Ss1.1-Liv1-LVRM1E080087.5
|
CCATGATCGACATCGTCTGCTGCCCGACCCCCTTCCTGGTCGGCCTGCTCTCCAGCTCCC
TCCCCAAGCTGAAGGAGCTGCCTGTGGAGGAGGCGCTGATGGTGAACCTGGGGTCGGACC
GATTCATCCGACAGATGGATGACGAGGACACGCTGTTACCCAGGAAGTTGCAGGCGGCCC
TGGAGCAGGCCCTCGAGAGGAAGAACGAGCTGATCTCCCAGGACTCTGACAGCGACTCCG
AGGATGAGTGCCACACCCTCAACGGGCTGGTGTCGGAGGTGTTCATCCGGTTCTTCGTGG
AGGCCGTGGGGCACTACTCCCTCTTCCTGACCCAGACGGAGAAGGGCGAGAGGGCCTTTC
AGCGAGAGGCTTTCCGCAAGTCTGTGGCCTCCAAGAGCATCCGCCGCTTTCTCGAAGTTT
TCATGGAGTCTCAGATGTTTGCCGGCTTCATCCAAGACAGGGAGCTGAGAAAGTGTCGGG
CAAAGGGCCTCTTTGAGCAGCGAGTGGAGCAGTACCTGGAGGAGCTCCCGGACACCGAGC
AGAGCGGGATGAACAAGTTTCTGCGAGGTCTGGGCAACAAGATGAAGTTCCTCCACAAGA
AGACTTAACTCTTGCCGGCGCCTCGCGGAGCCCGGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCATGATCGACATCGTCTGCTGCCCGACCCCCTTCCTGGTCGGCCTGCTCTCCAGCTCCC
TCCCCAAGCTGAAGGAGCTGCCTGTGGAGGAGGCGCTGATGGTGAACCTGGGGTCGGACC
GATTCATCCGACAGATGGATGACGAGGACACGCTGTTACCCAGGAAGTTGCAGGCGGCCC
TGGAGCAGGCCCTCGAGAGGAAGAACGAGCTGATCTCCCAGGACTCTGACAGCGACTCCG
AGGATGAGTGCCACACCCTCAACGGGCTGGTGTCGGAGGTGTTCATCCGGTTCTTCGTGG
AGGCCGTGGGGCACTACTCCCTCTTCCTGACCCAGACGGAGAAGGGCGAGAGGGCCTTTC
AGCGAGAGGCTTTCCGCAAGTCTGTGGCCTCCAAGAGCATCCGCCGCTTTCTCGAAGTTT
TCATGGAGTCTCAGATGTTTGCCGGCTTCATCCAAGACAGGGAGCTGAGAAAGTGTCGGG
CAAAGGGCCTCTTTGAGCAGCGAGTGGAGCAGTACCTGGAGGAGCTCCCGGACACCGAGC
AGAGCGGGATGAACAAGTTTCTGCGAGGTCTGGGCAACAAGATGAAGTTCCTCCACAAGA
AGACTTAACTCTTGCCGGCGCCTCGCGGAGCCCGGG
|
|
gi|61836551|ref|XP_605281.1| |
Protein identifier
|
gi|61836551|ref|XP_605281.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
246-487, gnl|bosTau2|chr15 (30256758-30256517) |
|
246-487, gnl|canFam2|chr21 (35300872-35301087) |
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246-487, gnl|danRer3|chr7 (19195139-19194933) |
|
246-487, gnl|dasNov1|scaffold_8948 (46977-47192) |
|
246-487, gnl|echTel1|scaffold_249622 (4736-4940) |
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246-487, gnl|fr1|chrUn (201680033-201680235) |
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246-487, gnl|galGal2|chr5 (7252231-7252027) |
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246-487, gnl|hg17|chr11 (8674535-8674750) |
|
246-487, gnl|Hg17|chr11 (8674790-8674549) |
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246-487, gnl|loxAfr1|scaffold_5933 (30839-30615) |
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246-487, gnl|mm7|chr7 (105440806-105441010) |
|
246-487, gnl|Mm7|chr7 (105441050-105440809) |
|
246-487, gnl|monDom2|scaffold_10 (58743484-58743714) |
|
246-487, gnl|oryCun1|scaffold_119156 (494-709) |
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246-487, gnl|panTro1|chr9 (8837418-8837633) |
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246-487, gnl|rheMac2|chr14 (63251391-63251176) |
|
246-487, gnl|rn3|chr1 (167231903-167232107) |
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246-487, gnl|tetNig1|chr5 (6476376-6476168) |
|
246-487, gnl|xenTro1|scaffold_1393 (33023-32806) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
246-487, gnl|bosTau2|chr15 (30256758-30256517) |
|
246-487, gnl|canFam2|chr21 (35300872-35301087) |
|
246-487, gnl|danRer3|chr7 (19195139-19194933) |
|
246-487, gnl|dasNov1|scaffold_8948 (46977-47192) |
|
246-487, gnl|echTel1|scaffold_249622 (4736-4940) |
|
246-487, gnl|fr1|chrUn (201680033-201680235) |
|
246-487, gnl|galGal2|chr5 (7252231-7252027) |
|
246-487, gnl|hg17|chr11 (8674535-8674750) |
|
246-487, gnl|Hg17|chr11 (8674790-8674549) |
|
246-487, gnl|loxAfr1|scaffold_5933 (30839-30615) |
|
246-487, gnl|mm7|chr7 (105440806-105441010) |
|
246-487, gnl|Mm7|chr7 (105441050-105440809) |
|
246-487, gnl|monDom2|scaffold_10 (58743484-58743714) |
|
246-487, gnl|oryCun1|scaffold_119156 (494-709) |
|
246-487, gnl|panTro1|chr9 (8837418-8837633) |
|
246-487, gnl|rheMac2|chr14 (63251391-63251176) |
|
246-487, gnl|rn3|chr1 (167231903-167232107) |
|
246-487, gnl|tetNig1|chr5 (6476376-6476168) |
|
246-487, gnl|xenTro1|scaffold_1393 (33023-32806) |
|
elu (0.385356) |
|
pla (0.133672) |
|
eep (0.122564) |
|
eru (0.120048) |
|
jca (0.11396) |
|
elu (0.385356) |
|
pla (0.133672) |
|
eep (0.122564) |
|
eru (0.120048) |
|
jca (0.11396) |
