Non-Coding RNA Search

Ss1.1-Liv1-LVRM1A120183.5

Sequence:


               
               GGGCGGGTAGTTCCTGGGCACGATGGCTTCGCCATTCGTGGCTCCGGTCACGCGGCAAGT
CAGCGGTCGCGCCGCTCCAGCCTCAATTCCAAGCGGCCCCGAGAGTGGGCAGCCCCTGGC
CGCCACCGTGGCCGAGATGCCCGTGCTGGACGCCTCCGGGAGGCGGGTGCTGTTCGGCTC
GCTGTTCCGAGAGCGACGGGCTGTCGTGGTCTTTGTGCGGCATTTCCTGTGTTACATCTG
CAAGGAATACGTAGAAGATCTGGCCAAAATCCCCAAGAGTTTCTTACAAGAAGCAAACGT
CACTCTTATAGTGATTGGACAGTCATCCTACCATCATATTGAGCCTTTCTGCAAACTAAC
TGGGTATTCTCACGAAATCTATGTTGATCCTGAGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGCGGGTAGTTCCTGGGCACGATGGCTTCGCCATTCGTGGCTCCGGTCACGCGGCAAGT
CAGCGGTCGCGCCGCTCCAGCCTCAATTCCAAGCGGCCCCGAGAGTGGGCAGCCCCTGGC
CGCCACCGTGGCCGAGATGCCCGTGCTGGACGCCTCCGGGAGGCGGGTGCTGTTCGGCTC
GCTGTTCCGAGAGCGACGGGCTGTCGTGGTCTTTGTGCGGCATTTCCTGTGTTACATCTG
CAAGGAATACGTAGAAGATCTGGCCAAAATCCCCAAGAGTTTCTTACAAGAAGCAAACGT
CACTCTTATAGTGATTGGACAGTCATCCTACCATCATATTGAGCCTTTCTGCAAACTAAC
TGGGTATTCTCACGAAATCTATGTTGATCCTGAGAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|34873556|ref|XP_341478.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34873556|ref|XP_341478.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               16-220, gnl|bosTau2|chr8 (45236063-45236267)
               

               
               16-220, gnl|Hg17|chr9 (96497125-96496927)
               

               
               16-220, gnl|Mm7|chr13 (62140285-62140083)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-220, gnl|bosTau2|chr8 (45236063-45236267)
               

               
               16-220, gnl|Hg17|chr9 (96497125-96496927)
               

               
               16-220, gnl|Mm7|chr13 (62140285-62140083)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fty (0.17584)
               

               
               cag (0.151194)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               cag (0.151194)

	16-220, gnl\|bosTau2\|chr8 (45236063-45236267)
	16-220, gnl\|Hg17\|chr9 (96497125-96496927)
	16-220, gnl\|Mm7\|chr13 (62140285-62140083)