Ss1.1-Liv1-LVRM1F100165.5
|
CGGAGCGCGCCGGCCTCGTGGCTTGGTTTCTATCAAAGCAGAAGAAATAGAGGTGAACTA
CAAAAAGTGAGAACCAGTTTCCTCTGTACTCTGCAATCTAGGAGAAAAAACTCATCCAAG
GACAGATCAGGTGCTGTTTTTCAACCCTAAACTTTTGACCAAGAATGAAACTCTTTAAAA
ATTAAGATGCCAACAGATCACGAAGAGCCCTGTGGTCCCAGTCACAGGTCATTTTGCCTG
AATGGAGGGATTTGTTATGTGATACCTACTATTCCCAGCCCCTTTTGTAGGAAGTGAACT
GATGCTGGCTTCTCTTTGTCTTATTCCAAGTTGGGGCATGAGATTTTGCCTGCATTAGAA
GGTTGTTGAGACCTGAAGCCTGGGTAGATGCATCGAAAATTACACAGGAGCTCGTTGTGA
AGAGGTTTTTCTCCCAAGTTCCAGCATCCAAACTGAAAGTGACCTGTTCACAACTTTTGC
AGCATTGGCTGTTCTTCTGGGGACTCTCATCATTGGAGTCCTCTACTTCCTTTGCAGGAA
GGGCCACCTTCAGAGGGCCAGTTCAGTCCAGTATGATATCAGCCTGGTAGAGACAAGCAG
TACCAGTGCCCACCACAGTCATGCAGAACATTGAAGAAATACCATAGTGAACTCAAAATC
GTTGCTTCTTTGTTACAAAGGCAGAAAATGAAGCACCATACGGTAAAAGAATCAAATGAG
TTAATCCTTCTTTGTCCTCTAAATAAAAGACTGAAAGTTATTATAACC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGGAGCGCGCCGGCCTCGTGGCTTGGTTTCTATCAAAGCAGAAGAAATAGAGGTGAACTA
CAAAAAGTGAGAACCAGTTTCCTCTGTACTCTGCAATCTAGGAGAAAAAACTCATCCAAG
GACAGATCAGGTGCTGTTTTTCAACCCTAAACTTTTGACCAAGAATGAAACTCTTTAAAA
ATTAAGATGCCAACAGATCACGAAGAGCCCTGTGGTCCCAGTCACAGGTCATTTTGCCTG
AATGGAGGGATTTGTTATGTGATACCTACTATTCCCAGCCCCTTTTGTAGGAAGTGAACT
GATGCTGGCTTCTCTTTGTCTTATTCCAAGTTGGGGCATGAGATTTTGCCTGCATTAGAA
GGTTGTTGAGACCTGAAGCCTGGGTAGATGCATCGAAAATTACACAGGAGCTCGTTGTGA
AGAGGTTTTTCTCCCAAGTTCCAGCATCCAAACTGAAAGTGACCTGTTCACAACTTTTGC
AGCATTGGCTGTTCTTCTGGGGACTCTCATCATTGGAGTCCTCTACTTCCTTTGCAGGAA
GGGCCACCTTCAGAGGGCCAGTTCAGTCCAGTATGATATCAGCCTGGTAGAGACAAGCAG
TACCAGTGCCCACCACAGTCATGCAGAACATTGAAGAAATACCATAGTGAACTCAAAATC
GTTGCTTCTTTGTTACAAAGGCAGAAAATGAAGCACCATACGGTAAAAGAATCAAATGAG
TTAATCCTTCTTTGTCCTCTAAATAAAAGACTGAAAGTTATTATAACC
|
|
gi|31874243|emb|CAD98015.1| |
Protein identifier
|
gi|31874243|emb|CAD98015.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
385-538, gnl|bosTau2|chr21 (20787018-20786865) |
|
385-538, gnl|canFam2|chr29 (10487885-10487742) |
|
385-538, gnl|dasNov1|scaffold_190021 (2617-2465) |
|
385-538, gnl|galGal2|chr10 (4276963-4276808) |
|
385-538, gnl|hg17|chr15 (74041220-74041373) |
|
385-538, gnl|Hg17|chr15 (74041373-74041223) |
|
385-538, gnl|mm7|chr9 (55272369-55272522) |
|
385-538, gnl|Mm7|chr9 (55272522-55272372) |
|
385-538, gnl|oryCun1|scaffold_199515 (38272-38425) |
|
385-538, gnl|panTro1|chr16_random (24823633-24823480) |
|
385-538, gnl|rheMac2|chr7 (54942078-54942231) |
|
385-538, gnl|rn3|chr8 (58807051-58807204) |
| |
|
618-761, gnl|bosTau2|chr21 (20777375-20777237) |
|
618-761, gnl|Hg17|chr15 (74023050-74022910) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
385-538, gnl|bosTau2|chr21 (20787018-20786865) |
|
385-538, gnl|canFam2|chr29 (10487885-10487742) |
|
385-538, gnl|dasNov1|scaffold_190021 (2617-2465) |
|
385-538, gnl|galGal2|chr10 (4276963-4276808) |
|
385-538, gnl|hg17|chr15 (74041220-74041373) |
|
385-538, gnl|Hg17|chr15 (74041373-74041223) |
|
385-538, gnl|mm7|chr9 (55272369-55272522) |
|
385-538, gnl|Mm7|chr9 (55272522-55272372) |
|
385-538, gnl|oryCun1|scaffold_199515 (38272-38425) |
|
385-538, gnl|panTro1|chr16_random (24823633-24823480) |
|
385-538, gnl|rheMac2|chr7 (54942078-54942231) |
|
385-538, gnl|rn3|chr8 (58807051-58807204) |
| |
|
618-761, gnl|bosTau2|chr21 (20777375-20777237) |
|
618-761, gnl|Hg17|chr15 (74023050-74022910) |
|
cte (0.29274) |
|
pla (0.133672) |
|
cte (0.29274) |
|
pla (0.133672) |
