Non-Coding RNA Search

Ss1.1-Liv1-LVRM1G070181.5

Sequence:


               
               AGCATTCATCCTGCATCAAAAGCAACTTAATTTAAAATTATGATTTTAGTAACTGATGGC
ATAGAGATTAACACTGATTCAACCAAATCAAGTATTACTGATTTTAGGCTCTACAAAATC
TTCATGGGGTGATTGGTTTTAAGTATTTGACATTTCGCAGGAATTCATTGTGAGCTATTT
ACTCAGTGGGACTTTACTAAGTGCTCTTTTGGCAAATTTATCTGAAAAGACATTCTTTCC
TGAGATTTAAAATAATAGAGGACTATGAATTAAGAAAAAAACATTTTCCAGTTTTTAGGT
CAATATGTTACATTTATAGAAGTAGGAATTTGCTGTGATTATTCATGCCAGGATGGATTT
AGATGAGATACATATGCATTATGGACTTTTCTGTGGCATTCTTTGGATTTAAAGTTGATG
TCAGAATATCTAAATTAACCATCTACCTTTCTATCTCTTATCTAGTCTTTTTTCTAAGAG
AGCCACTGAGGGATTAGCACATCCAATTGGGAATTAAGAGGACAGGCCTGTTTTCGTTTA
TTCACTTTTGTTTTTGTTCTTATTCACTTATTAAGCAAAAACTTTGGTCCTGTACAGTAT
TTCAGGCATTATGGTAGGCAGTGGGTTTATAGAAATGAAAGATAAGTTATCAGCCTAAGT
GCATTTGGTTTAATTGGATATTCTCCTGATTTCCAGTAACTTTGGATAAGTTACTTACCT
CCTCTAAGCCTCCTTTTCCTCAAATGTAAGATGGGATTGGACCAGATGGTTAGTTTATAA
AGTGTCCTTCAAAGCTTTAAGATTTTTTAGCTTAAAGTGATTAAATATGGCCACCTTCTC
TGCCATTTAAAATGTGAAGCTGTTGTATTTAATTCTGCTTGGAAAATTGTTTTGTATCAA
GGAAGTAAGTTTTGTAGAGAATGTTTTATCATTAAATAAATCATAAAATTATTTATCAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCATTCATCCTGCATCAAAAGCAACTTAATTTAAAATTATGATTTTAGTAACTGATGGC
ATAGAGATTAACACTGATTCAACCAAATCAAGTATTACTGATTTTAGGCTCTACAAAATC
TTCATGGGGTGATTGGTTTTAAGTATTTGACATTTCGCAGGAATTCATTGTGAGCTATTT
ACTCAGTGGGACTTTACTAAGTGCTCTTTTGGCAAATTTATCTGAAAAGACATTCTTTCC
TGAGATTTAAAATAATAGAGGACTATGAATTAAGAAAAAAACATTTTCCAGTTTTTAGGT
CAATATGTTACATTTATAGAAGTAGGAATTTGCTGTGATTATTCATGCCAGGATGGATTT
AGATGAGATACATATGCATTATGGACTTTTCTGTGGCATTCTTTGGATTTAAAGTTGATG
TCAGAATATCTAAATTAACCATCTACCTTTCTATCTCTTATCTAGTCTTTTTTCTAAGAG
AGCCACTGAGGGATTAGCACATCCAATTGGGAATTAAGAGGACAGGCCTGTTTTCGTTTA
TTCACTTTTGTTTTTGTTCTTATTCACTTATTAAGCAAAAACTTTGGTCCTGTACAGTAT
TTCAGGCATTATGGTAGGCAGTGGGTTTATAGAAATGAAAGATAAGTTATCAGCCTAAGT
GCATTTGGTTTAATTGGATATTCTCCTGATTTCCAGTAACTTTGGATAAGTTACTTACCT
CCTCTAAGCCTCCTTTTCCTCAAATGTAAGATGGGATTGGACCAGATGGTTAGTTTATAA
AGTGTCCTTCAAAGCTTTAAGATTTTTTAGCTTAAAGTGATTAAATATGGCCACCTTCTC
TGCCATTTAAAATGTGAAGCTGTTGTATTTAATTCTGCTTGGAAAATTGTTTTGTATCAA
GGAAGTAAGTTTTGTAGAGAATGTTTTATCATTAAATAAATCATAAAATTATTTATCAGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-607, gnl|bosTau2|chr3 (18017698-18017096)
               

               
               4-607, gnl|Hg17|chr1 (142416442-142415927)
               

               
               4-607, gnl|Mm7|chr3 (97634731-97634133)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-607, gnl|bosTau2|chr3 (18017698-18017096)
               

               
               4-607, gnl|Hg17|chr1 (142416442-142415927)
               

               
               4-607, gnl|Mm7|chr3 (97634731-97634133)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	4-607, gnl\|bosTau2\|chr3 (18017698-18017096)
	4-607, gnl\|Hg17\|chr1 (142416442-142415927)
	4-607, gnl\|Mm7\|chr3 (97634731-97634133)