Ss1.1-Liv1-LVRM1D010180.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTTTTGCCCTAAACCGGGCTTTGGACTACATTTCCCAGATGGCTTTGCTTCCCGGCCTG TGCTACTTTATCAGGGCGTGTCTTGGAAGAGAAGCCCAATCCCCTAGCTACGCTGGGACC TCTCGCTGCGCTTCAGCAGCCGCAGCTGCCTCTAGGCAAGATGATTGGGGTCCTGCTCCT GCTCCTTCTTCTCCCTTTGCTCCTGTACATCGCTGTACCCCAAATCAGGAAAATGCTGTC CAGCGGGGTGTGTACATCAACCGTCCAGCTTCCTGGGAAGGTCGCTGTGGTCACTGGAGC CAACACAGGCATTGGGAAGGAGACGGCCAAAGAGCTGGCTAAAAGAGGAGCCCGTGTATA TTTAGCCTGCCGGGATGTGCAAAAGGGGGAATCGGTGGCCAGAGAAATCCAGAACATGAC AGGAAACCAACAGGTATTGGTGCGGAAACTGGACCTGGCTGATACTAAATCTATTCGAGC TTTTGCTAAGGGCTTCTTAGCAGAAGAAAAGCATCTCCACATTTTGATCAACAATGCAGG AGTGATGATGTGTCCTTACTCCAAGACAGCAGACGGCTTTGAGACGCACATGGGAGTCAA CCACTTAGGTCACTTCCTCCTGACCCATCTGTTACTAGAGAAGCTGAAGGAATCAGCCCC ATCAAGGGTAGTGAATGTGTCTTCCTTAGCACATCACATGGGAAGGATCCACTTCCATAA CCTGCAGGGTGAGAAGTTCTACCATGCGGGTCTGGCCTACTGTAACAGCAAGTTAGCCAA CGTTCTCTTCACCCAGGAACTGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTTTTGCCCTAAACCGGGCTTTGGACTACATTTCCCAGATGGCTTTGCTTCCCGGCCTG TGCTACTTTATCAGGGCGTGTCTTGGAAGAGAAGCCCAATCCCCTAGCTACGCTGGGACC TCTCGCTGCGCTTCAGCAGCCGCAGCTGCCTCTAGGCAAGATGATTGGGGTCCTGCTCCT GCTCCTTCTTCTCCCTTTGCTCCTGTACATCGCTGTACCCCAAATCAGGAAAATGCTGTC CAGCGGGGTGTGTACATCAACCGTCCAGCTTCCTGGGAAGGTCGCTGTGGTCACTGGAGC CAACACAGGCATTGGGAAGGAGACGGCCAAAGAGCTGGCTAAAAGAGGAGCCCGTGTATA TTTAGCCTGCCGGGATGTGCAAAAGGGGGAATCGGTGGCCAGAGAAATCCAGAACATGAC AGGAAACCAACAGGTATTGGTGCGGAAACTGGACCTGGCTGATACTAAATCTATTCGAGC TTTTGCTAAGGGCTTCTTAGCAGAAGAAAAGCATCTCCACATTTTGATCAACAATGCAGG AGTGATGATGTGTCCTTACTCCAAGACAGCAGACGGCTTTGAGACGCACATGGGAGTCAA CCACTTAGGTCACTTCCTCCTGACCCATCTGTTACTAGAGAAGCTGAAGGAATCAGCCCC ATCAAGGGTAGTGAATGTGTCTTCCTTAGCACATCACATGGGAAGGATCCACTTCCATAA CCTGCAGGGTGAGAAGTTCTACCATGCGGGTCTGGCCTACTGTAACAGCAAGTTAGCCAA CGTTCTCTTCACCCAGGAACTGGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 15-229, gnl|bosTau2|chr10 (53677627-53677411) | |
| 15-229, gnl|Hg17|chr14 (67232312-67232099) | |
| 15-229, gnl|Mm7|chr12 (77150407-77150202) | |
| 346-503, gnl|bosTau2|chr10 (53673782-53673625) | |
| 346-503, gnl|canFam2|chr8 (44701423-44701541) | |
| 346-503, gnl|danRer3|chr13 (34666099-34666207) | |
| 346-503, gnl|dasNov1|scaffold_74394 (8650-8768) | |
| 346-503, gnl|echTel1|scaffold_308673 (10669-10787) | |
| 346-503, gnl|fr1|chrUn (278832495-278832611) | |
| 346-503, gnl|galGal2|chr5 (25796120-25796002) | |
| 346-503, gnl|hg17|chr14 (67228904-67229022) | |
| 346-503, gnl|Hg17|chr14 (67229065-67228908) | |
| 346-503, gnl|loxAfr1|scaffold_4201 (761-879) | |
| 346-503, gnl|mm7|chr12 (77146954-77147072) | |
| 346-503, gnl|Mm7|chr12 (77147115-77146958) | |
| 346-503, gnl|monDom2|scaffold_8 (83078773-83078891) | |
| 346-503, gnl|oryCun1|scaffold_214380 (17422-17540) | |
| 346-503, gnl|panTro1|chr15 (66849638-66849756) | |
| 346-503, gnl|rheMac2|chr7 (130811313-130811431) | |
| 346-503, gnl|rn3|chr6 (101962731-101962849) | |
| 346-503, gnl|tetNig1|chr10 (11566592-11566708) | |
| 606-804, gnl|bosTau2|chr10 (53671229-53671031) | |
| 606-804, gnl|canFam2|chr8 (44698807-44699040) | |
