Ss1.1-Liv1-LVRM1H030034.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAGGCCACAGAGGTAGAAGTTCCTTGTTTTCCAGGTACTAAAGGCTATAATCCCTAACT TTAAATACTGGAAGCTCCTGAGATCAAAGGGAAAGCAGGGTTACAGTGGGAGTACGTGGA GAGGAATCCAGCACCAGATTCTGTGGCCTGCAGGTGACGTGCTGCCTAAGAGGAACAGGG GCCTGTGACCACCATCCCAACACCTGAAGCCATGGCCAGCGGGGAAGATGAGCCAAGGAA CTGTGCTGTGTGCGGGGACCGAGCCACAGGCTATCACTTCCATGCCTTGACTTGTGAGGG CTGCAAGGGTTTCTTCAGGCGAACAGTCAACAAAAGCACCAGTCTCATCTGCCCCTTTGC TGGAAGCTGTAAGGTCAATAAGGCCCAGAGGCGCCACTGCCCAGCCTGCAGGTTGCAGAA GTGCCTAGATGCTGGCATGAAGAAAGACATGATCCTATCAGCAGAAGTCCTGGCATTGCG GCGAGCAAGACAGGTTCAGCGCCGGGCACAGCAAGCATCACTGCAGCTGAGTAAGGAGCA GAAGGCGTTAGTCCAGATACTCCTGGGGGCCCATACCCGCCATATGGGCACTATGTTTGA TCAGTTTGTGCAGTTCAGGCCTCCAGCTCATCTGTTCATCCATCACCAGCACTTGCCACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAGGCCACAGAGGTAGAAGTTCCTTGTTTTCCAGGTACTAAAGGCTATAATCCCTAACT TTAAATACTGGAAGCTCCTGAGATCAAAGGGAAAGCAGGGTTACAGTGGGAGTACGTGGA GAGGAATCCAGCACCAGATTCTGTGGCCTGCAGGTGACGTGCTGCCTAAGAGGAACAGGG GCCTGTGACCACCATCCCAACACCTGAAGCCATGGCCAGCGGGGAAGATGAGCCAAGGAA CTGTGCTGTGTGCGGGGACCGAGCCACAGGCTATCACTTCCATGCCTTGACTTGTGAGGG CTGCAAGGGTTTCTTCAGGCGAACAGTCAACAAAAGCACCAGTCTCATCTGCCCCTTTGC TGGAAGCTGTAAGGTCAATAAGGCCCAGAGGCGCCACTGCCCAGCCTGCAGGTTGCAGAA GTGCCTAGATGCTGGCATGAAGAAAGACATGATCCTATCAGCAGAAGTCCTGGCATTGCG GCGAGCAAGACAGGTTCAGCGCCGGGCACAGCAAGCATCACTGCAGCTGAGTAAGGAGCA GAAGGCGTTAGTCCAGATACTCCTGGGGGCCCATACCCGCCATATGGGCACTATGTTTGA TCAGTTTGTGCAGTTCAGGCCTCCAGCTCATCTGTTCATCCATCACCAGCACTTGCCACC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 3-179, gnl|bosTau2|chr3 (7567920-7568090) | |
| 3-179, gnl|canFam2|chr38 (24252738-24252585) | |
| 3-179, gnl|dasNov1|scaffold_9854 (56972-57140) | |
| 3-179, gnl|echTel1|scaffold_319928 (43523-43361) | |
| 3-179, gnl|hg17|chr1 (158020822-158021030) | |
| 3-179, gnl|Hg17|chr1 (158021080-158020903) | |
| 3-179, gnl|loxAfr1|scaffold_66698 (31650-31846) | |
| 3-179, gnl|mm7|chr1 (171184305-171184159) | |
| 3-179, gnl|Mm7|chr1 (171184107-171184267) | |
| 3-179, gnl|monDom2|scaffold_0 (28544141-28543978) | |
| 3-179, gnl|oryCun1|scaffold_179946 (56074-56234) | |
| 3-179, gnl|panTro1|chr1_random (27687849-27688059) | |
| 3-179, gnl|rheMac2|chr1 (139848033-139848241) | |
| 3-179, gnl|rn3|chr13 (87293037-87292848) | |
| 309-449, gnl|bosTau2|chr3 (7568912-7569052) | |
| 309-449, gnl|Hg17|chr1 (158018849-158018710) | |
| 309-449, gnl|Mm7|chr1 (171185022-171185167) | |
| 450-619, gnl|bosTau2|chr3 (7570194-7570363) | |
| 450-619, gnl|canFam2|chr38 (24254929-24254787) | |
| 450-619, gnl|danRer3|chr9 (11485061-11484921) | |
