Ss1.1-Lng1-LNG010002D04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACTAAACCAGCTGCTGGGAGAGGTGAAGGATCTTCTGAGACAACAGGTCAAGGAAACAT CATTTTTGCGAAACACCATAGCTGAATGCCAGGCTTGCGGTCCTCTCAGCTTTCAGTCTC CAACCCCAAACACCCTGGTGGCCCCCGCACCCCCAGCCTCCCCGACACCCCCCGTGCGCC GGTGTGACTCCAACCCGTGCTTCCGCGACGTCCGATGCACTGACACCAGAGACGGCTTTC AGTGTGGGCCCTGCCCCGAGGGCTACACAGGAAATGGGGTCACCTGTTCTGACGTGGATG AGTGCAGATACCATCCCTGCTACCAGGCGTGCGCTGCGTGAACTTGGCTCCTGGCTTCAG ATGTGACGCCTGCCCAGTGGGCTTCACGGGGCCCACAGTGCAGGGTGTTGGGATCAACTT TGCCAAGACAAACAAGCAGGTCTGCACAGATATTGATGAGTGTCGAAACGGAGCATGTGT TCTCAATTCTATCTGTGTTAACACCTTGGGATCTTACCGCTGCGGGCCTTGTAAACCAGG GTACATCGGGGATCAGATGAGGGGCTGCAAAATGGAGAGAAACTGCAGAAATCCAGAGCT GAACCCTTGCAGTGTGAACGCGCAGTGTATCGAAGAGAGGCAGGGGGATGTGACGTGCGT GTGTGGGGTCGGCTGGGCTGGTGATGGCTACATCTGTGGAAAAGACGTGGACATCGACAG TTACCCAGACGAAGAACTGCCGTGCTCTGCCAGAAACTGCAAAAAAGACAACTGCAAGTA CGTGCCAAATTCTGGTCAAGAAGATGCAGACAGAGATGGCATCGGAGATGCTTGTGACGA GGATGCTGATGGAGATGGGATCCTGAATGAGCANGATAACTGTGTCCCTGACCACAACAT GGATCAGAGGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACTAAACCAGCTGCTGGGAGAGGTGAAGGATCTTCTGAGACAACAGGTCAAGGAAACAT CATTTTTGCGAAACACCATAGCTGAATGCCAGGCTTGCGGTCCTCTCAGCTTTCAGTCTC CAACCCCAAACACCCTGGTGGCCCCCGCACCCCCAGCCTCCCCGACACCCCCCGTGCGCC GGTGTGACTCCAACCCGTGCTTCCGCGACGTCCGATGCACTGACACCAGAGACGGCTTTC AGTGTGGGCCCTGCCCCGAGGGCTACACAGGAAATGGGGTCACCTGTTCTGACGTGGATG AGTGCAGATACCATCCCTGCTACCAGGCGTGCGCTGCGTGAACTTGGCTCCTGGCTTCAG ATGTGACGCCTGCCCAGTGGGCTTCACGGGGCCCACAGTGCAGGGTGTTGGGATCAACTT TGCCAAGACAAACAAGCAGGTCTGCACAGATATTGATGAGTGTCGAAACGGAGCATGTGT TCTCAATTCTATCTGTGTTAACACCTTGGGATCTTACCGCTGCGGGCCTTGTAAACCAGG GTACATCGGGGATCAGATGAGGGGCTGCAAAATGGAGAGAAACTGCAGAAATCCAGAGCT GAACCCTTGCAGTGTGAACGCGCAGTGTATCGAAGAGAGGCAGGGGGATGTGACGTGCGT GTGTGGGGTCGGCTGGGCTGGTGATGGCTACATCTGTGGAAAAGACGTGGACATCGACAG TTACCCAGACGAAGAACTGCCGTGCTCTGCCAGAAACTGCAAAAAAGACAACTGCAAGTA CGTGCCAAATTCTGGTCAAGAAGATGCAGACAGAGATGGCATCGGAGATGCTTGTGACGA GGATGCTGATGGAGATGGGATCCTGAATGAGCANGATAACTGTGTCCCTGACCACAACAT GGATCAGAGGAA |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 99-302, gnl|bosTau2|chr10 (5042519-5042316) | |
| 99-302, gnl|Hg17|chr5 (79391281-79391484) | |
| 99-302, gnl|Mm7|chr13 (89837278-89837075) | |
| 508-661, gnl|bosTau2|chr10 (5035718-5035565) | |
| 508-661, gnl|canFam2|chr3 (29843381-29843193) | |
| 508-661, gnl|danRer3|chr5 (57159758-57159567) | |
| 508-661, gnl|dasNov1|scaffold_73 (21465-21277) | |
| 508-661, gnl|echTel1|scaffold_317528 (85434-85622) | |
| 508-661, gnl|fr1|chrUn (181118299-181118130) | |
| 508-661, gnl|galGal2|chrZ (5255371-5255193) | |
| 508-661, gnl|hg17|chr5 (79399524-79399712) | |
| 508-661, gnl|Hg17|chr5 (79399551-79399704) | |
| 508-661, gnl|loxAfr1|scaffold_9198 (21724-21536) | |
| 508-661, gnl|mm7|chr13 (89829729-89829542) | |
| 508-661, gnl|Mm7|chr13 (89829701-89829548) | |
| 508-661, gnl|monDom2|scaffold_27 (35808997-35808806) | |
| 508-661, gnl|oryCun1|scaffold_173728 (56578-56746) | |
| 508-661, gnl|panTro1|chr4 (35787150-35786962) | |
| 508-661, gnl|rheMac2|chr6 (76272386-76272574) | |
| 508-661, gnl|rn3|chr2 (22947174-22946987) | |
| 508-661, gnl|tetNig1|chr4 (3924427-3924606) | |
| 508-661, gnl|xenTro1|scaffold_183 (1249207-1249022) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 99-302, gnl|bosTau2|chr10 (5042519-5042316) | |
| 99-302, gnl|Hg17|chr5 (79391281-79391484) | |
| 99-302, gnl|Mm7|chr13 (89837278-89837075) | |
| 508-661, gnl|bosTau2|chr10 (5035718-5035565) | |
| 508-661, gnl|canFam2|chr3 (29843381-29843193) | |
| 508-661, gnl|danRer3|chr5 (57159758-57159567) | |
| 508-661, gnl|dasNov1|scaffold_73 (21465-21277) | |
| 508-661, gnl|echTel1|scaffold_317528 (85434-85622) | |
| 508-661, gnl|fr1|chrUn (181118299-181118130) | |
| 508-661, gnl|galGal2|chrZ (5255371-5255193) | |
| 508-661, gnl|hg17|chr5 (79399524-79399712) | |
| 508-661, gnl|Hg17|chr5 (79399551-79399704) | |
| 508-661, gnl|loxAfr1|scaffold_9198 (21724-21536) | |
| 508-661, gnl|mm7|chr13 (89829729-89829542) | |
| 508-661, gnl|Mm7|chr13 (89829701-89829548) | |
| 508-661, gnl|monDom2|scaffold_27 (35808997-35808806) | |
| 508-661, gnl|oryCun1|scaffold_173728 (56578-56746) | |
| 508-661, gnl|panTro1|chr4 (35787150-35786962) | |
| 508-661, gnl|rheMac2|chr6 (76272386-76272574) | |
| 508-661, gnl|rn3|chr2 (22947174-22946987) | |
| 508-661, gnl|tetNig1|chr4 (3924427-3924606) | |
| 508-661, gnl|xenTro1|scaffold_183 (1249207-1249022) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (0.132802) | |
| eep (0.122564) |