| 606-804, gnl|danRer3|chr13 (34663186-34663418) | |
| 606-804, gnl|dasNov1|scaffold_74394 (4482-4715) | |
| 606-804, gnl|echTel1|scaffold_308673 (32180-31940) | |
| 606-804, gnl|fr1|chrUn (278832005-278832244) | |
| 606-804, gnl|galGal2|chr5 (25797240-25797003) | |
| 606-804, gnl|hg17|chr14 (67226680-67226914) | |
| 606-804, gnl|Hg17|chr14 (67226894-67226696) | |
| 606-804, gnl|loxAfr1|scaffold_33270 (14515-14752) | |
| 606-804, gnl|mm7|chr12 (77143599-77143833) | |
| 606-804, gnl|Mm7|chr12 (77143813-77143615) | |
| 606-804, gnl|monDom2|scaffold_8 (83076718-83076949) | |
| 606-804, gnl|oryCun1|scaffold_214380 (14454-14688) | |
| 606-804, gnl|panTro1|chr15 (66847414-66847648) | |
| 606-804, gnl|rheMac2|chr7 (130809167-130809401) | |
| 606-804, gnl|rn3|chr6 (101959568-101959802) | |
| 606-804, gnl|tetNig1|chr10 (11566144-11566369) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 15-229, gnl|bosTau2|chr10 (53677627-53677411) | |
| 15-229, gnl|Hg17|chr14 (67232312-67232099) | |
| 15-229, gnl|Mm7|chr12 (77150407-77150202) | |
| 346-503, gnl|bosTau2|chr10 (53673782-53673625) | |
| 346-503, gnl|canFam2|chr8 (44701423-44701541) | |
| 346-503, gnl|danRer3|chr13 (34666099-34666207) | |
| 346-503, gnl|dasNov1|scaffold_74394 (8650-8768) | |
| 346-503, gnl|echTel1|scaffold_308673 (10669-10787) | |
| 346-503, gnl|fr1|chrUn (278832495-278832611) | |
| 346-503, gnl|galGal2|chr5 (25796120-25796002) | |
| 346-503, gnl|hg17|chr14 (67228904-67229022) | |
| 346-503, gnl|Hg17|chr14 (67229065-67228908) | |
| 346-503, gnl|loxAfr1|scaffold_4201 (761-879) | |
| 346-503, gnl|mm7|chr12 (77146954-77147072) | |
| 346-503, gnl|Mm7|chr12 (77147115-77146958) | |
| 346-503, gnl|monDom2|scaffold_8 (83078773-83078891) | |
| 346-503, gnl|oryCun1|scaffold_214380 (17422-17540) | |
| 346-503, gnl|panTro1|chr15 (66849638-66849756) | |
| 346-503, gnl|rheMac2|chr7 (130811313-130811431) | |
| 346-503, gnl|rn3|chr6 (101962731-101962849) | |
| 346-503, gnl|tetNig1|chr10 (11566592-11566708) | |
| 606-804, gnl|bosTau2|chr10 (53671229-53671031) | |
| 606-804, gnl|canFam2|chr8 (44698807-44699040) | |
| 606-804, gnl|danRer3|chr13 (34663186-34663418) | |
| 606-804, gnl|dasNov1|scaffold_74394 (4482-4715) | |
| 606-804, gnl|echTel1|scaffold_308673 (32180-31940) | |
| 606-804, gnl|fr1|chrUn (278832005-278832244) | |
| 606-804, gnl|galGal2|chr5 (25797240-25797003) | |
| 606-804, gnl|hg17|chr14 (67226680-67226914) | |
| 606-804, gnl|Hg17|chr14 (67226894-67226696) | |
| 606-804, gnl|loxAfr1|scaffold_33270 (14515-14752) | |
| 606-804, gnl|mm7|chr12 (77143599-77143833) | |
| 606-804, gnl|Mm7|chr12 (77143813-77143615) | |
| 606-804, gnl|monDom2|scaffold_8 (83076718-83076949) | |
| 606-804, gnl|oryCun1|scaffold_214380 (14454-14688) | |
| 606-804, gnl|panTro1|chr15 (66847414-66847648) | |
| 606-804, gnl|rheMac2|chr7 (130809167-130809401) | |
| 606-804, gnl|rn3|chr6 (101959568-101959802) | |
| 606-804, gnl|tetNig1|chr10 (11566144-11566369) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jej (0.197844) | |
| nep (0.183925) | |
| ebs (0.118301) |