Non-Coding RNA Search

Ss1.1-Lng1-LNG010003C09.5

Sequence:


               
               CTTCCCTCTATCAGGGGCCTCTCTCCCTTTCGTTTGGGTGCTGCCACCTCTGTAGCTCTG
AGATTCGTTGTTCACCATCCCCCACCCGGCTGCTGGCAGTCTTGCTTCTCCAAGACGTCA
GATTGCATGGGGCTTGGCGAGGCCGGGGCCAAGGCAGCTGGACCCGCTCAGGAGCTCCCA
GGGCGCTCTGCACACCACCTCCTCTGAGGAAGATCTGTAGGCCGTTTTGTTTCTCTCCTT
CTCCTGTCGCCAGGGAGACCCAGCCTTCGACCGTAGGGTCAGTTTGTGTGAACTGAAGGG
GGGGACAGGCGAGCCTGAAGTTCCTGATCACCTGCTCAGGAAAGGGAGCAGAAACGTGGG
CAAGGAGGGAAAGCAGGCAGACAGGCGGTGTAGACCACAAACCGAGAGACTTCACAAAAT
GTCTAAAACTGTCCTGTGTTTATCTTTGCCTACCTGTTAACCCGTTAACTGTCAAGTTTA
AAATGGAAGAGGACTGACTTAATATGACAGAGTCCTCAGGAAAATAGTAATAAGGGAGTA
AAAAGGGATAAACTCCGAGTAGTGAAAAGAATATGGTAGAAGTTAGTTAGCTGATGAGAT
TTCAGCAGATTCTAAAATACACACAGCACCTGGATGAGGCCTGACTCCAGGAGGCAGGTG
AGCTGCAGCCGGACTCCTCCCAGCCGGCTCCTCAGCAGAGGCAACAGCCTGCCCACTAGA
AGGACCCCAGCGAGTAGGAAAAGAGATGGGTTTTAACTGAGGTGTAAATGCAGGCCAGTC
ACCCTCCCCCCACCCCTTGTACAGTGTGTAGGAAGCCCGCAGAGCCAGAAGGCAGAACCA
GAGCAGACAGAAGAGAATTGGACCCTGAGTAGAAGCCCCCGCTCACTGAAGGACTGGCTC
CCTCATTCTGACACTGGCTCTCCACAGGGTCATTGGCCCACCCCCACCCCATAAGGGGTA
TTTGGCAGGGCCTGGAGAGCTTGCAGTTGGTCTCACTTGGAGGTAGAAAGTGCTACTGGC
ATCTAATAGGCAGAGGCCCTAGATGCTGCTAAACATCCTACAACGCACAGACAGGCCCCA
CAACGGAGAATTAACCAGCTCCAAAATGCAATGGTGTTGGGTTCCCGCTGTGGCTCAACA
GAATTGGCAGTATCCCTGGAGCACTGGGATGCAGGTTCAGTCCCCAGCCCAGCACAGTGG
GTTAAGGATCCTCTGTAGGTCGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCCCTCTATCAGGGGCCTCTCTCCCTTTCGTTTGGGTGCTGCCACCTCTGTAGCTCTG
AGATTCGTTGTTCACCATCCCCCACCCGGCTGCTGGCAGTCTTGCTTCTCCAAGACGTCA
GATTGCATGGGGCTTGGCGAGGCCGGGGCCAAGGCAGCTGGACCCGCTCAGGAGCTCCCA
GGGCGCTCTGCACACCACCTCCTCTGAGGAAGATCTGTAGGCCGTTTTGTTTCTCTCCTT
CTCCTGTCGCCAGGGAGACCCAGCCTTCGACCGTAGGGTCAGTTTGTGTGAACTGAAGGG
GGGGACAGGCGAGCCTGAAGTTCCTGATCACCTGCTCAGGAAAGGGAGCAGAAACGTGGG
CAAGGAGGGAAAGCAGGCAGACAGGCGGTGTAGACCACAAACCGAGAGACTTCACAAAAT
GTCTAAAACTGTCCTGTGTTTATCTTTGCCTACCTGTTAACCCGTTAACTGTCAAGTTTA
AAATGGAAGAGGACTGACTTAATATGACAGAGTCCTCAGGAAAATAGTAATAAGGGAGTA
AAAAGGGATAAACTCCGAGTAGTGAAAAGAATATGGTAGAAGTTAGTTAGCTGATGAGAT
TTCAGCAGATTCTAAAATACACACAGCACCTGGATGAGGCCTGACTCCAGGAGGCAGGTG
AGCTGCAGCCGGACTCCTCCCAGCCGGCTCCTCAGCAGAGGCAACAGCCTGCCCACTAGA
AGGACCCCAGCGAGTAGGAAAAGAGATGGGTTTTAACTGAGGTGTAAATGCAGGCCAGTC
ACCCTCCCCCCACCCCTTGTACAGTGTGTAGGAAGCCCGCAGAGCCAGAAGGCAGAACCA
GAGCAGACAGAAGAGAATTGGACCCTGAGTAGAAGCCCCCGCTCACTGAAGGACTGGCTC
CCTCATTCTGACACTGGCTCTCCACAGGGTCATTGGCCCACCCCCACCCCATAAGGGGTA
TTTGGCAGGGCCTGGAGAGCTTGCAGTTGGTCTCACTTGGAGGTAGAAAGTGCTACTGGC
ATCTAATAGGCAGAGGCCCTAGATGCTGCTAAACATCCTACAACGCACAGACAGGCCCCA
CAACGGAGAATTAACCAGCTCCAAAATGCAATGGTGTTGGGTTCCCGCTGTGGCTCAACA
GAATTGGCAGTATCCCTGGAGCACTGGGATGCAGGTTCAGTCCCCAGCCCAGCACAGTGG
GTTAAGGATCCTCTGTAGGTCGCA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               202-730, gnl|bosTau2|chr19 (42954156-42953650)
               


               
               834-1119, gnl|bosTau2|chr19 (42953315-42953019)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               202-730, gnl|bosTau2|chr19 (42954156-42953650)
               


               
               834-1119, gnl|bosTau2|chr19 (42953315-42953019)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               spl (0.143184)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               med (0.116252)

	202-730, gnl\|bosTau2\|chr19 (42954156-42953650)

	834-1119, gnl\|bosTau2\|chr19 (42953315-42953019)