Ss1.1-Liv1-LVRM1G030182.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGGAGCGGGAAACCGGGTCTCTTGAAGAATCTACAGATGAGTCTGAGGAAGAAGAAAGT GAGGAGGAGCCCAAACTGAAGTATGAAAGGCTCTCCAATGGGGTAACGGAAATCCTTCAG AAGGATGCGGCCAGCTGCATGACAGTCCATGACAAGTTCTTGGCCCTGGGCACGCATTAC GGCAAAGTGTATCTGCTGGACGTGCAGGGGAACATCACTCAGAAGTTCGATGTAAGTTGC GTGAAGATAAATCAGATAAGCCTGGATGAAAGCGGAGAGCACATGGGCGTGTGTTCCGAG GACGGCAAGGTTCAGGTGTTTGGACTGTATTCTGGAGAAGAATTTCATGAGACTTTCGAC TGTCCCATTAAAATCATCGCCGTGCATCCACATTTCCTGAGGTCCAGCTGCAAGCAGTTC GTGACCGGCGGCAAGAAGTTGCTGCTGTTCGAACGGTCTTGGATGAGCAGGTGGAAGTCG TCGGTTCTGCATGAAGGAGAAGGGAACATCAGGAGCGTGAAGTGGAGGGGCCATCTGATT GCCTGGGCGAACAACATGGGTGTGAAGATTTTTGACGTCACCTCAAAGCAGAGGATCACC AACGTGCCCAGGGACGATGTGAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGGAGCGGGAAACCGGGTCTCTTGAAGAATCTACAGATGAGTCTGAGGAAGAAGAAAGT GAGGAGGAGCCCAAACTGAAGTATGAAAGGCTCTCCAATGGGGTAACGGAAATCCTTCAG AAGGATGCGGCCAGCTGCATGACAGTCCATGACAAGTTCTTGGCCCTGGGCACGCATTAC GGCAAAGTGTATCTGCTGGACGTGCAGGGGAACATCACTCAGAAGTTCGATGTAAGTTGC GTGAAGATAAATCAGATAAGCCTGGATGAAAGCGGAGAGCACATGGGCGTGTGTTCCGAG GACGGCAAGGTTCAGGTGTTTGGACTGTATTCTGGAGAAGAATTTCATGAGACTTTCGAC TGTCCCATTAAAATCATCGCCGTGCATCCACATTTCCTGAGGTCCAGCTGCAAGCAGTTC GTGACCGGCGGCAAGAAGTTGCTGCTGTTCGAACGGTCTTGGATGAGCAGGTGGAAGTCG TCGGTTCTGCATGAAGGAGAAGGGAACATCAGGAGCGTGAAGTGGAGGGGCCATCTGATT GCCTGGGCGAACAACATGGGTGTGAAGATTTTTGACGTCACCTCAAAGCAGAGGATCACC AACGTGCCCAGGGACGATGTGAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 47-156, gnl|bosTau2|chr4 (46516171-46516062) | |
| 47-156, gnl|canFam2|chr18 (13808389-13808252) | |
| 47-156, gnl|danRer3|chr24 (6729733-6729848) | |
| 47-156, gnl|dasNov1|scaffold_82836 (636-749) | |
| 47-156, gnl|echTel1|scaffold_208896 (234-100) | |
| 47-156, gnl|fr1|chrUn (3193533-3193667) | |
| 47-156, gnl|galGal2|chr2 (48468806-48468949) | |
| 47-156, gnl|hg17|chr7 (38681963-38682100) | |
| 47-156, gnl|Hg17|chr7 (38682095-38681986) | |
| 47-156, gnl|mm7|chr13 (18105394-18105261) | |
| 47-156, gnl|Mm7|chr13 (18105264-18105370) | |
| 47-156, gnl|monDom2|scaffold_76 (5476455-5476582) | |
| 47-156, gnl|panTro1|chr6 (39902757-39902894) | |
| 47-156, gnl|rheMac2|chr3 (87393707-87393570) | |
| 47-156, gnl|rn3|chr17 (54045432-54045565) | |
| 47-156, gnl|tetNig1|chr6 (4644117-4644230) | |
| 437-559, gnl|bosTau2|chr4 (46441312-46441190) | |
| 437-559, gnl|canFam2|chr18 (13872310-13872118) | |
| 437-559, gnl|danRer3|chr24 (6709990-6710159) | |
| 437-559, gnl|dasNov1|scaffold_274999 (860-1069) | |
| 437-559, gnl|echTel1|scaffold_320893 (94893-94676) | |
