Ss1.1-Lng1-LNG010002B06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATCTTTGTGCGGGGCTGCGCTTCCGCCGGCGCAGCGGCGGGGCCTCCGCAGTGGGTCGGC TGGCGATGGAGCGGTGGGCGCTCTCACATCTTCGGTTGTGGCTGCTGTTGCTCCTCCTGC TCCCGGTGCCGGGCCGCCAAAAGGAGTCAGGTTCGAAATGGAAAGTACTTATTGACCAAA TTAACAGAGCTTTGGAAAATTATGAACCATGTTCAAGTCAAAACTGCAGCTGCTACCATG GTGTCATAGAAGAAGATCTGACTCCTTTCCGAGGAGGTATCTCCAGGAAGATGATGGCGG AGGTAGTCAGACGGAAACTAGGGACCCACTATCAGATCATTAAGAACAGATTATACCGAG AAAGTGACTGCATGTTCCCTTCAAGGTGTAGTGGTGTCGAACACTTTATTTTGGAAGTTA TGGGGCGCCTCCCTGACATGGAGATGGTGATCAATGTACGAGATTATCCTCAGGTTCCTA AATGGATGGAGCCTGCCATTCCAGTCTTCTCCTTCAGTAAGACATCAGAGTACCATGACA TCATGTATCCTGCTTGGACATTTTGGGAAGGAGGACCTGCTGTTTGGCCGATTTATCCTA CAGGTCTTGGACGCTGGGACCTCTTCAGAGAAGATCTGCTAAAGTCAGCAGCCCAATGGC CATGGGAAAAGAAAAACTCCACAGCGTATTTCCGAGGATCAAGGACAAGTCCAGAACGAG ATCCTCTCATTCTTCTATCTCGGAAAAATCCGAAGCTTGTTGATGCAGAGTACACCAAAA ATCAGGCCTGGAAATCTATGCAAGATACCTTGGGAAAGCCAGCTGCCAAGGATGTCCATC TTGTGGATCACTGCAAATACAAGTATCTGTTTAATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATCTTTGTGCGGGGCTGCGCTTCCGCCGGCGCAGCGGCGGGGCCTCCGCAGTGGGTCGGC TGGCGATGGAGCGGTGGGCGCTCTCACATCTTCGGTTGTGGCTGCTGTTGCTCCTCCTGC TCCCGGTGCCGGGCCGCCAAAAGGAGTCAGGTTCGAAATGGAAAGTACTTATTGACCAAA TTAACAGAGCTTTGGAAAATTATGAACCATGTTCAAGTCAAAACTGCAGCTGCTACCATG GTGTCATAGAAGAAGATCTGACTCCTTTCCGAGGAGGTATCTCCAGGAAGATGATGGCGG AGGTAGTCAGACGGAAACTAGGGACCCACTATCAGATCATTAAGAACAGATTATACCGAG AAAGTGACTGCATGTTCCCTTCAAGGTGTAGTGGTGTCGAACACTTTATTTTGGAAGTTA TGGGGCGCCTCCCTGACATGGAGATGGTGATCAATGTACGAGATTATCCTCAGGTTCCTA AATGGATGGAGCCTGCCATTCCAGTCTTCTCCTTCAGTAAGACATCAGAGTACCATGACA TCATGTATCCTGCTTGGACATTTTGGGAAGGAGGACCTGCTGTTTGGCCGATTTATCCTA CAGGTCTTGGACGCTGGGACCTCTTCAGAGAAGATCTGCTAAAGTCAGCAGCCCAATGGC CATGGGAAAAGAAAAACTCCACAGCGTATTTCCGAGGATCAAGGACAAGTCCAGAACGAG ATCCTCTCATTCTTCTATCTCGGAAAAATCCGAAGCTTGTTGATGCAGAGTACACCAAAA ATCAGGCCTGGAAATCTATGCAAGATACCTTGGGAAAGCCAGCTGCCAAGGATGTCCATC TTGTGGATCACTGCAAATACAAGTATCTGTTTAATT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 1-152, gnl|bosTau2|chr1 (41193843-41193994) | |
| 1-152, gnl|canFam2|chr33 (26163003-26163328) | |
| 1-152, gnl|dasNov1|scaffold_6342 (48045-48396) | |
| 1-152, gnl|echTel1|scaffold_312353 (43177-43366) | |
| 1-152, gnl|hg17|chr3 (120670491-120670839) | |
| 1-152, gnl|Hg17|chr3 (120670494-120670645) | |
| 1-152, gnl|loxAfr1|scaffold_221268 (568-199) | |
| 1-152, gnl|mm7|chr16 (38261365-38261033) | |
| 1-152, gnl|Mm7|chr16 (38261360-38261211) | |
| 1-152, gnl|monDom2|scaffold_24 (16039110-16039513) | |
| 1-152, gnl|oryCun1|scaffold_176384 (9469-9179) | |
| 1-152, gnl|panTro1|chr2 (122392980-122393328) | |
| 1-152, gnl|rheMac2|chr2 (39501081-39501429) | |
| 1-152, gnl|rn3|chr11 (64033468-64033800) | |
| 241-387, gnl|bosTau2|chr1 (41196317-41196463) | |
| 241-387, gnl|Hg17|chr3 (120672845-120672991) | |
| 241-387, gnl|Mm7|chr16 (38259712-38259566) | |
| 508-645, gnl|bosTau2|chr1 (41203415-41203554) | |
| 508-645, gnl|Hg17|chr3 (120681572-120681711) | |
| 508-645, gnl|Mm7|chr16 (38254105-38253966) | |
| 702-804, gnl|bosTau2|chr1 (41211179-41211281) | |
