaffold_16381 (13666-13829) | |
| 290-442, gnl|echTel1|scaffold_311345 (103390-103231) | |
| 290-442, gnl|fr1|chrUn (96489301-96489495) | |
| 290-442, gnl|hg17|chr1 (157949942-157950106) | |
| 290-442, gnl|Hg17|chr1 (157949948-157950099) | |
| 290-442, gnl|mm7|chr1 (171250637-171250474) | |
| 290-442, gnl|Mm7|chr1 (171250630-171250479) | |
| 290-442, gnl|monDom2|scaffold_0 (28657715-28657529) | |
| 290-442, gnl|panTro1|chr1 (140017529-140017693) | |
| 290-442, gnl|rheMac2|chr1 (139775942-139776106) | |
| 290-442, gnl|rn3|chr13 (87362995-87362832) | |
| 290-442, gnl|tetNig1|chrUn_random (32225295-32225159) | |
| 554-691, gnl|bosTau2|chr3 (7625336-7625199) | |
| 554-691, gnl|canFam2|chr38 (24309476-24309290) | |
| 554-691, gnl|danRer3|chrNA (226495220-226495029) | |
| 554-691, gnl|dasNov1|scaffold_16381 (14207-14406) | |
| 554-691, gnl|echTel1|scaffold_311345 (102867-102680) | |
| 554-691, gnl|hg17|chr1 (157950826-157951026) | |
| 554-691, gnl|Hg17|chr1 (157950855-157950992) | |
| 554-691, gnl|mm7|chr1 (171250129-171249925) | |
| 554-691, gnl|Mm7|chr1 (171250097-171249960) | |
| 554-691, gnl|monDom2|scaffold_0 (28657002-28656814) | |
| 554-691, gnl|panTro1|chr1 (140018416-140018616) | |
| 554-691, gnl|rheMac2|chr1 (139776813-139777013) | |
| 554-691, gnl|rn3|chr13 (87362468-87362266) | |
| 831-1027, gnl|bosTau2|chr3 (7624647-7624451) | |
| 831-1027, gnl|Hg17|chr1 (157951638-157952048) | |
| 831-1027, gnl|Mm7|chr1 (171249410-171249214) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (0.132802) |