Non-Coding RNA Search

Ss1.1-Liv1-LVRM1G010182.5

Sequence:


               
               CCTGCTCACTGCGCCCGCGCTCGCCTCCTTCCCCGCCTTCCACATTTCCCCGGCTCTTCG
GTTTTCGCGGCCACCCCGCAGCCGTCGCCCAGGTGCCATGGCCGCTATGTACCGCCCCGG
CCTGCGGCTTAGCTGGCATGGGCTGAGCTCCTGGGGATGGTCATCACGGCGCAGCATCCA
GGCCCTGCGAGTACTCAATGGAGATCTGGGCCAGCTGCCTGCTGGGGTTCGAGACTTTGT
GGAGCGCAGCGCCCGCCTCTGCCAACCAGAGGGCATCCACATCTGTGATGGGACTGAGGC
AGAGAACACTGCCACCCTGGCTCTGCTGGAACAGCAGGGCCTCATCCGAAAGCTCCCCAA
GTACAACAACTGCTGGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGTAGAAAGCAA
GACGGTGATTGTAACTCCTTCTCAACGGGACACGGTGCCCCTCCCAGCTGGTGGGGCCCG
TGGGCAGCTGGGCAACTGGATGTCCCCAGCTGAGTTCCAGCAAGCTGTGGATGAGAGGTT
TCCAGGCTGCATGCAGGGCCGAACCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGGG
CTCCCCACTGTCCCGCATCGGAGTGCAGCTCACGGACTCAGCCTATGTGGTGGCTAGTAT
GCGGATTATGACCCGACTGGGGAAACCTGTGCTTCAGGCCCTGGGAGATGGCGACTTCGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGCTCACTGCGCCCGCGCTCGCCTCCTTCCCCGCCTTCCACATTTCCCCGGCTCTTCG
GTTTTCGCGGCCACCCCGCAGCCGTCGCCCAGGTGCCATGGCCGCTATGTACCGCCCCGG
CCTGCGGCTTAGCTGGCATGGGCTGAGCTCCTGGGGATGGTCATCACGGCGCAGCATCCA
GGCCCTGCGAGTACTCAATGGAGATCTGGGCCAGCTGCCTGCTGGGGTTCGAGACTTTGT
GGAGCGCAGCGCCCGCCTCTGCCAACCAGAGGGCATCCACATCTGTGATGGGACTGAGGC
AGAGAACACTGCCACCCTGGCTCTGCTGGAACAGCAGGGCCTCATCCGAAAGCTCCCCAA
GTACAACAACTGCTGGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGTAGAAAGCAA
GACGGTGATTGTAACTCCTTCTCAACGGGACACGGTGCCCCTCCCAGCTGGTGGGGCCCG
TGGGCAGCTGGGCAACTGGATGTCCCCAGCTGAGTTCCAGCAAGCTGTGGATGAGAGGTT
TCCAGGCTGCATGCAGGGCCGAACCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGGG
CTCCCCACTGTCCCGCATCGGAGTGCAGCTCACGGACTCAGCCTATGTGGTGGCTAGTAT
GCGGATTATGACCCGACTGGGGAAACCTGTGCTTCAGGCCCTGGGAGATGGCGACTTCGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               126-372, gnl|bosTau2|chr10 (12400702-12400456)
               

               
               126-372, gnl|Hg17|chr14 (23635940-23636186)
               

               
               126-372, gnl|Mm7|chr14 (50409277-50409523)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               126-372, gnl|bosTau2|chr10 (12400702-12400456)
               

               
               126-372, gnl|Hg17|chr14 (23635940-23636186)
               

               
               126-372, gnl|Mm7|chr14 (50409277-50409523)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               jej (0.0989218)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.0989218)

	126-372, gnl\|bosTau2\|chr10 (12400702-12400456)
	126-372, gnl\|Hg17\|chr14 (23635940-23636186)
	126-372, gnl\|Mm7\|chr14 (50409277-50409523)