Non-Coding RNA Search

Ss1.1-Liv1-LVRM1E080164.5

Sequence:


               
               AAGCAGAAAATGGCGCCTGCGAATGAGCAAAGTTTGTGACGCGACGAGGTTTTTGCCTCT
GGCGGAGCCCTTCCCAGGACGGGAGAAAGTGCAGGTTCCTCGTGGAGCAGCACTGGTACC
AGAAGTGGGAAGAGTACGTGCAGGGAGGAGACCAGGACTCCAGCACCTCCCCTGGCTGCA
TCAACAATGCTGGGCTCTTTGAAGACCAGGTAAACTGGCGCCTCAAGAAGGGACTGGTGG
AAGGTGAGGACTATGTGCTGCTCCCAGCGGCTGCTTGGCATTACCTGGTCAACTGGTATG
GTCTAGAGCATGGCCAGCCTCCTGTCGAACGCAAGGTCGTGGAGCTGCCCGGCATCCAGA
AGGTCGAAGTGTACCCAGTAGAACTGCTGCTTGTCCAGCACAGTGATATGGACACAGCCC
ACACTGCTCAATTCAGCCACACAGATTCGCTCGACCTCGTCTTACACACCGCGCGGGAGC
AGTTTCTGGTGAGCCCCCAGGAGGAGACACGGCTGTGGATCAAGAACGCAGAGGGCTCCT
TTGAGAGGTTGTGCAACACACACGTCACAGTGCTTGACGCCGCTCTCAAGACTGGGCAGG
TGGTCATCATGGAGACCCGAAACAAGGATGGCACTTGGCCCAGCGCACAGCCGCACGCCA
TGTGAGCCCTTGGGGTTTCCGGTTCAGAGTGGGGTCCCGCCGTAGGCAGAACGACCGAGC
CCCTGAGCGCATCTCACCTGCAGGTAGCAGGGCCTCAGCTCATAAGGGTTTCTCATCCAC
CCCAGGAACAGCGCCACGGAGGAGGAGGAGGACTTCCAGGGCCAGCCAGGCATCTGCGGT
CTCACCAATCTGGGCAACACGTGCTTCATGAACTCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGCAGAAAATGGCGCCTGCGAATGAGCAAAGTTTGTGACGCGACGAGGTTTTTGCCTCT
GGCGGAGCCCTTCCCAGGACGGGAGAAAGTGCAGGTTCCTCGTGGAGCAGCACTGGTACC
AGAAGTGGGAAGAGTACGTGCAGGGAGGAGACCAGGACTCCAGCACCTCCCCTGGCTGCA
TCAACAATGCTGGGCTCTTTGAAGACCAGGTAAACTGGCGCCTCAAGAAGGGACTGGTGG
AAGGTGAGGACTATGTGCTGCTCCCAGCGGCTGCTTGGCATTACCTGGTCAACTGGTATG
GTCTAGAGCATGGCCAGCCTCCTGTCGAACGCAAGGTCGTGGAGCTGCCCGGCATCCAGA
AGGTCGAAGTGTACCCAGTAGAACTGCTGCTTGTCCAGCACAGTGATATGGACACAGCCC
ACACTGCTCAATTCAGCCACACAGATTCGCTCGACCTCGTCTTACACACCGCGCGGGAGC
AGTTTCTGGTGAGCCCCCAGGAGGAGACACGGCTGTGGATCAAGAACGCAGAGGGCTCCT
TTGAGAGGTTGTGCAACACACACGTCACAGTGCTTGACGCCGCTCTCAAGACTGGGCAGG
TGGTCATCATGGAGACCCGAAACAAGGATGGCACTTGGCCCAGCGCACAGCCGCACGCCA
TGTGAGCCCTTGGGGTTTCCGGTTCAGAGTGGGGTCCCGCCGTAGGCAGAACGACCGAGC
CCCTGAGCGCATCTCACCTGCAGGTAGCAGGGCCTCAGCTCATAAGGGTTTCTCATCCAC
CCCAGGAACAGCGCCACGGAGGAGGAGGAGGACTTCCAGGGCCAGCCAGGCATCTGCGGT
CTCACCAATCTGGGCAACACGTGCTTCATGAACTCG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-660, gnl|bosTau2|chr27 (17720706-17721340)
               

               
               1-660, gnl|Mm7|chrX (19144896-19146398)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-660, gnl|bosTau2|chr27 (17720706-17721340)
               

               
               1-660, gnl|Mm7|chrX (19144896-19146398)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               ebs (0.236602)
               

               
               clu (0.119646)
               

               
               med (0.116252)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.236602)
               

               
               clu (0.119646)
               

               
               med (0.116252)

	1-660, gnl\|bosTau2\|chr27 (17720706-17721340)
	1-660, gnl\|Mm7\|chrX (19144896-19146398)