Non-Coding RNA Search

Ss1.1-Liv1-LVRM1C030206.5

Sequence:


               
               ATAGTTTGATGATAATGAGTTCATATTCCTAAACTTCAGCATTCGTTCTGAAACAAGTCA
CTTCAAAGCAATGCACGAATTTCACACTTTCCCAATTTCCGTAAAGTATTTCTCCATGTG
AACATTTTCTAACATATTTGCTGATGTTTTGTATCTCCAAGTTCCCACCACATAGAACAC
CAAATTCTTTCCCACTTCTGATGCTCTTTAAACATGAAAACCCTCATCATTCTGCCCAAG
CCAGAGTTTGACACTTTTCTGTCCTTTTCTTCCTCACATTTCCTAAAACAGTGATTCACC
TGTTGTTCGTGTTCCTGCAGTATCTTGCTCTTCCACAAGATCTTCTGTCCTGGTCTTTAT
TACATCAGTGCCAATGACTTATTCATTTAGGTCCCAGTTATTGATTTCCCACATGGGTGA
CTGTAGCACGGTCTCTGCTAACTTCTTGTCTGTGCCCAGGTATATTCGTGAATTTTCCAA
CAGCCAGGAACAAAGTGCATGCAGTTGTTAGTCCTCAGTGATATTTAGTCTGAGCTCAGT
CTGGTTATGTGATGATGCTATGATACTCAAGGTGGAGCTGCTCTTGGGAATGGCAGCCTC
CTGGAGTCTTCTTCTAGACTTAAAGCCTAGGGAAGTTCAACCTGGCCCATCATCCGTGGG
GTCATTCTAGCCGCATGTCAGCCTCCTCTTCCATGACTCAGTAACTCCTGTCCTCCTCCA
CCCAGTGTCTGCCCTCACTGATCACACTAGAAGTTCTCATGTCTTGTCCAGGGGGACTTT
CAATCCTCAGTTCATTATCCATTCCCAAGTGACTCATCCTGAATGACTCGGTGCCCCTGC
CTTCTCTAGCATCTCCCTGGTGATTCCTTCATTTGCCTCCCGGAATTATTTTTGAAAACT
CTTTCTGGGAAGTTTTAAGATATTTGACCCAAATAACAACAACATCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAGTTTGATGATAATGAGTTCATATTCCTAAACTTCAGCATTCGTTCTGAAACAAGTCA
CTTCAAAGCAATGCACGAATTTCACACTTTCCCAATTTCCGTAAAGTATTTCTCCATGTG
AACATTTTCTAACATATTTGCTGATGTTTTGTATCTCCAAGTTCCCACCACATAGAACAC
CAAATTCTTTCCCACTTCTGATGCTCTTTAAACATGAAAACCCTCATCATTCTGCCCAAG
CCAGAGTTTGACACTTTTCTGTCCTTTTCTTCCTCACATTTCCTAAAACAGTGATTCACC
TGTTGTTCGTGTTCCTGCAGTATCTTGCTCTTCCACAAGATCTTCTGTCCTGGTCTTTAT
TACATCAGTGCCAATGACTTATTCATTTAGGTCCCAGTTATTGATTTCCCACATGGGTGA
CTGTAGCACGGTCTCTGCTAACTTCTTGTCTGTGCCCAGGTATATTCGTGAATTTTCCAA
CAGCCAGGAACAAAGTGCATGCAGTTGTTAGTCCTCAGTGATATTTAGTCTGAGCTCAGT
CTGGTTATGTGATGATGCTATGATACTCAAGGTGGAGCTGCTCTTGGGAATGGCAGCCTC
CTGGAGTCTTCTTCTAGACTTAAAGCCTAGGGAAGTTCAACCTGGCCCATCATCCGTGGG
GTCATTCTAGCCGCATGTCAGCCTCCTCTTCCATGACTCAGTAACTCCTGTCCTCCTCCA
CCCAGTGTCTGCCCTCACTGATCACACTAGAAGTTCTCATGTCTTGTCCAGGGGGACTTT
CAATCCTCAGTTCATTATCCATTCCCAAGTGACTCATCCTGAATGACTCGGTGCCCCTGC
CTTCTCTAGCATCTCCCTGGTGATTCCTTCATTTGCCTCCCGGAATTATTTTTGAAAACT
CTTTCTGGGAAGTTTTAAGATATTTGACCCAAATAACAACAACATCTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               5-944, gnl|bosTau2|chr7 (19765354-19766276)
               

               
               5-944, gnl|Hg17|chr5 (129478898-129479773)
               

               
               5-944, gnl|Mm7|chr18 (59735817-59736594)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-944, gnl|bosTau2|chr7 (19765354-19766276)
               

               
               5-944, gnl|Hg17|chr5 (129478898-129479773)
               

               
               5-944, gnl|Mm7|chr18 (59735817-59736594)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ski (0.146735)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.146735)

	5-944, gnl\|bosTau2\|chr7 (19765354-19766276)
	5-944, gnl\|Hg17\|chr5 (129478898-129479773)
	5-944, gnl\|Mm7\|chr18 (59735817-59736594)