Ss1.1-Liv1-LVRM1E010170.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCCTGCCGGCCGCCCGCCGGTCCGTGCGCGGGTCCTTCATCCCGCAGCCGAGCCCGCCT GCGAGCCGCCTGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCAGTCACAT GCCCCACGGAGGGAGCCCGAACAACCTCTGCCACACCCCGGGGCCCGCACACCCTCCTGA CCCCCAGAGGCACCCGAATGCCCTGTCTTTTCGCTGCTCGCTGGCCGACTTCCAGATCGA GAAGAAGATCGGCCGAGGCCAGTTCAGCGAGGTGTACAAGGCCACCTGCCTGCTGGACAG GAAGACAGTGGCTCTGAAGAAGGTGCAGATATTTGAGATGATGGATGCCAAGGCCAGGCA GGACTGTGTCAAGGAGATCGGCCTCCTGAAGCAACTGAATCATCCGAACATCATCAAGTA TTTGGACTCATTCATCGAGGACAACGAGCTGAACATCGTGCTGGAGCTGGCGGACGCAGG CGACCTCTCACAGATGATCAAGTATTTCAAGAAGCAGAAGCGGCCGGACGCGTGGGCGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCCTGCCGGCCGCCCGCCGGTCCGTGCGCGGGTCCTTCATCCCGCAGCCGAGCCCGCCT GCGAGCCGCCTGTGCCCTCGTGAGGCTGGCATGCAGGATGGCAGGACAGCCCAGTCACAT GCCCCACGGAGGGAGCCCGAACAACCTCTGCCACACCCCGGGGCCCGCACACCCTCCTGA CCCCCAGAGGCACCCGAATGCCCTGTCTTTTCGCTGCTCGCTGGCCGACTTCCAGATCGA GAAGAAGATCGGCCGAGGCCAGTTCAGCGAGGTGTACAAGGCCACCTGCCTGCTGGACAG GAAGACAGTGGCTCTGAAGAAGGTGCAGATATTTGAGATGATGGATGCCAAGGCCAGGCA GGACTGTGTCAAGGAGATCGGCCTCCTGAAGCAACTGAATCATCCGAACATCATCAAGTA TTTGGACTCATTCATCGAGGACAACGAGCTGAACATCGTGCTGGAGCTGGCGGACGCAGG CGACCTCTCACAGATGATCAAGTATTTCAAGAAGCAGAAGCGGCCGGACGCGTGGGCGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 175-328, gnl|bosTau2|chr11 (72664878-72665032) | |
| 175-328, gnl|Hg17|chr9 (124154329-124154482) | |
| 175-328, gnl|Mm7|chr2 (38565113-38565267) | |
| 390-502, gnl|bosTau2|chr11 (72669807-72669919) | |
| 390-502, gnl|canFam2|chr9 (61962412-61962272) | |
| 390-502, gnl|danRer3|chrUn (21502468-21502605) | |
| 390-502, gnl|dasNov1|scaffold_205120 (1846-1706) | |
| 390-502, gnl|echTel1|scaffold_317938 (165150-165014) | |
| 390-502, gnl|fr1|chrUn (140780730-140780593) | |
| 390-502, gnl|galGal2|chr17 (1081897-1081757) | |
| 390-502, gnl|hg17|chr9 (124163269-124163408) | |
| 390-502, gnl|Hg17|chr9 (124163290-124163402) | |
| 390-502, gnl|loxAfr1|scaffold_4314 (1700-1568) | |
| 390-502, gnl|mm7|chr2 (38568179-38568308) | |
| 390-502, gnl|Mm7|chr2 (38568190-38568302) | |
| 390-502, gnl|monDom2|scaffold_38 (18179443-18179579) | |
| 390-502, gnl|oryCun1|scaffold_143666 (4-128) | |
| 390-502, gnl|panTro1|chr11 (108906119-108906258) | |
| 390-502, gnl|rheMac2|chr15 (11433165-11433026) | |
| 390-502, gnl|rn3|chr3 (18255907-18256034) | |
| 390-502, gnl|tetNig1|chr1 (15025444-15025305) | |
| 390-502, gnl|xenTro1|scaffold_448 (380994-380876) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 175-328, gnl|bosTau2|chr11 (72664878-72665032) | |
| 175-328, gnl|Hg17|chr9 (124154329-124154482) | |
| 175-328, gnl|Mm7|chr2 (38565113-38565267) | |
| 390-502, gnl|bosTau2|chr11 (72669807-72669919) | |
| 390-502, gnl|canFam2|chr9 (61962412-61962272) | |
| 390-502, gnl|danRer3|chrUn (21502468-21502605) | |
| 390-502, gnl|dasNov1|scaffold_205120 (1846-1706) | |
| 390-502, gnl|echTel1|scaffold_317938 (165150-165014) | |
| 390-502, gnl|fr1|chrUn (140780730-140780593) | |
| 390-502, gnl|galGal2|chr17 (1081897-1081757) | |
| 390-502, gnl|hg17|chr9 (124163269-124163408) | |
| 390-502, gnl|Hg17|chr9 (124163290-124163402) | |
| 390-502, gnl|loxAfr1|scaffold_4314 (1700-1568) | |
| 390-502, gnl|mm7|chr2 (38568179-38568308) | |
| 390-502, gnl|Mm7|chr2 (38568190-38568302) | |
| 390-502, gnl|monDom2|scaffold_38 (18179443-18179579) | |
| 390-502, gnl|oryCun1|scaffold_143666 (4-128) | |
| 390-502, gnl|panTro1|chr11 (108906119-108906258) | |
| 390-502, gnl|rheMac2|chr15 (11433165-11433026) | |
| 390-502, gnl|rn3|chr3 (18255907-18256034) | |
| 390-502, gnl|tetNig1|chr1 (15025444-15025305) | |
| 390-502, gnl|xenTro1|scaffold_448 (380994-380876) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |