Ss1.1-Liv1-LVRM10142C12.5
|
GGCCGCCCGCCGGAGCGGCTGCCTGCCGAAGACTGCCCCTCCTAGGGTCCGTGGGCCCCC
TCTCTGGATCCCAGCTGCACGAGCCCCTCGCCCCAGCACCGGAGGTGGGGAAGAGGCCTG
CGCCAGAAGGTTCTCGGCAAAAGCTGGGAAGATGTAGAATTAGTCCTCCCGATTGGAGGC
GCTGCCCTCCGCCCTCACCTGCGGCTTAGGCCCCGCCTGCCCGCTGCGTCCCCAGGTCCT
TCCCTCGCTTGGATGCTCCTCCCAGAACCCCCTCTGATTCAGTCGCTCTGCCCACAGCTT
GTCTCCAGCCCGGCTGTTCACCCTCCAGAACTCTGTGCTCCGGGGCTGCCTGGCAGCTGG
GAGTCTCCTTAGAGTCTGGGCTCTTCTGGCAGAGGCTGAGGCTCACCAGTGTCTTCTGGC
CCCTCCATGAGTGAGGCAAACGGAACCCTTGTGGGGCCCTCGGAGCTCCCCACAACATCA
GCGGTGGCCCCTGGACCGGGCGGCGGGGCCCGGGCGTGGCCTGTGCTGGTAGGGGTTGTG
TTGGGAGCCGTGGTCCTCTCTCTGCTCATTGCACTTGCTGCCAAATGCCACCTCTGCCGC
AAATACCGCGCCAGCTACCAGCACCGCCCGCTGTCTGGGACGGGCAAGGGGAACCGCCCC
CAGGTGGGTGAAGAGGAGGATGATGGCTTCATCGAGGACAATTACATTCAGCCCGGGGCT
GGCGGGCTGGGGCTGGAGGGAAGCAGGGATCACTTCTCCCTCTGAGCCCTGTCGTTGGCC
CTGCCCACCCCCACCCCGAAGCCTGAGAGCTTAAGGCTGGCAGATACTCCTCGGTGGGAC
CACAAGTCTCAGGGATTGGTGGCCAGGGCTTCAGGGCTGACCGGGAGGAGAGCAGTGTCC
CTTCCTTGATGCTAGGCACCAAAGTGAACCACGCATGACCATCCCTTGCTCAGTAGCCCT
CAATGGCTCCCTGCCGCCCTCAGGATACTGCCCACCAAGGGCCTGACCGTGAAATCAGGT
CTCTGCCAGCCCTTGGTTTCCTTTGTCACTGGTCCCTGACTTCCTCCCTACTGAGCCAAT
TCCTTCGGATTCCTCCCCCTCCTACGCTGCTGTTTCTTTTGCTCCTCTGCCTCTCTGCCC
TCTTGTTCTCCCTAACATAGAGGATGCGCTCATCCTCTGTAACAGTGATGAAAATCCCTG
GCCAGTCGACCCTGTGTGGCCTGCCCACCTGCCAGCATTTCAGATGCGCTCAGACGGTCC
CATTTCAGCAGATGAAAACCAGGGTGCCAAGTTTCTTACTGAGATTGTTTTCCCATCAAT
AAAGTGGGTAATCGAAATGGTTATAATATATTCTGTTTCCACAGGTATTAATAAATTTAT
TTTCACTTTAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGCCGCCCGCCGGAGCGGCTGCCTGCCGAAGACTGCCCCTCCTAGGGTCCGTGGGCCCCC
TCTCTGGATCCCAGCTGCACGAGCCCCTCGCCCCAGCACCGGAGGTGGGGAAGAGGCCTG
CGCCAGAAGGTTCTCGGCAAAAGCTGGGAAGATGTAGAATTAGTCCTCCCGATTGGAGGC
GCTGCCCTCCGCCCTCACCTGCGGCTTAGGCCCCGCCTGCCCGCTGCGTCCCCAGGTCCT
TCCCTCGCTTGGATGCTCCTCCCAGAACCCCCTCTGATTCAGTCGCTCTGCCCACAGCTT
GTCTCCAGCCCGGCTGTTCACCCTCCAGAACTCTGTGCTCCGGGGCTGCCTGGCAGCTGG
GAGTCTCCTTAGAGTCTGGGCTCTTCTGGCAGAGGCTGAGGCTCACCAGTGTCTTCTGGC
CCCTCCATGAGTGAGGCAAACGGAACCCTTGTGGGGCCCTCGGAGCTCCCCACAACATCA
GCGGTGGCCCCTGGACCGGGCGGCGGGGCCCGGGCGTGGCCTGTGCTGGTAGGGGTTGTG
TTGGGAGCCGTGGTCCTCTCTCTGCTCATTGCACTTGCTGCCAAATGCCACCTCTGCCGC
AAATACCGCGCCAGCTACCAGCACCGCCCGCTGTCTGGGACGGGCAAGGGGAACCGCCCC
CAGGTGGGTGAAGAGGAGGATGATGGCTTCATCGAGGACAATTACATTCAGCCCGGGGCT
GGCGGGCTGGGGCTGGAGGGAAGCAGGGATCACTTCTCCCTCTGAGCCCTGTCGTTGGCC
CTGCCCACCCCCACCCCGAAGCCTGAGAGCTTAAGGCTGGCAGATACTCCTCGGTGGGAC
CACAAGTCTCAGGGATTGGTGGCCAGGGCTTCAGGGCTGACCGGGAGGAGAGCAGTGTCC
