Non-Coding RNA Search

Ss1.1-Lng1-LNG010002G11.5

Sequence:


               
               GTTCAGTCACTGGGATAAGTGGCTGTCACGGCGTTTCCAGAAGGTTTGAGAAGGCTGTGG
GGGGCAGGGCAGTGGATGTGGTGGGGGTGGGGAGGACAGGTTGGGCACCTGTGCTCTGGG
GAAGCCCAGGAACCTGATATAGCTGCTCTCTGGACCCTGTTGGGGGTTGGTGGTGCTCGG
GCCCGGGTGGGGAGAAGCAGCTTTAGAGACAGAAGGCCAGGCTGCGTCCGATGGAGTTCA
GCCTGTGGGATGTGGGATGGGTGTCCCAGGGAGTATTCGGCAGCGGGAGCTCAAATGGCT
GGAGATGTTCAGTCACTGGGATAAGTGGCTGTCACGGCGTTTCCAGAAGGTGAAGCTGCG
CTGCCGGAAGGGGATTCCCTCCTCCCTCAGAGCCAAGGCCTGGCAGTACCTGTCCAATAG
CAAGGAGCTCCTGGAGCAGAACCCGGGCAAGTTTGAGGAGCTGGAACGGGCTCCAGGGGA
CCCTAAGTGGCTGGACGTGATTGAGAAGGACCTGCACCGCCAGTTCCCGTTCCACGAGAT
GTTTGCTGCTCGAGGCGGGCATGGGTAAGGTGACCTGACTCTGTGAGTCAGTGGTGGATA
CGGGGCTGGGTTGAAGTCCCGGCCGGCTGAGTTCTTGCCTTCCAGGACGTCTACAGGAGT
GGTCCTTGATGGACTGATGTCAAGCCATGCTGAAGGACGTGTCATGGGAGGGAGGCTGCC
TCAGGGCGATGGGGGTGGGTGTGGGTGAGGGACAGGGAGGCACACCAAGGCCTCGTTGAA
GATGCTGCGATTGAGCTGGGTTTTGAAGGGTAGATGGCAGTAGAGCAAGAGGCAGGTTTT
TCCTGGCTGGGGGGCTGTGTAAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCAGTCACTGGGATAAGTGGCTGTCACGGCGTTTCCAGAAGGTTTGAGAAGGCTGTGG
GGGGCAGGGCAGTGGATGTGGTGGGGGTGGGGAGGACAGGTTGGGCACCTGTGCTCTGGG
GAAGCCCAGGAACCTGATATAGCTGCTCTCTGGACCCTGTTGGGGGTTGGTGGTGCTCGG
GCCCGGGTGGGGAGAAGCAGCTTTAGAGACAGAAGGCCAGGCTGCGTCCGATGGAGTTCA
GCCTGTGGGATGTGGGATGGGTGTCCCAGGGAGTATTCGGCAGCGGGAGCTCAAATGGCT
GGAGATGTTCAGTCACTGGGATAAGTGGCTGTCACGGCGTTTCCAGAAGGTGAAGCTGCG
CTGCCGGAAGGGGATTCCCTCCTCCCTCAGAGCCAAGGCCTGGCAGTACCTGTCCAATAG
CAAGGAGCTCCTGGAGCAGAACCCGGGCAAGTTTGAGGAGCTGGAACGGGCTCCAGGGGA
CCCTAAGTGGCTGGACGTGATTGAGAAGGACCTGCACCGCCAGTTCCCGTTCCACGAGAT
GTTTGCTGCTCGAGGCGGGCATGGGTAAGGTGACCTGACTCTGTGAGTCAGTGGTGGATA
CGGGGCTGGGTTGAAGTCCCGGCCGGCTGAGTTCTTGCCTTCCAGGACGTCTACAGGAGT
GGTCCTTGATGGACTGATGTCAAGCCATGCTGAAGGACGTGTCATGGGAGGGAGGCTGCC
TCAGGGCGATGGGGGTGGGTGTGGGTGAGGGACAGGGAGGCACACCAAGGCCTCGTTGAA
GATGCTGCGATTGAGCTGGGTTTTGAAGGGTAGATGGCAGTAGAGCAAGAGGCAGGTTTT
TCCTGGCTGGGGGGCTGTGTAAGC

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

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               1-236, gnl|bosTau2|chr25 (24425063-24425299)
               

               
               1-236, gnl|Hg17|chr16 (30284359-30284110)
               

               
               1-236, gnl|Mm7|chr7 (123300341-123300115)
               


               
               456-864, gnl|bosTau2|chr25 (24425583-24425998)
               

               
               456-864, gnl|Hg17|chr16 (30283830-30283421)
               

               
               456-864, gnl|Mm7|chr7 (123299838-123299454)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-236, gnl|bosTau2|chr25 (24425063-24425299)
               

               
               1-236, gnl|Hg17|chr16 (30284359-30284110)
               

               
               1-236, gnl|Mm7|chr7 (123300341-123300115)
               


               
               456-864, gnl|bosTau2|chr25 (24425583-24425998)
               

               
               456-864, gnl|Hg17|chr16 (30283830-30283421)
               

               
               456-864, gnl|Mm7|chr7 (123299838-123299454)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	1-236, gnl\|bosTau2\|chr25 (24425063-24425299)
	1-236, gnl\|Hg17\|chr16 (30284359-30284110)
	1-236, gnl\|Mm7\|chr7 (123300341-123300115)

	456-864, gnl\|bosTau2\|chr25 (24425583-24425998)
	456-864, gnl\|Hg17\|chr16 (30283830-30283421)
	456-864, gnl\|Mm7\|chr7 (123299838-123299454)