Non-Coding RNA Search

Ss1.1-Liv1-LVRM1H010090.5

Sequence:


               
               CGCAGCTCTCGGCGCCCGCCCGCCGACCGCCTGGCCCCGGGCTGCCTCCCTTCCTCCCTC
CCTCCCTCTCCCTTGCGCTCTCTCGTTCGCTAGCCCTCGGCGCATGGGCCCCGCGCCGGG
CCCCGGGGCCTCGGGCCGCCGGGCCTCCGGGGTCCCCTAGGCCCTAACGTGGGCGGGGCA
GCCCTGCCTGAGGCAGCTCTGTACCCCACCACCACCACCACCAGGGCCGGCGGCGGCTGC
AACCCCGAGGGACGGGGCCCTAGGCGGTGGCAATGGGGGCCGCCCGGATCGCGCCCGGCC
TGGCGCTCCTGCTCTGCTGTCCGGTGCTCAGCTCGGCATACGCGCTGGTGGATGCAGATG
ACGTCATGACCAAAGAGGAGCAGATCTTCCTGCTGCACCGTGCCCAGGCCCAATGTGAGA
AGCGGCTCAAAGAAGTCCTGCAGAGGCCAGCTGACATAATGGAATCAGACAAAGGATGGG
CATCTGCGCCCACATCAGGGAAGCCCAGGAAAGAGAAGGCATCTGGGAAGCTTTATCCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCAGCTCTCGGCGCCCGCCCGCCGACCGCCTGGCCCCGGGCTGCCTCCCTTCCTCCCTC
CCTCCCTCTCCCTTGCGCTCTCTCGTTCGCTAGCCCTCGGCGCATGGGCCCCGCGCCGGG
CCCCGGGGCCTCGGGCCGCCGGGCCTCCGGGGTCCCCTAGGCCCTAACGTGGGCGGGGCA
GCCCTGCCTGAGGCAGCTCTGTACCCCACCACCACCACCACCAGGGCCGGCGGCGGCTGC
AACCCCGAGGGACGGGGCCCTAGGCGGTGGCAATGGGGGCCGCCCGGATCGCGCCCGGCC
TGGCGCTCCTGCTCTGCTGTCCGGTGCTCAGCTCGGCATACGCGCTGGTGGATGCAGATG
ACGTCATGACCAAAGAGGAGCAGATCTTCCTGCTGCACCGTGCCCAGGCCCAATGTGAGA
AGCGGCTCAAAGAAGTCCTGCAGAGGCCAGCTGACATAATGGAATCAGACAAAGGATGGG
CATCTGCGCCCACATCAGGGAAGCCCAGGAAAGAGAAGGCATCTGGGAAGCTTTATCCTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|3342554|gb|AAC27643.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|3342554|gb|AAC27643.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               37-349, gnl|bosTau2|chr22 (40967788-40968103)
               

               
               37-349, gnl|Hg17|chr3 (46899804-46900130)
               

               
               37-349, gnl|Mm7|chr9 (110440234-110439926)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               37-349, gnl|bosTau2|chr22 (40967788-40968103)
               

               
               37-349, gnl|Hg17|chr3 (46899804-46900130)
               

               
               37-349, gnl|Mm7|chr9 (110440234-110439926)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nmm (0.132802)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)
               

               
               ebs (0.118301)

	37-349, gnl\|bosTau2\|chr22 (40967788-40968103)
	37-349, gnl\|Hg17\|chr3 (46899804-46900130)
	37-349, gnl\|Mm7\|chr9 (110440234-110439926)