CTTCCTTGATGCTAGGCACCAAAGTGAACCACGCATGACCATCCCTTGCTCAGTAGCCCT
CAATGGCTCCCTGCCGCCCTCAGGATACTGCCCACCAAGGGCCTGACCGTGAAATCAGGT
CTCTGCCAGCCCTTGGTTTCCTTTGTCACTGGTCCCTGACTTCCTCCCTACTGAGCCAAT
TCCTTCGGATTCCTCCCCCTCCTACGCTGCTGTTTCTTTTGCTCCTCTGCCTCTCTGCCC
TCTTGTTCTCCCTAACATAGAGGATGCGCTCATCCTCTGTAACAGTGATGAAAATCCCTG
GCCAGTCGACCCTGTGTGGCCTGCCCACCTGCCAGCATTTCAGATGCGCTCAGACGGTCC
CATTTCAGCAGATGAAAACCAGGGTGCCAAGTTTCTTACTGAGATTGTTTTCCCATCAAT
AAAGTGGGTAATCGAAATGGTTATAATATATTCTGTTTCCACAGGTATTAATAAATTTAT
TTTCACTTTAAA
|
|
57-237, gnl|bosTau2|chr3 (67678258-67678440) |
|
57-237, gnl|canFam2|chr15 (19892746-19892390) |
|
57-237, gnl|dasNov1|scaffold_41568 (10197-9871) |
|
57-237, gnl|echTel1|scaffold_310577 (75274-74973) |
|
57-237, gnl|hg17|chr1 (43420316-43420639) |
|
57-237, gnl|Hg17|chr1 (43420610-43420408) |
|
57-237, gnl|mm7|chr4 (117903779-117903464) |
|
57-237, gnl|Mm7|chr4 (117903491-117903685) |
|
57-237, gnl|panTro1|chr1 (44398952-44399275) |
|
57-237, gnl|rheMac2|chr1 (46197849-46198172) |
|
57-237, gnl|rn3|chr5 (139000135-138999814) |
| |
|
324-441, gnl|bosTau2|chr3 (67680715-67680829) |
|
324-441, gnl|Hg17|chr1 (43418137-43418020) |
|
324-441, gnl|Mm7|chr4 (117905633-117905746) |
| |
|
446-1391, gnl|bosTau2|chr3 (67680973-67681914) |
|
446-1391, gnl|Hg17|chr1 (43417871-43416654) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
57-237, gnl|bosTau2|chr3 (67678258-67678440) |
|
57-237, gnl|canFam2|chr15 (19892746-19892390) |
|
57-237, gnl|dasNov1|scaffold_41568 (10197-9871) |
|
57-237, gnl|echTel1|scaffold_310577 (75274-74973) |
|
57-237, gnl|hg17|chr1 (43420316-43420639) |
|
57-237, gnl|Hg17|chr1 (43420610-43420408) |
|
57-237, gnl|mm7|chr4 (117903779-117903464) |
|
57-237, gnl|Mm7|chr4 (117903491-117903685) |
|
57-237, gnl|panTro1|chr1 (44398952-44399275) |
|
57-237, gnl|rheMac2|chr1 (46197849-46198172) |
|
57-237, gnl|rn3|chr5 (139000135-138999814) |
| |
|
324-441, gnl|bosTau2|chr3 (67680715-67680829) |
|
324-441, gnl|Hg17|chr1 (43418137-43418020) |
|
324-441, gnl|Mm7|chr4 (117905633-117905746) |
| |
|
446-1391, gnl|bosTau2|chr3 (67680973-67681914) |
|
446-1391, gnl|Hg17|chr1 (43417871-43416654) |
|
col (0.390016) |
|
ill (0.351185) |
|
duo (0.345602) |
|
mcp (0.170648) |
|
nje (0.16592) |
|
nco (0.161734) |
|
clu (0.119646) |
|
col (0.390016) |
|
ill (0.351185) |
|
duo (0.345602) |
|
mcp (0.170648) |
|
nje (0.16592) |
|
nco (0.161734) |
|
clu (0.119646) |