| 702-804, gnl|canFam2|chr33 (26182335-26182463) | |
| 702-804, gnl|dasNov1|scaffold_104947 (2735-2863) | |
| 702-804, gnl|echTel1|scaffold_262758 (7594-7468) | |
| 702-804, gnl|fr1|chrUn (189212070-189212200) | |
| 702-804, gnl|galGal2|chr1 (86193729-86193613) | |
| 702-804, gnl|hg17|chr3 (120688347-120688475) | |
| 702-804, gnl|Hg17|chr3 (120688368-120688470) | |
| 702-804, gnl|loxAfr1|scaffold_9324 (61615-61487) | |
| 702-804, gnl|mm7|chr16 (38242319-38242191) | |
| 702-804, gnl|Mm7|chr16 (38242296-38242194) | |
| 702-804, gnl|monDom2|scaffold_24 (16057280-16057408) | |
| 702-804, gnl|oryCun1|scaffold_197612 (9784-9912) | |
| 702-804, gnl|panTro1|chr2 (122411156-122411284) | |
| 702-804, gnl|rheMac2|chr2 (39519261-39519389) | |
| 702-804, gnl|rn3|chr11 (64053528-64053656) | |
| 702-804, gnl|tetNig1|chr3 (3677815-3677931) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-152, gnl|bosTau2|chr1 (41193843-41193994) | |
| 1-152, gnl|canFam2|chr33 (26163003-26163328) | |
| 1-152, gnl|dasNov1|scaffold_6342 (48045-48396) | |
| 1-152, gnl|echTel1|scaffold_312353 (43177-43366) | |
| 1-152, gnl|hg17|chr3 (120670491-120670839) | |
| 1-152, gnl|Hg17|chr3 (120670494-120670645) | |
| 1-152, gnl|loxAfr1|scaffold_221268 (568-199) | |
| 1-152, gnl|mm7|chr16 (38261365-38261033) | |
| 1-152, gnl|Mm7|chr16 (38261360-38261211) | |
| 1-152, gnl|monDom2|scaffold_24 (16039110-16039513) | |
| 1-152, gnl|oryCun1|scaffold_176384 (9469-9179) | |
| 1-152, gnl|panTro1|chr2 (122392980-122393328) | |
| 1-152, gnl|rheMac2|chr2 (39501081-39501429) | |
| 1-152, gnl|rn3|chr11 (64033468-64033800) | |
| 241-387, gnl|bosTau2|chr1 (41196317-41196463) | |
| 241-387, gnl|Hg17|chr3 (120672845-120672991) | |
| 241-387, gnl|Mm7|chr16 (38259712-38259566) | |
| 508-645, gnl|bosTau2|chr1 (41203415-41203554) | |
| 508-645, gnl|Hg17|chr3 (120681572-120681711) | |
| 508-645, gnl|Mm7|chr16 (38254105-38253966) | |
| 702-804, gnl|bosTau2|chr1 (41211179-41211281) | |
| 702-804, gnl|canFam2|chr33 (26182335-26182463) | |
| 702-804, gnl|dasNov1|scaffold_104947 (2735-2863) | |
| 702-804, gnl|echTel1|scaffold_262758 (7594-7468) | |
| 702-804, gnl|fr1|chrUn (189212070-189212200) | |
| 702-804, gnl|galGal2|chr1 (86193729-86193613) | |
| 702-804, gnl|hg17|chr3 (120688347-120688475) | |
| 702-804, gnl|Hg17|chr3 (120688368-120688470) | |
| 702-804, gnl|loxAfr1|scaffold_9324 (61615-61487) | |
| 702-804, gnl|mm7|chr16 (38242319-38242191) | |
| 702-804, gnl|Mm7|chr16 (38242296-38242194) | |
| 702-804, gnl|monDom2|scaffold_24 (16057280-16057408) | |
| 702-804, gnl|oryCun1|scaffold_197612 (9784-9912) | |
| 702-804, gnl|panTro1|chr2 (122411156-122411284) | |
| 702-804, gnl|rheMac2|chr2 (39519261-39519389) | |
| 702-804, gnl|rn3|chr11 (64053528-64053656) | |
| 702-804, gnl|tetNig1|chr3 (3677815-3677931) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fty (0.17584) | |
| nca (0.136874) | |
| bla (0.124347) | |
| ldo (0.0970026) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) | |
| nca (0.136874) | |
| bla (0.124347) | |
| ldo (0.0970026) |