| 450-619, gnl|dasNov1|scaffold_9854 (54854-54995) | |
| 450-619, gnl|echTel1|scaffold_311345 (40871-40731) | |
| 450-619, gnl|galGal2|chrUn (139847643-139847784) | |
| 450-619, gnl|hg17|chr1 (158016007-158016147) | |
| 450-619, gnl|Hg17|chr1 (158016201-158016032) | |
| 450-619, gnl|loxAfr1|scaffold_66698 (29046-29186) | |
| 450-619, gnl|mm7|chr1 (171186670-171186528) | |
| 450-619, gnl|Mm7|chr1 (171186472-171186641) | |
| 450-619, gnl|monDom2|scaffold_0 (28546214-28546074) | |
| 450-619, gnl|oryCun1|scaffold_179946 (53653-53793) | |
| 450-619, gnl|panTro1|chr1_random (27682791-27682931) | |
| 450-619, gnl|rheMac2|chr1 (139843628-139843768) | |
| 450-619, gnl|rn3|chr13 (87295307-87295166) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-179, gnl|bosTau2|chr3 (7567920-7568090) | |
| 3-179, gnl|canFam2|chr38 (24252738-24252585) | |
| 3-179, gnl|dasNov1|scaffold_9854 (56972-57140) | |
| 3-179, gnl|echTel1|scaffold_319928 (43523-43361) | |
| 3-179, gnl|hg17|chr1 (158020822-158021030) | |
| 3-179, gnl|Hg17|chr1 (158021080-158020903) | |
| 3-179, gnl|loxAfr1|scaffold_66698 (31650-31846) | |
| 3-179, gnl|mm7|chr1 (171184305-171184159) | |
| 3-179, gnl|Mm7|chr1 (171184107-171184267) | |
| 3-179, gnl|monDom2|scaffold_0 (28544141-28543978) | |
| 3-179, gnl|oryCun1|scaffold_179946 (56074-56234) | |
| 3-179, gnl|panTro1|chr1_random (27687849-27688059) | |
| 3-179, gnl|rheMac2|chr1 (139848033-139848241) | |
| 3-179, gnl|rn3|chr13 (87293037-87292848) | |
| 309-449, gnl|bosTau2|chr3 (7568912-7569052) | |
| 309-449, gnl|Hg17|chr1 (158018849-158018710) | |
| 309-449, gnl|Mm7|chr1 (171185022-171185167) | |
| 450-619, gnl|bosTau2|chr3 (7570194-7570363) | |
| 450-619, gnl|canFam2|chr38 (24254929-24254787) | |
| 450-619, gnl|danRer3|chr9 (11485061-11484921) | |
| 450-619, gnl|dasNov1|scaffold_9854 (54854-54995) | |
| 450-619, gnl|echTel1|scaffold_311345 (40871-40731) | |
| 450-619, gnl|galGal2|chrUn (139847643-139847784) | |
| 450-619, gnl|hg17|chr1 (158016007-158016147) | |
| 450-619, gnl|Hg17|chr1 (158016201-158016032) | |
| 450-619, gnl|loxAfr1|scaffold_66698 (29046-29186) | |
| 450-619, gnl|mm7|chr1 (171186670-171186528) | |
| 450-619, gnl|Mm7|chr1 (171186472-171186641) | |
| 450-619, gnl|monDom2|scaffold_0 (28546214-28546074) | |
| 450-619, gnl|oryCun1|scaffold_179946 (53653-53793) | |
| 450-619, gnl|panTro1|chr1_random (27682791-27682931) | |
| 450-619, gnl|rheMac2|chr1 (139843628-139843768) | |
| 450-619, gnl|rn3|chr13 (87295307-87295166) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cli (0.152812) |