| 437-559, gnl|fr1|chrUn (3188638-3188798) | |
| 437-559, gnl|galGal2|chr2 (48430885-48431042) | |
| 437-559, gnl|hg17|chr7 (38609571-38609780) | |
| 437-559, gnl|Hg17|chr7 (38609706-38609584) | |
| 437-559, gnl|mm7|chr13 (18176279-18176074) | |
| 437-559, gnl|Mm7|chr13 (18176143-18176265) | |
| 437-559, gnl|monDom2|scaffold_76 (5408644-5408803) | |
| 437-559, gnl|oryCun1|scaffold_202709 (4056-4255) | |
| 437-559, gnl|panTro1|chr6 (39828418-39828627) | |
| 437-559, gnl|rheMac2|chr3 (87466326-87466117) | |
| 437-559, gnl|rn3|chr17 (53964753-53964909) | |
| 437-559, gnl|tetNig1|chr6 (4639221-4639347) | |
| 437-559, gnl|xenTro1|scaffold_106 (237213-237415) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 47-156, gnl|bosTau2|chr4 (46516171-46516062) | |
| 47-156, gnl|canFam2|chr18 (13808389-13808252) | |
| 47-156, gnl|danRer3|chr24 (6729733-6729848) | |
| 47-156, gnl|dasNov1|scaffold_82836 (636-749) | |
| 47-156, gnl|echTel1|scaffold_208896 (234-100) | |
| 47-156, gnl|fr1|chrUn (3193533-3193667) | |
| 47-156, gnl|galGal2|chr2 (48468806-48468949) | |
| 47-156, gnl|hg17|chr7 (38681963-38682100) | |
| 47-156, gnl|Hg17|chr7 (38682095-38681986) | |
| 47-156, gnl|mm7|chr13 (18105394-18105261) | |
| 47-156, gnl|Mm7|chr13 (18105264-18105370) | |
| 47-156, gnl|monDom2|scaffold_76 (5476455-5476582) | |
| 47-156, gnl|panTro1|chr6 (39902757-39902894) | |
| 47-156, gnl|rheMac2|chr3 (87393707-87393570) | |
| 47-156, gnl|rn3|chr17 (54045432-54045565) | |
| 47-156, gnl|tetNig1|chr6 (4644117-4644230) | |
| 437-559, gnl|bosTau2|chr4 (46441312-46441190) | |
| 437-559, gnl|canFam2|chr18 (13872310-13872118) | |
| 437-559, gnl|danRer3|chr24 (6709990-6710159) | |
| 437-559, gnl|dasNov1|scaffold_274999 (860-1069) | |
| 437-559, gnl|echTel1|scaffold_320893 (94893-94676) | |
| 437-559, gnl|fr1|chrUn (3188638-3188798) | |
| 437-559, gnl|galGal2|chr2 (48430885-48431042) | |
| 437-559, gnl|hg17|chr7 (38609571-38609780) | |
| 437-559, gnl|Hg17|chr7 (38609706-38609584) | |
| 437-559, gnl|mm7|chr13 (18176279-18176074) | |
| 437-559, gnl|Mm7|chr13 (18176143-18176265) | |
| 437-559, gnl|monDom2|scaffold_76 (5408644-5408803) | |
| 437-559, gnl|oryCun1|scaffold_202709 (4056-4255) | |
| 437-559, gnl|panTro1|chr6 (39828418-39828627) | |
| 437-559, gnl|rheMac2|chr3 (87466326-87466117) | |
| 437-559, gnl|rn3|chr17 (53964753-53964909) | |
| 437-559, gnl|tetNig1|chr6 (4639221-4639347) | |
| 437-559, gnl|xenTro1|scaffold_106 (237213-237415) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.119646) | |
| ebs (0.118301) |