Non-Coding RNA Search

Ss1.1-Liv1-LVRM1D090176.5

Sequence:


               
               TCCAAAGTGAGTTATCTTCGCTCTTCTCCCACGGCGCCTCCCGGAGACCTTGGGGCCCTG
AGCGCCCAAGCTGTCCGGCAGGTTCTGAGGAGACCATGGAGGTGCGGCCGCCGGCTCCAC
GGAGCTTGCTCTGCAGGGCGCTGAATCCTTTCCCTCGGGTCTTTGCTGCTGGAGCTGTGG
CCACCGATTCCAAGGGTCTTGCGGAGGACCTTAAGCTGCCTTCCTGCGTCCCGGAAGCCC
GATACCCGGAATCCGGATGGGACCGACTCCGGGAGCTGTTTGTCAAAGAGTAAAAGTGCC
TACGTGAACAGCAGAGAACTTCAAAAGAACTTCAGGATATATACAAGGCAGCAATTTCAG
CAGGCATCATTGGCTGGGCATATGGGGGGATACCAGCTTTTATTCATGCTAAACAGCACT
ACATTGAGCAGAGCCAAGCAGAAGTGTACCATAACCAGTTTGATGCTGTGCACTCTGCAC
ATCGTGCTGCCACGAGAGGCTTCATCCGATATGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCAAAGTGAGTTATCTTCGCTCTTCTCCCACGGCGCCTCCCGGAGACCTTGGGGCCCTG
AGCGCCCAAGCTGTCCGGCAGGTTCTGAGGAGACCATGGAGGTGCGGCCGCCGGCTCCAC
GGAGCTTGCTCTGCAGGGCGCTGAATCCTTTCCCTCGGGTCTTTGCTGCTGGAGCTGTGG
CCACCGATTCCAAGGGTCTTGCGGAGGACCTTAAGCTGCCTTCCTGCGTCCCGGAAGCCC
GATACCCGGAATCCGGATGGGACCGACTCCGGGAGCTGTTTGTCAAAGAGTAAAAGTGCC
TACGTGAACAGCAGAGAACTTCAAAAGAACTTCAGGATATATACAAGGCAGCAATTTCAG
CAGGCATCATTGGCTGGGCATATGGGGGGATACCAGCTTTTATTCATGCTAAACAGCACT
ACATTGAGCAGAGCCAAGCAGAAGTGTACCATAACCAGTTTGATGCTGTGCACTCTGCAC
ATCGTGCTGCCACGAGAGGCTTCATCCGATATGGCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|12849739|dbj|BAB28461.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|12849739|dbj|BAB28461.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               10-304, gnl|bosTau2|chr1 (41222213-41222512)
               

               
               10-304, gnl|Hg17|chr3 (120700192-120700479)
               

               
               10-304, gnl|Mm7|chr16 (38230241-38229968)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-304, gnl|bosTau2|chr1 (41222213-41222512)
               

               
               10-304, gnl|Hg17|chr3 (120700192-120700479)
               

               
               10-304, gnl|Mm7|chr16 (38230241-38229968)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               mas (0.210305)
               

               
               tbr (0.154178)
               

               
               cty (0.10408)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)
               

               
               tbr (0.154178)
               

               
               cty (0.10408)

	10-304, gnl\|bosTau2\|chr1 (41222213-41222512)
	10-304, gnl\|Hg17\|chr3 (120700192-120700479)
	10-304, gnl\|Mm7\|chr16 (38230241-38229968)